TBLASTN 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: /export/cursos/20428/BI/genomes/2016/Miichthys_miiuy/genome.fa 6,294 sequences; 619,300,777 total letters Query= SPP00002930_2.0 # Protein # glucose-6-phosphate dehydrogenase (G6PD) # Human Length=545 Score E Sequences producing significant alignments: (Bits) Value JXSJ01000019.1 Miichthys miiuy scaffold19, whole genome shotgun... 148 1e-58 JXSJ01000005.1 Miichthys miiuy scaffold5, whole genome shotgun ... 141 6e-56 JXSJ01000043.1 Miichthys miiuy scaffold43, whole genome shotgun... 84.3 2e-15 > JXSJ01000019.1 Miichthys miiuy scaffold19, whole genome shotgun sequence Length=4702314 Score = 148 bits (373), Expect(2) = 1e-58, Method: Compositional matrix adjust. Identities = 68/85 (80%), Positives = 75/85 (88%), Gaps = 0/85 (0%) Frame = +3 Query 375 ENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKM 434 EN R GVPFILRCGKALNERKAEVRLQF DV GDIF QC RNELV+RVQPNEAVY KM Sbjct 3634308 ENSRSSGVPFILRCGKALNERKAEVRLQFTDVPGDIFGNQCHRNELVVRVQPNEAVYAKM 3634487 Query 435 MTKKPGMFFNPEESELDLTYGNRYK 459 M+KKPG++F+PEE+ELDLTY +RYK Sbjct 3634488 MSKKPGVYFSPEETELDLTYKSRYK 3634562 Score = 102 bits (254), Expect(2) = 1e-58, Method: Compositional matrix adjust. Identities = 46/63 (73%), Positives = 53/63 (84%), Gaps = 0/63 (0%) Frame = +1 Query 319 VKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENER 378 VKVLKCI+ V ++VVLGQYVG+P+GEG+A GYLDDPTVP+GST ATF VLYV NER Sbjct 3634051 VKVLKCIAPVSMSDVVLGQYVGDPNGEGDAKLGYLDDPTVPKGSTQATFTTAVLYVHNER 3634230 Query 379 WDG 381 WDG Sbjct 3634231 WDG 3634239 Score = 90.5 bits (223), Expect(3) = 2e-29, Method: Compositional matrix adjust. Identities = 42/79 (53%), Positives = 55/79 (70%), Gaps = 0/79 (0%) Frame = +1 Query 112 KQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLA 171 K S P + T E +L FF RN+Y++G+Y D +S+ +LN+H+ +L G +ANRLFYLA Sbjct 3630193 KCSRPLTQVTDTETERLSAFFKRNTYISGKYADDSSFSKLNTHILSLPGGPEANRLFYLA 3630372 Query 172 LPPTVYEAVTKNIHESCMS 190 LPPTVY VTKNI CMS Sbjct 3630373 LPPTVYHDVTKNIKHCCMS 3630429 Score = 52.0 bits (123), Expect(3) = 2e-29, Method: Compositional matrix adjust. Identities = 23/37 (62%), Positives = 26/37 (70%), Gaps = 0/37 (0%) Frame = +3 Query 84 WLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKA 120 WLFRDGLLPE T+ VG+ARS LTV IR P+ K Sbjct 3629979 WLFRDGLLPEQTYFVGFARSDLTVDAIRAACMPYLKV 3630089 Score = 30.4 bits (67), Expect(3) = 2e-29, Method: Compositional matrix adjust. Identities = 12/13 (92%), Positives = 13/13 (100%), Gaps = 0/13 (0%) Frame = +2 Query 71 GDLAKKKIYPTIW 83 GDLAKKKIYPT+W Sbjct 3629831 GDLAKKKIYPTLW 3629869 Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 46/58 (79%), Positives = 51/58 (88%), Gaps = 