TBLASTN 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: /export/cursos/20428/BI/genomes/2016/Miichthys_miiuy/genome.fa 6,294 sequences; 619,300,777 total letters Query= SPP00000619_2.0 # Protein # Glutathione peroxidase 7 (GPx7) # Zebrafish Length=147 Score E Sequences producing significant alignments: (Bits) Value JXSJ01000525.1 Miichthys miiuy scaffold525, whole genome shotgu... 168 2e-46 JXSJ01000013.1 Miichthys miiuy scaffold13, whole genome shotgun... 102 9e-24 JXSJ01002762.1 Miichthys miiuy scaffold2762, whole genome shotg... 95.1 3e-21 JXSJ01000061.1 Miichthys miiuy scaffold61, whole genome shotgun... 42.7 5e-04 JXSJ01000010.1 Miichthys miiuy scaffold10, whole genome shotgun... 41.6 0.001 JXSJ01000006.1 Miichthys miiuy scaffold6, whole genome shotgun ... 40.4 0.003 JXSJ01000009.1 Miichthys miiuy scaffold9, whole genome shotgun ... 39.3 0.007 JXSJ01000043.1 Miichthys miiuy scaffold43, whole genome shotgun... 37.0 0.053 JXSJ01000122.1 Miichthys miiuy scaffold122, whole genome shotgu... 36.6 0.064 JXSJ01000014.1 Miichthys miiuy scaffold14, whole genome shotgun... 35.0 0.20 JXSJ01001549.1 Miichthys miiuy scaffold1549, whole genome shotg... 33.9 0.58 JXSJ01001410.1 Miichthys miiuy scaffold1410, whole genome shotg... 30.8 6.9 JXSJ01000001.1 Miichthys miiuy scaffold1, whole genome shotgun ... 30.4 8.5 > JXSJ01000525.1 Miichthys miiuy scaffold525, whole genome shotgun sequence Length=204830 Score = 168 bits (425), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 76/86 (88%), Positives = 83/86 (97%), Gaps = 0/86 (0%) Frame = +2 Query 2 VSLAVNVASECGYTDEHYKDLQQLQKDFGPFHFNVLAFPCNQFGQQEPGSDKEIDSFVRR 61 VSL VNVASECG+T+EHYK++QQLQ+DFGP+HFNVLAFPCNQFGQQEPGSDKEIDSFVRR Sbjct 179948 VSLVVNVASECGFTEEHYKEMQQLQRDFGPYHFNVLAFPCNQFGQQEPGSDKEIDSFVRR 180127 Query 62 VYGVSFPIFSKIAVVGIGANNAYKYL 87 VYGVSFP+FSKIAVVG GANN YKYL Sbjct 180128 VYGVSFPLFSKIAVVGTGANNVYKYL 180205 Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 37/49 (76%), Positives = 44/49 (90%), Gaps = 0/49 (0%) Frame = +1 Query 99 LLISEASRKEPTWNFWKYLIDTDGKVVDAWGPEVSVKEIRPRITEMVRK 147 L ++E+S KEP WNFWKYLID +GKVVDAWGP+VSVKEIRP+I EMVR+ Sbjct 180907 LFLTESSGKEPDWNFWKYLIDVNGKVVDAWGPKVSVKEIRPKIAEMVRQ 181053 > JXSJ01000013.1 Miichthys miiuy scaffold13, whole genome shotgun sequence Length=5370402 Score = 102 bits (255), Expect = 9e-24, Method: Composition-based stats. Identities = 42/87 (48%), Positives = 63/87 (72%), Gaps = 0/87 (0%) Frame = -1 Query 1 QVSLAVNVASECGYTDEHYKDLQQLQKDFGPFHFNVLAFPCNQFGQQEPGSDKEIDSFVR 60 Q SL VNVAS C T+ +Y+ +Q+L ++ G HFNVLAFPC QFG E G+ ++I++F + Sbjct 1302516 QASLVVNVASHCEQTEANYRSMQELHRELGTSHFNVLAFPCGQFGDTETGTSRDIEAFAK 1302337 Query 61 RVYGVSFPIFSKIAVVGIGANNAYKYL 87 YGV+FP FS+I ++G A+ A+++L Sbjct 1302336 STYGVTFPFFSRIKIMGSEADPAFRFL 1302256 Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 34/51 (67%), Gaps = 0/51 (0%) Frame = -3 Query 97 VFLLISEASRKEPTWNFWKYLIDTDGKVVDAWGPEVSVKEIRPRITEMVRK 147 V +S++ +K P WNFWK+L++ +GKVV W + ++ +R +T MVR+ Sbjct 1301371 VVCCLSDSVKKIPKWNFWKFLVNPEGKVVRFWRTDEPMESVRQEVTAMVRE 1301219 > JXSJ01002762.1 Miichthys miiuy scaffold2762, whole genome shotgun sequence Length=6586 Score = 95.1 bits (235), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 56/153 (37%), Positives = 82/153 (54%), Gaps = 11/153 (7%) Frame = -1 Query 1 QVSLAVNVASECGYTDEHYKDLQQLQKDFGPFHFNVLAFPCNQFGQQEPGSDKEIDSFVR 60 +V L VNVAS+CG T + Y L++L ++ VL FP N F +QEPGSD+EI +F Sbjct 4435 KVLLVVNVASKCGLTPQ-YAGLEKLYEEHREAGLEVLGFPANDFREQEPGSDEEIKAFCS 4259 Query 61 RVYGVSFPIFSKIAVVGIGANNAYKYLGLLSSKHSSVFLL--------ISEASRKEPTWN 112 Y V FP+FSKIAV G + Y+ L + + + I E WN Sbjct 4258 LNYAVQFPLFSKIAVTGADRHPLYRLLTEAQPQTTGEGPMRERLKGYGIEPGPLPEVLWN 4079 Query 113 FWKYLIDTDGKVVDAWGPEVSVKEIRPRITEMV 145 F K+L+ DG+VV + P+V+ + PR+ + + Sbjct 4078 FEKFLVSRDGQVVARFAPDVAADD--PRLLQAI 3986 > JXSJ01000061.1 Miichthys miiuy scaffold61, whole genome shotgun sequence Length=1726861 Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats. Identities = 23/47 (49%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +3 Query 1 QVSLAVNVASECGYTDEHYKDLQQLQKDFGPFHFNVLAFPCNQFGQQ 47 +V L NVAS G T + +L QLQ + P VL FPCNQFG Q Sbjct 671040 RVVLIENVASL*GTTTRDFSELNQLQSKY-PHRLVVLGFPCNQFGYQ 671177 > JXSJ01000010.1 Miichthys miiuy scaffold10, whole genome shotgun sequence Length=6703581 Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats. Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 0/25 (0%) Frame = +3 Query 31 PFHFNVLAFPCNQFGQQEPGSDKEI 55 P +L FPCNQFG+QEPG EI Sbjct 2819751 PLGLTILGFPCNQFGKQEPGQKHEI 2819825 Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 0/37 (0%) Frame = +3 Query 111 WNFWKYLIDTDGKVVDAWGPEVSVKEIRPRITEMVRK 147 WNF K+L+ DGK V W P V++ E+R I + + K Sbjct 2820978 WNFEKFLVGPDGKPVMRWHPSVNISEVRSDIRKYLLK 2821088 > JXSJ01000006.1 Miichthys miiuy scaffold6, whole genome shotgun sequence Length=7996890 Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 0/46 (0%) Frame = -3 Query 2 VSLAVNVASECGYTDEHYKDLQQLQKDFGPFHFNVLAFPCNQFGQQ 47 V + VNVAS+ G T +Y L + + +L FPCNQFG Q Sbjct 3978775 VCIIVNVASK*GKTRVNYTQLAGMHASYAEKGLRILGFPCNQFGGQ 3978638 Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust. Identities = 18/41 (44%), Positives = 25/41 (61%), Gaps = 1/41 (2%) Frame = -1 Query 47 QEPGSDKEIDSFVRRVYGVSFPIFSKIAVVGIGANNAYKYL 87 QEPG+D EI F + Y F +FSKI V G A+ +K++ Sbjct 3978360 QEPGTDAEIKEFAKG-YNAEFDLFSKIDVNGDNAHPLWKWM 3978241 > JXSJ01000009.1 Miichthys miiuy scaffold9, whole genome shotgun sequence Length=6752331 Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust. Identities = 18/37 (49%), Positives = 19/37 (51%), Gaps = 0/37 (0%) Frame = -1 Query 18 HYKDLQQLQKDFGPFHFNVLAFPCNQFGQQEPGSDKE 54 Y L L + FG F VL F CNQFG Q PG E Sbjct 4883949 QYHRLNALMEMFGDIRFTVLGFSCNQFGLQSPGRYTE 4883839 > JXSJ01000043.1 Miichthys miiuy scaffold43, whole genome shotgun sequence Length=2573463 Score = 37.0 bits (84), Expect = 0.053, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (49%), Gaps = 0/47 (0%) Frame = -3 Query 1 QVSLAVNVASECGYTDEHYKDLQQLQKDFGPFHFNVLAFPCNQFGQQ 47 +V L NVAS G T Y + +L + +L PCNQFG Q Sbjct 1231810 KVVLIENVASL*GTTTRDYTQMNELHSRYAAKGLVILGVPCNQFGHQ 1231670 Score = 31.2 bits (69), Expect = 4.6, Method: Compositional matrix adjust. Identities = 25/115 (22%), Positives = 50/115 (43%), Gaps = 14/115 (12%) Frame = -2 Query 47 QEPGSDKEIDSFVRRV-----YGVSFPIFSKIAVVGIGANNAYKYL---------GLLSS 92 QE ++EI + ++ V + F I K+ V G A+ + +L ++ Sbjct 1231226 QENSKNEEILNSLKYVRPGNGFEPKFKILEKVNVNGKDAHPLFVFLKDKLRFPSDDAMAL 1231047 Query 93 KHSSVFLLISEASRKEPTWNFWKYLIDTDGKVVDAWGPEVSVKEIRPRITEMVRK 147 + ++ S R + +WNF K+L+ DG+ + +I P I E++ + Sbjct 1231046 MNDPQCIIWSPVCRNDISWNFEKFLVGPDGEPYKRYSRNFLTIDIEPDIKELLER 1230882 > JXSJ01000122.1 Miichthys miiuy scaffold122, whole genome shotgun sequence Length=783778 Score = 36.6 bits (83), Expect = 0.064, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 23/47 (49%), Gaps = 0/47 (0%) Frame = -2 Query 1 QVSLAVNVASECGYTDEHYKDLQQLQKDFGPFHFNVLAFPCNQFGQQ 47 +V L NVAS G T Y + +L + +L PCNQFG Q Sbjct 470508 KVVLIENVASL*GTTTRDYTQMNELHDRYASKGLVILGVPCNQFGHQ 470368 > JXSJ01000014.1 Miichthys miiuy scaffold14, whole genome shotgun sequence Length=5141783 Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 0/46 (0%) Frame = -1 Query 2 VSLAVNVASECGYTDEHYKDLQQLQKDFGPFHFNVLAFPCNQFGQQ 47 V + NVAS+ G T +Y L + +LAFP NQFG Q Sbjct 8315 VVIITNVASK*GKTLVNYSQFADLHARYAERGLRILAFPSNQFGNQ 8178 > JXSJ01001549.1 Miichthys miiuy scaffold1549, whole genome shotgun sequence Length=44827 Score = 33.9 bits (76), Expect = 0.58, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 21/47 (45%), Gaps = 1/47 (2%) Frame = +2 Query 7 NVASECGYTDEHYKDLQQLQKDFGPFHFNVLAFPCNQFGQQEPGSDK 53 N+ +CGYT H Q Q FGPF F L P F + P K Sbjct 17327 NMTDQCGYTIGHTSVTSQQQHRFGPF-FMQLQIPTGAFQKCSPAISK 17464 > JXSJ01001410.1 Miichthys miiuy scaffold1410, whole genome shotgun sequence Length=54684 Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (8%) Frame = +2 Query 22 LQQLQKDF-GP---FHFNVLAFPCNQFGQQEPGSDKEIDSFVRRVYGVSFP 68 LQ +QK GP H+NVL + CN +G+ P S + +Y +P Sbjct 33767 LQNVQKGLKGPHCRLHYNVLWWKCN*YGKVRPHSSLLLLHICSYIYDTPYP 33919 > JXSJ01000001.1 Miichthys miiuy scaffold1, whole genome shotgun sequence Length=20211669 Score = 30.4 bits (67), Expect = 8.5, Method: Compositional matrix adjust. Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 0/37 (0%) Frame = -3 Query 9 ASECGYTDEHYKDLQQLQKDFGPFHFNVLAFPCNQFG 45 +E GY H+ L+ +++ F HF+V A C+ G Sbjct 16659886 GAEMGYNINHFNSLKSIEQIFKKLHFSVTALLCSHQG 16659776 Lambda K H a alpha 0.320 0.137 0.417 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 7818406748 Database: /export/cursos/20428/BI/genomes/2016/Miichthys_miiuy/genome.fa Posted date: Oct 21, 2016 4:44 PM Number of letters in database: 619,300,777 Number of sequences in database: 6,294 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40