T-COFFEE, Version_11.00.d625267 (2016-01-11 15:25:41 - Revision d625267 - Build 507) Cedric Notredame SCORE=95 * BAD AVG GOOD * JXSJ01000652.1_ : 95 JXSJ01000652.1_ : 95 cons : 9 JXSJ01000652.1_ GTGTCAAAAACGTGTAGACCGACGGAGTTCAGCTGCGCCGACCGCCTTAACCAATGTGTGCCG JXSJ01000652.1_ GTGTCAAAAACGTGTAGACCGACGGAGTTCAGCTGCGCCGACCGCCTTAACCAATGTGTGCCG cons *************************************************************** JXSJ01000652.1_ AACAGTTGGCGCTGTGATGGAAAAGCTGACTGTGAGAATGGAGCTGATGAAGAGAGCTGTAAG JXSJ01000652.1_ AACAGTTGGCGCTGTGATGGAAAAGCTGACTGTGAGAATGGAGCTGATGAAGAGAGCTGTAAG cons *************************************************************** JXSJ01000652.1_ CAGTGCACAACCACAGAGTTTCGCTGCAGCAGCGGCCAGTGCGTGTCGTCCTCCTTCGTGTGC JXSJ01000652.1_ CAGTGCACAACCACAGAGTTTCGCTGCAGCAGCGGCCAGTGCGTGTCGTCCTCCTTCGTGTGC cons *************************************************************** JXSJ01000652.1_ GACGACGAGGCGGACTGTGACGACGGCAGCGACGAGGCCTCCTGCCCGCCTGTCACTTGCACC JXSJ01000652.1_ GATGACGAGGCGGACTGTGACGACGGCAGCGACGAGGCCTCCTGCCCGCCTGTCACTTGCACC cons ** ************************************************************ JXSJ01000652.1_ TCCACGTCCTTCCAGTGCAACAACACCGTTTGCGTTCCGCGCCTGTGGGTTTGCGACGGCGAA JXSJ01000652.1_ TCCACGTCCTTCCAGTGCAACAACACCGTTTGCGTTCCGCGCCTGTGGGTTTGCGACGGCGAA cons *************************************************************** JXSJ01000652.1_ AGCGACTGCACCGACGGCTCGGATGAGTGGCCCCAGAACTGCGGCTCCAATGAATGCCTGTAC JXSJ01000652.1_ AGCGACTGCACCGACGGCTCGGATGAGTGGCCCCAGAACTGCGGCTCCAATGAATGCCTGTAC cons *************************************************************** JXSJ01000652.1_ AGCAACGGTGGTTGCTCTCACATTTGCAATGACCTGAAGATCGGCTATGAGTGCCTATGCCCC JXSJ01000652.1_ AGCAACGGTGGTTGCTCTCACATTTGCAATGACCTGAAGATCGGCTATGAGTGCCTATGCCCC cons *************************************************************** JXSJ01000652.1_ ACTGGATATCGCCTGGTTGACAAAAAACGCTGTGAAGATATCGATGAGTGTGCTGACCCGGAC JXSJ01000652.1_ ACTGGATATCGCCTGGTTGACAAAAAACGCTGCGAAGATATCGATGAGTGTGCTGACCCGGAC cons ******************************** ****************************** JXSJ01000652.1_ ACCTGCAGCCAAATCTGCATCAACCAGATCGGCAGCTACAAATGCCAGTGCGAGGAGGGTTAC JXSJ01000652.1_ ACCTGCAGCCAAATCTGCATCAACCAGATCGGCAGCTACAAATGCCAGTGCGAGGAGGGTTAC cons *************************************************************** JXSJ01000652.1_ CAAGTTGACCCAGCAACCAAAGCCTGCAAGGCCATCGGTACAGTAGCCTACCTTTTCTTCACC JXSJ01000652.1_ CAAGTTGACCCAGCAACCAAAGCCTGCAAGGCCATCGGTAAA--------------------- cons **************************************** * JXSJ01000652.1_ AATCGTCATGAAGTAAGAAAGATGACTTTGGACAAAAGCGAGTACGCCAGAGTGATCCCCCGT JXSJ01000652.1_ --------------------------------------------------------------- cons JXSJ01000652.1_ CTAAAGAACGTTGTGTCTCTCGACATGAACATGGCCACCAACGAGATCTATTGGTCGGACATC JXSJ01000652.1_ --------------------------------------------------------------- cons JXSJ01000652.1_ TCCCAAAAGAAGATTTACAGAGCTCAGATGGACTCGGCCGAAGACTCCACTCAGCACAGCACT JXSJ01000652.1_ --------------------------------------------------------------- cons JXSJ01000652.1_ GTCATGGATAGCGACATTGACGCCCCTGAAGGCATTGCATTTGACTGGATCCATGGCAACTTG JXSJ01000652.1_ --------TAG---------------------------------------------------- cons *** JXSJ01000652.1_ TATTGGACTGACAGCATTCGCAGCACCATCTCTGTGGTAACCGCTGATGGTCAGCGTCGCAAG JXSJ01000652.1_ --------------------CAGC------TCT------------------------------ cons **** *** JXSJ01000652.1_ ACTCTCTTCCACCGAGACTTAACGAAACCCCGTGCTATCGTGGTCGACCCCCACAGCAACTTC JXSJ01000652.1_ ------------------------------------A-------------------------- cons * JXSJ01000652.1_ ATTTACTGGACAGACTGGGGGAATCCAGCTAAGATCGAGAAGGCAGGTCTCAACGGAGGGGAT JXSJ01000652.1_ -TT------------------------------------------------------------ cons ** JXSJ01000652.1_ CGCACTGCTCTGGTCACGGACAACATTGTGTGGCCTAACGGGATTACACTTGACCAGCTGAAC JXSJ01000652.1_ -----------TGTC------------------------------------------------ cons *** JXSJ01000652.1_ CAGCGGCTCTACTGGGTGGACTCTAAGCTGCACACCCTCTCCAGTATCGATGTGCAGGGCGGT JXSJ01000652.1_ ---------------------------------------T----------------------- cons * JXSJ01000652.1_ GGTCGACGCACCCTCATCATTGATGAAGACAAGCTGGCTCACCCACTGGGACTCACTGTGTTT JXSJ01000652.1_ ------------------------------------------------------TTTG--T-- cons ** * JXSJ01000652.1_ GAGGAAAGAGTTTTCTGGACGGACGTCAGTAATAACGCCATCCTCAGTGCAAACAGGCTGACG JXSJ01000652.1_ -------------------------------------------T------------------- cons * JXSJ01000652.1_ GGTGGTGACATTACACCATTGGCAGAGCACCTGGCATCCCCAGAAGACATTATTCTTTACCAT JXSJ01000652.1_ ----------------------------------------CAGA------------------- cons **** JXSJ01000652.1_ AACCTCAAACAACCGGCTGGCAGAGATTGGTGTCAGGTATCCGCCTGTGAATTCATGTGTTTG JXSJ01000652.1_ --------------------------------------------------------------- cons JXSJ01000652.1_ GGAGCTCCTCAAGTGGGAAGACATCCGCCCAAATACACCTGTGTCTGTCCAGATAACATGATG JXSJ01000652.1_ -----------------------------------------------------A--------- cons JXSJ01000652.1_ CTAGCCAGGGATATGAGGACATGTGTACCTGGTATGTAAATCACCAAAGAGTAAACATACTGT JXSJ01000652.1_ -AA-------------GGA------------------------------------------AA cons * *** JXSJ01000652.1_ AGTGTAATACAGAGGTCAACCATCATATCTCATCTCTCTTTATATCTTCCCCATTTAGCCATC JXSJ01000652.1_ AG------------------C------------------------------------------ cons ** * JXSJ01000652.1_ ATTTGTCTGGTGGCTGTTGGTGCCGTGCTGCTATGGAGGAGCTACAGGTTGAAGAACACCAAC JXSJ01000652.1_ ---------------------------------------------AG---------------- cons ** JXSJ01000652.1_ ACGATTCACTTTGACAACCCGGTCTATCAGAAAACTACTGAGGACCAA JXSJ01000652.1_ -------------A-------------------------------CAA cons * ***