------- SECIS element -- id:1 -- grade:A ----
 Chromosome = JXSJ01000199.1:subseq_170221,101612_ Strand = + Positions = 51880 - 51956
 Found by:  Infernal (score=29.08) Covels (score=31.41)
 Stem2 length = 9   Apical loop length = 14   Insertion in stem2 = 0, 0
 Free Energy = -12.5

         ..(((((((.......(((((((((((((((...............))))))))))))))).........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc
         ....((({(.......{[[[((({{((((((.....-.........))))))}})))]]]}.....-...)})))....
 target  UGGACGUUGGCGUUCAUGAAGGUUUGGUCUUAAAGC-AGACUCUGCAAGGCCCUGCCGGAUGUCCC-CUGCCACGAAUG
                         ****           ^^^                       ****                  

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = JXSJ01000199.1:subseq_170221,101612_ Strand = - Positions = 41029 - 40940
 Found by:  Infernal (score=11.59) Covels (score=11.81)
 Stem2 length = 11   Apical loop length = 24   Insertion in stem2 = 0, 0
 Free Energy = -21.75

         ..(((((((.......(((((((((((((((..........................)))))))))))))))..........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-----------cuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc
         .(({(((((.......{[[{{(((((((((((........................)))))))))))}}]]}......-...)))))})).
 target  UUGCUGGACACCACCAUGACAGCCAGUGAUGGAAUGACGACAUGUGGCUAAACAUGUCAUCACUGGUCAGAUUAGGCA-GGAGUCCAACAU
                         ****            ^^                                  ****