------- SECIS element -- id:1 -- grade:A ----
 Chromosome = JXSJ01000014.1:subseq_1,58329_ Strand = - Positions = 6913 - 6836
 Found by:  Infernal (score=31.5) Covels (score=28.97)
 Stem2 length = 9   Apical loop length = 20   Insertion in stem2 = 0, 0
 Free Energy = -14.29

         ..(((((((........(((((((((((((((................)))))))))))))))........)))))))..
 model   uucggucaugcg-UuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ...({[(((........{[[{(((((((((....................)))))))))}]]}..--....)))]})...
 target  GGUCCAGCCCAGAUUAGUGACGGUCUGUUCAUAAACCCGCACGGCGGACAGAGCAGACCUGAUGA--AAAUGGCGUGCAA
                          ****           ^^^                        ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = JXSJ01000014.1:subseq_1,58329_ Strand = - Positions = 11018 - 10938
 Found by:  Infernal (score=10.27)
 Stem2 length = 11   Apical loop length = 21   Insertion in stem2 = 0, 1
 Free Energy = -13.3

         ..(((((((.......((((((((((((((.........................)))))))).))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccgAAAcCcuuuuuggggu--------gggccagg-cCuGAUGuuuuuucaugaccggc
         .((({(({(---....{[[[((({((((((((.....................))))))))}).))]]]}..--..-.)}))}))).
 target  CGUGACUCU---UGCGUGAAGCGUCUCCGUCUACCGUUUCACAACAAGCUGCGGGGCGGAGUCAGCGGAUAU--AA-UGUAGCCAUU
                         ****             ^^                               ****