------- SECIS element -- id:1 -- grade:A ----
 Chromosome = JXSJ01000006.1:subseq_3927178,101606_ Strand = - Positions = 49711 - 49634
 Found by:  Infernal (score=37.06) Covels (score=36.23)
 Stem2 length = 11   Apical loop length = 15   Insertion in stem2 = 0, 0
 Free Energy = -14.98

         ..(((((((.......(((((((((((((((...............)))))))))))))))............)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu---u-uuucaugaccggc
         ..(({(({(---(...{[[{((((((((([(...............)])))))))))}]]}........-..))}))}))..
 target  GUGUCUGGA---CUAGUGACGGCCUGUCUGUAAACCCAGCAUUGGGGAGGGCAGGCCUGAUGAUCCAUA-GCGUGCAAACUA
                         ****           ^^^                       ****                     

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = JXSJ01000006.1:subseq_3927178,101606_ Strand = - Positions = 18103 - 18016
 Found by:  Infernal (score=15.78)
 Stem2 length = 9   Apical loop length = 23   Insertion in stem2 = 0, 0
 Free Energy = -8.33

         ..(((((((...........(((((((((((((((.......................)))))))))))))))........)))))))..
 model   uucggucaugcg----UuaAUGAcGgccuggcccuAAAcCcuuuuugggg--------cgggccaggcCuGAUGuuuuuucaugaccggc
         .({((((((...........{[[((((({({((((.......................))))})})))))]]}..--....))))))}).
 target  AGUACAUAUUCUGAUGUCAGUGAUGUACUGAUGGGAAACAAACCUAUAGGUGUCCAUGCCCGCCUGUAUGGAUGC--AUAUAUAUGUUUG
                             ****           ^^^                               ****