------- SECIS element -- id:1 -- grade:A ---- Chromosome = JXSJ01000073.1:subseq_462657,118303_ Strand = - Positions = 47947 - 47874 Found by: Infernal (score=40.12) Covels (score=41.09) Stem2 length = 9 Apical loop length = 17 Insertion in stem2 = 0, 0 Free Energy = -22.13 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ....((((((--....{[[{({((((((((.................))))))))})}]]}..--...)))))).... target GGUCGGCCAG--CUAAUGAUGACCUGCACUAAAACCCAAAACUGGGGAGUGCAGGCCUGAUGU--CACUUGGCCACCA **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = JXSJ01000073.1:subseq_462657,118303_ Strand = - Positions = 113054 - 112991 Found by: Infernal (score=12.64) Covels (score=4.88) Stem2 length = 8 Apical loop length = 13 Insertion in stem2 = 1, 0 Free Energy = -8.92 ..(((((((.......((((((((((.(((...................)))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccug-gcccgAAAcCcuuuuuggggugggccaggcCuGAUGuuuuuucaugaccggc (({((((((---....{[[{(({(((.(((.............------))))))}))}]]}----.--.))))))})) target UGCAGCAAC---UGUAUGAUGUCUGUAUUGGAGGAAGACAGUA------CAAGCAAACUGAU----C--UGUUGUUUCA **** ****