------- SECIS element -- id:1 -- grade:B ---- Chromosome = JXSJ01000129.1:subseq_187740,103192_ Strand = + Positions = 81165 - 81234 Found by: Infernal (score=11.22) Covels (score=9.71) Stem2 length = 8 Apical loop length = 15 Insertion in stem2 = 0, 0 Free Energy = -9.86 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ....(((((---((..{[[{(((({[{(((......--.........)))}]}))))}]]}..--.)-)))))).... target UGAAGUCAU---UUGAUGAUGUUCUAUUUUUAACGA--GUAAAGUUUAAACGUGAACUGACUA--AA-AAUGACGCAU **** ^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = JXSJ01000129.1:subseq_187740,103192_ Strand = - Positions = 89328 - 89250 Found by: Infernal (score=10.22) Covels (score=7.74) Stem2 length = 8 Apical loop length = 14 Insertion in stem2 = 0, 0 Free Energy = -16.24 ..(((((((...........((((((((((.(((((..................))))).))))))))))..........))))))).. model uucggucaugcg----UuaAUGAcGgccug-gcccuAAAcC---cuuuuuggggcgggc-caggcCuGAUGuu-u-uuucaugaccggc ..(((({((((((((.....{[[{((({(({-(((------..............)))-}))})))}]]}..))))-)-)))})))).. target UACUGACGUGUUGUACUGCAUGAAGUAAUAC-UGC------AGUACAUGUUUGUAGUA-UUACUACAGAUACUGCA-A-UACUUCAGCU **** ****