------- SECIS element -- id:1 -- grade:A ----
 Chromosome = JXSJ01000182.1:subseq_1,58805_ Strand = + Positions = 10683 - 10766
 Found by:  Infernal (score=18.21) Covels (score=26.87)
 Stem2 length = 9   Apical loop length = 16   Insertion in stem2 = 0, 0
 Free Energy = -4.54

         ..(((((((.............(((((((((((((((................))))))))))))))).........)))))))..
 model   uucggucaugcg------UuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc
         ..(([({((.............{[[{{((((({((((................))))})))))}}]]}.....-.-.))})]))..
 target  GGAUGGCCAACUGACCAUCCAGUGACAUCUUCACCUGAAGCCUGGCAGACAGGCGGGCGAGGACCGAUGCUCU-G-CUGCCAAUGC
                               ****           ^^                         ****                  

------- SECIS element -- id:2 -- grade:A ----
 Chromosome = JXSJ01000182.1:subseq_1,58805_ Strand = + Positions = 36353 - 36433
 Found by:  Infernal (score=11.04) Covels (score=15.52)
 Stem2 length = 8   Apical loop length = 18   Insertion in stem2 = 1, 0
 Free Energy = -4.26

         ..(((((((.......((((((((((.(((((................)))))))))))))))..........)))))))..
 model   uucggucaugcgUuaAUGAcGgccug-gcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc
         ...((((((.......([[((((({(.{(((..................)))})})))))]])......-...))))))...
 target  GCACAUCGCAAAACAAUGAUGUCAAACUCUGGAAACUUGCAACAAGAAGCAGUUAUGGUGGAGAGGAAG-AGAGCGAUGCUU
                         ****            ^^^                        ****