0/58 (0%) Frame = +3 Query 188 CMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLR 245 C+ GWNR+IVEKPFG DLQSS+ LS H+SSLF E+QIYRIDHYLGKEMVQNLMVLR Sbjct 3630735 CVLCRGWNRVIVEKPFGHDLQSSEELSTHLSSLFTEEQIYRIDHYLGKEMVQNLMVLR 3630908 Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 36/43 (84%), Positives = 42/43 (98%), Gaps = 0/43 (0%) Frame = +2 Query 245 RFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIR 287 RF NRIFGPIWNR+++ACV+LTFKEPFGT+GRGGYFD+FGIIR Sbjct 3631745 RFGNRIFGPIWNRESVACVVLTFKEPFGTQGRGGYFDDFGIIR 3631873 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/38 (89%), Positives = 37/38 (97%), Gaps = 0/38 (0%) Frame = +1 Query 283 FGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVK 320 F +IRDVMQNHLLQMLCLVAMEKPAST+SDDVRDEKV+ Sbjct 3632992 FVLIRDVMQNHLLQMLCLVAMEKPASTSSDDVRDEKVE 3633105 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 28/31 (90%), Positives = 29/31 (94%), Gaps = 0/31 (0%) Frame = +2 Query 485 SDELREAWRIFTPLLHQIELEKPKPIPYIYG 515 SDELREAWRIFTPLLHQI+ EKPKPIPY YG Sbjct 3635006 SDELREAWRIFTPLLHQIDREKPKPIPYKYG 3635098 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 24/27 (89%), Positives = 27/27 (100%), Gaps = 0/27 (0%) Frame = +1 Query 458 YKNVKLPDAYERLILDVFCGSQMHFVR 484 +++VKLPDAYERLILDVFCGSQMHFVR Sbjct 3634702 FQDVKLPDAYERLILDVFCGSQMHFVR 3634782 Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 24/30 (80%), Positives = 27/30 (90%), Gaps = 0/30 (0%) Frame = +1 Query 516 SRGPTEADELMKRVGFQYEGTYKWVNPHKL 545 SRGP EAD+L KRVGF+YEGTYKWV+P KL Sbjct 3636151 SRGPAEADDLAKRVGFRYEGTYKWVSPQKL 3636240 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/36 (61%), Positives = 28/36 (78%), Gaps = 0/36 (0%) Frame = +1 Query 35 VALSRTQVCGILREELFQGDAFHQSDTHIFIIMGAS 70 + LSR++V G LR+EL + FHQSD H+FIIMGAS Sbjct 3627001 IPLSRSEVFGELRKELHEDKEFHQSDAHVFIIMGAS 3627108 > JXSJ01000005.1 Miichthys miiuy scaffold5, whole genome shotgun sequence Length=8875486 Score = 141 bits (356), Expect(2) = 6e-56, Method: Compositional matrix adjust. Identities = 66/98 (67%), Positives = 81/98 (83%), Gaps = 5/98 (5%) Frame = -1 Query 381 GVPFILRCGKALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPG 440 GVPFILRCGKALNERKAEVRLQF DV GDIF ++C+RNELV+RVQP+EA+Y KMMTK+PG Sbjct 2741656 GVPFILRCGKALNERKAEVRLQFTDVPGDIFAERCQRNELVVRVQPDEAIYLKMMTKRPG 2741477 Query 441 MFFNPEESELDLTYGNRYKNVKLPDAYERLILDVFCGS 478 ++F+PEE+ELDLTY +RYK ++ L + CGS Sbjct 2741476 VYFSPEETELDLTYKSRYKVLQ-----PHLTQSIHCGS 2741378 Score = 99.8 bits (247), Expect(2) = 6e-56, Method: Compositional matrix adjust. Identities = 45/63 (71%), Positives = 53/63 (84%), Gaps = 0/63 (0%) Frame = -3 Query 319 VKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENER 378 VKVLKCI+ V ++VVLGQYVG+P+GEG++ GYLDDPTVP GS T TFA VLYV+NER Sbjct 2741936 VKVLKCIAPVAVSDVVLGQYVGDPEGEGQSKLGYLDDPTVPEGSCTPTFATAVLYVQNER 2741757 Query 379 WDG 381 WDG Sbjct 2741756 WDG 2741748 Score = 167 bits (423), Expect(3) = 2e-52, Method: Compositional matrix adjust. Identities = 86/157 (55%), Positives = 101/157 (64%), Gaps = 28/157 (18%) Frame = -2 Query 117 FFKATPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPTV 176 F + T +E L FF+RNSY G+YDD +S+ +LN+H+ +L G+ ANRLFYLALPPT+ Sbjct 2743020 FTQVTDDESESLSAFFSRNSYFRGRYDDDSSFSQLNAHLLSLPGGADANRLFYLALPPTI 2742841 Query 177 YEAVTKNIHESCMSQI----------------------------GWNRIIVEKPFGRDLQ 208 Y V+ NI CMS GWNR+IVEKPFGRDLQ Sbjct 2742840 YHHVSTNIRNHCMSSKSTSV*LYKNNDLLTI*LLYSNQLCL*NRGWNRVIVEKPFGRDLQ 2742661 Query 209 SSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLR 245 SS LS H+SSLF EDQIYRIDHYLGKEMVQNLMVLR Sbjct 2742660 SSQELSAHLSSLFTEDQIYRIDHYLGKEMVQNLMVLR 2742550 Score = 49.7 bits (117), Expect(3) = 2e-52, Method: Compositional matrix adjust. Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 0/41 (0%) Frame = -1 Query 80 PTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKA 120 P WLFRDGLLP++T+ VG+ARS LT+ +I+ P K Sbjct 2743219 PLFRWLFRDGLLPDDTYFVGFARSNLTIENIKAACLPHMKV 2743097 Score = 33.5 bits (75), Expect(3) = 2e-52, Method: Compositional matrix adjust. Identities = 13/20 (65%), Positives = 16/20 (80%), Gaps = 0/20 (0%) Frame = -2 Query 64 FIIMGASGDLAKKKIYPTIW 83 ++ A GDLAKKKIYPT+W Sbjct 2743395 LFVLFAQGDLAKKKIYPTLW 2743336 Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/134 (52%), Positives = 80/134 (60%), Gaps = 35/134 (26%) Frame = -2 Query 241 LMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGII-------------- 286 + RF NRIFGPIWNR+++ACV+LTFKEPFGT+GRGGYFD+FGII Sbjct 2742375 FLTSRFGNRIFGPIWNRNSVACVVLTFKEPFGTQGRGGYFDDFGIIR*DTVNSDKSENTD 2742196 Query 287 ---------------------RDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCI 325 RDVMQNHLLQMLCLVAMEKPASTN DDVRDEKV + Sbjct 2742195 YIFILTLKPLLGLIPFLAS*YRDVMQNHLLQMLCLVAMEKPASTNPDDVRDEKVISMIGW 2742016 Query 326 SEVQANNVVLGQYV 339 E+ + YV Sbjct 2742015 LEIVGRLCIFSVYV 2741974 Score = 62.4 bits (150), Expect(2) = 2e-18, Method: Compositional matrix adjust. Identities = 31/51 (61%), Positives = 36/51 (71%), Gaps = 7/51 (14%) Frame = -1 Query 472 LDVFCGSQM-------HFVRSDELREAWRIFTPLLHQIELEKPKPIPYIYG 515 ++VFC + + F SDELREAWRIFTPLLHQIE EK +PIPY YG Sbjct 2740882 VEVFCYNVVFYDLNSSSFCPSDELREAWRIFTPLLHQIEAEKTQPIPYTYG 2740730 Score = 52.8 bits (125), Expect(2) = 2e-18, Method: Compositional matrix adjust. Identities = 22/27 (81%), Positives = 25/27 (93%), Gaps = 0/27 (0%) Frame = -2 Query 516 SRGPTEADELMKRVGFQYEGTYKWVNP 542 SRGP EAD+L+KRVGF+YEGTYKWV P Sbjct 2740632 SRGPNEADDLVKRVGFRYEGTYKWVQP 2740552 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/26 (92%), Positives = 26/26 (100%), Gaps = 0/26 (0%) Frame = -3 Query 459 KNVKLPDAYERLILDVFCGSQMHFVR 484 +NVKLPDAYERLILDVFCG+QMHFVR Sbjct 2740994 QNVKLPDAYERLILDVFCGNQMHFVR 2740917 > JXSJ01000043.1 Miichthys miiuy scaffold43, whole genome shotgun sequence Length=2573463 Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 17/186 (9%) Frame = -1 Query 65 IIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEE 124 +I+G +GDLAKK ++ + L+ + + NTF + L+ AD K F+ Sbjct 865101 VIVGGTGDLAKKYLWRGFFELYVNKVKSGNTF--SFYGGGLSPAD--KGKPALFEILKAL 864934 Query 125 KLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLG------------SQANRLFYLAL 172 + R + + Q+ Y+ L + N L ++A RLFYL++ Sbjct 864933 SCSKDVSQERCALLKEQFLRLTQYRELKTLENYQKLAKDIEQDLKQEGMTEAGRLFYLSV 864754 Query 173 PPTVYEAVTKNIHESCMSQIG-WNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDH 231 P Y + I+ SC G W R+++EKPFG D +S+ L++ + ++ ++YRIDH Sbjct 864753 PAFAYADIADKINSSCRPTSGAWLRVVLEKPFGHDFRSAQVLASQLGGSLKDKEMYRIDH 864574 Query 232 YLGKEM 237 YLGK++ Sbjct 864573 YLGKQV 864556 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 25/66 (38%), Positives = 49/66 (74%), Gaps = 1/66 (2%) Frame = -1 Query 274 EGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPAS-TNSDDVRDEKVKVLKCISEVQANN 332 +GR ++D++G+IRDV+QNHL +++ L++M+ P + +NS++V + K+++ + + V N Sbjct 864261 QGRIAFYDQYGVIRDVLQNHLTEVMTLLSMKLPKNLSNSEEVLNNKLQIFRSLLPVGKNQ 864082 Query 333 VVLGQY 338 V+GQY Sbjct 864081 AVVGQY 864064 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 81/181 (45%), Gaps = 33/181 (18%) Frame = -3 Query 368 AAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDIFHQQ------CKRNELV 421 +AV+ Y++ +++G+P ++ GK L+ER R+ F + DIF Q CK ++V Sbjct 863875 SAVLAYIDEAQYEGIPILMISGKMLDERVGYTRIVFKN---DIFCVQNHNSVHCKPKQIV 863705 Query 422 IRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVK---LP-------------D 465 Y ++ K F P + + +K+V LP + Sbjct 863704 FYFGHGSLQYPAVLVSKN--LFKPVLMDAEWKEVTEHKDVNVLGLPISDYYVHTPKEQRE 863531 Query 466 AYERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPIPYIYGSRGPTEADEL 525 AY LI +F G + F+ ++ L +W ++TPLL + + P+ P G TE +L Sbjct 863530 AYSELISHIFAGRKNSFISTENLLASWGLWTPLLSSLAISFPRIYP------GGTENGDL 863369 Query 526 M 526 + Sbjct 863368 L 863366 Lambda K H a alpha 0.321 0.138 0.418 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 86163389612 Database: /export/cursos/20428/BI/genomes/2016/Miichthys_miiuy/genome.fa Posted date: Oct 21, 2016 4:44 PM Number of letters in database: 619,300,777 Number of sequences in database: 6,294 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40