------- SECIS element -- id:1 -- grade:A ----
 Chromosome = JXSJ01000003.1:subseq_9649972,98963_ Strand = - Positions = 47868 - 47791
 Found by:  Infernal (score=16.15) Covels (score=28.42)
 Stem2 length = 9   Apical loop length = 16   Insertion in stem2 = 0, 0
 Free Energy = -10.38

         ..(((((((.......(((((((((((((((...............)))))))))))))))..........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc
         ..({{{(((.......{[[{(((((({(((......-..........)))}))))))}]]}......-...)))}}})..
 target  GCCCACGAAAGCAGUAUGAUGAGGAGAGACCAAUGG-GAUGUUCUCAGUCCCUCCUCUGAUGACCUG-AGCUUCAACGCU
                         ****           ^^                        ****                   

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = JXSJ01000003.1:subseq_9649972,98963_ Strand = + Positions = 441 - 516
 Found by:  Infernal (score=13.56) Covels (score=8.17)
 Stem2 length = 7   Apical loop length = 17   Insertion in stem2 = 0, 0
 Free Energy = -7.65

         ..(((((((............(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcg-----UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ...(((((((...........{[[(({((({(((.......--..........)))})))}))]]}----..-)))))))...
 target  ACAGCACAUUCAGCACAUAAAUGAGGAUUUACACCUGAGCU--UAAAAGAGCAGUGAAAGCCUGAU----UA-GAUGUGCCAG
                              ****                                     ****