Command line: [exonerate -m p2g --showtargetgff -q gpx7_zf.aa.fa.canviat -t genomegpx7_JXSJ01000525.1.fa]
Hostname: [ws116074U]

C4 Alignment:
------------
         Query: SPP00000619_2.0 # Protein # Glutathione peroxidase 7 (GPx7) # Zebrafish 
        Target: JXSJ01000525.1:subseq(129948,74852) Miichthys miiuy scaffold525, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 596
   Query range: 1 -> 147
  Target range: 49999 -> 51105

     2 : ValSerLeuAlaValAsnValAlaSerGluCysGlyTyrThrAspGluHisTyrLysAsp :    21
         |||||||||!.!||||||||||||||||||||||||!:!|||!!:||||||||||||:::
         ValSerLeuValValAsnValAlaSerGluCysGlyPheThrGluGluHisTyrLysGlu
 50000 : GTTTCGCTGGTGGTGAATGTAGCCAGTGAATGTGGCTTCACTGAGGAACACtacaaagaa : 50057

    22 : LeuGlnGlnLeuGlnLysAspPheGlyProPheHisPheAsnValLeuAlaPheProCys :    41
         :::||||||||||||::!||||||||||||!:!|||||||||||||||||||||||||||
         MetGlnGlnLeuGlnArgAspPheGlyProTyrHisPheAsnValLeuAlaPheProCys
 50058 : atgcagcagcTCCAGCGAGACTTTGGGCCGTACCACTTCAATGTGCTGGCCTTCCCCTGC : 50117

    42 : AsnGlnPheGlyGlnGlnGluProGlySerAspLysGluIleAspSerPheValArgArg :    61
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         AsnGlnPheGlyGlnGlnGluProGlySerAspLysGluIleAspSerPheValArgArg
 50118 : AACCAGTTTGGGCAGCAAGAGCCTGGCAGTGACAAGGAGATCGACAGCTTTGTTCGCAGA : 50177

    62 : ValTyrGlyValSerPheProIlePheSerLysIleAlaValValGlyIleGlyAlaAsn :    81
         |||||||||||||||||||||:!:||||||||||||||||||||||||! !|||||||||
         ValTyrGlyValSerPheProLeuPheSerLysIleAlaValValGlyThrGlyAlaAsn
 50178 : GTCTACGGAGTCTCCTTCCCTCTGTTCAGTAAAATCGCTGTAGTCGGAACTGGAGCCAAC : 50237

    82 : AsnAlaTyrLysTyrLeuGly{L}  >>>> Target Intron 1 >>>>  {eu}Leu :    90
         |||!.!||||||||||||! !{:}            668 bp           {!!}  !
         AsnValTyrLysTyrLeuVal{V}++                         -+{al}Lys
 50238 : AATGTGTACAAGTACCTTGTT{G}gt.........................tg{TG}AAG : 50932

    91 : SerSerLysHisSerSerValPheLeuLeuIleSerGluAlaSerArgLysGluProThr :   110
         :!!!!!!!.  !! !! !:!!  !|||!!!:!!!!!|||:!!||| !!|||||||||  !
         AlaCysAsnPhePhePheIleProLeuPheLeuThrGluSerSerGlyLysGluProAsp
 50933 : GCCTGTAACTTCTTTTTTATTCCCTTATTTCTCACAGAGTCTTCTGGAAAAGAGCCTGAC : 50992

   111 : TrpAsnPheTrpLysTyrLeuIleAspThrAspGlyLysValValAspAlaTrpGlyPro :   130
         |||||||||||||||||||||||||||..!:!!|||||||||||||||||||||||||||
         TrpAsnPheTrpLysTyrLeuIleAspValAsnGlyLysValValAspAlaTrpGlyPro
 50993 : TGGAATTTCTGGAAATATCTAATTGATGTAAACGGCAAAGTGGTAGACGCATGGGGACCA : 51052

   131 : GluValSerValLysGluIleArgProArgIleThrGluMetValArgLys :   147
         :!!||||||||||||||||||||||||!:!|||.!!||||||||||||:!!
         LysValSerValLysGluIleArgProLysIleAlaGluMetValArgGln
 51053 : AAAGTTTCTGTCAAAGAAATCCGACCCAAAATAGCTGAAATGGTGCGGCAG : 51105

vulgar: SPP00000619_2.0 1 147 . JXSJ01000525.1:subseq(129948,74852) 49999 51105 + 596 M 87 261 S 0 1 5 0 2 I 0 664 3 0 2 S 1 2 M 58 174
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2016-11-17
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
JXSJ01000525.1:subseq(129948,74852)	exonerate:protein2genome:local	gene	50000	51105	596	+	.	gene_id 1 ; sequence SPP00000619_2.0 ; gene_orientation +
JXSJ01000525.1:subseq(129948,74852)	exonerate:protein2genome:local	cds	50000	50261	.	+	.	
JXSJ01000525.1:subseq(129948,74852)	exonerate:protein2genome:local	exon	50000	50261	.	+	.	insertions 0 ; deletions 0
JXSJ01000525.1:subseq(129948,74852)	exonerate:protein2genome:local	splice5	50262	50263	.	+	.	intron_id 1 ; splice_site "GT"
JXSJ01000525.1:subseq(129948,74852)	exonerate:protein2genome:local	intron	50262	50929	.	+	.	intron_id 1
JXSJ01000525.1:subseq(129948,74852)	exonerate:protein2genome:local	splice3	50928	50929	.	+	.	intron_id 0 ; splice_site "TG"
JXSJ01000525.1:subseq(129948,74852)	exonerate:protein2genome:local	cds	50930	51105	.	+	.	
JXSJ01000525.1:subseq(129948,74852)	exonerate:protein2genome:local	exon	50930	51105	.	+	.	insertions 0 ; deletions 0
JXSJ01000525.1:subseq(129948,74852)	exonerate:protein2genome:local	similarity	50000	51105	596	+	.	alignment_id 1 ; Query SPP00000619_2.0 ; Align 50000 2 261 ; Align 50932 90 174
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis