genewise output
Score 77.11 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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                  18 KFIKLKTLLEDEFPNELEI                       TGEGTPS 
                     +F KLKTLLEDEFP +LEI                       TGE TP+ 
                     QFTKLKTLLEDEFPGDLEI                       TGESTPT 
JARO01016227.1: 2533 ctaacaatcgggtcggcgaGTAAGTA  Intron 1   TAGaggaaca 
                     atcatacttaaatcgatat<0-----[2590 : 2690]-0>cgagccc 
                     gccacgtgtgtacatttgt                       ttgcggg 


                  44 TTGWLEVEVNGKLVHSKK                       NGDGFVDS 
                     TTGW EVEVNGKLVHSKK                        GDG +DS 
                     TTGWFEVEVNGKLVHSKK                       RGDGHLDS 
JARO01016227.1: 2712 aagttggggagacgctaaGTAAAAG  Intron 2   CAGcgggccga 
                     ccggtatatagattacaa<0-----[2766 : 3139]-0>ggagatag 
                     agggcggggccggctggg                       ggtatacc 


                  70 DSKMQKIVTAIEQAMGK                                 
                     D K+  +V AIE+A+GK                                 
                     DKKLAVVVRAIEEALGK                                 
JARO01016227.1: 3164 gaacggggagagggtga                                 
                     aaatctttgctaactga                                 
                     tggtgtgggctagtgga                                 


//
>JARO01016227.1:subseq(1,5808).pep
QFTKLKTLLEDEFPGDLEITGESTPTTTGWFEVEVNGKLVHSKKRGDGHLDSDKKLAVVV
RAIEEALGK
//
>JARO01016227.1:subseq(1,5808).[2533:3214].sp
CAGTTCACCAAACTCAAGACTTTGCTTGAGGATGAATTCCCAGGTGATCTTGAGATTACT
GGTGAGAGCACGCCGACGACAACGGGGTGGTTCGAGGTGGAGGTGAACGGCAAGCTGGTC
CATTCGAAGAAGCGGGGGGATGGACATCTAGACAGCGATAAGAAGCTTGCGGTTGTGGTG
AGGGCCATTGAAGAGGCTTTGGGGAAA
//
JARO01016227.1:subseq(1,5808)	GeneWise	match	2533	3214	77.11	+	.	JARO01016227.1:subseq(1,5808)-genewise-prediction-1
JARO01016227.1:subseq(1,5808)	GeneWise	cds	2533	2589	0.00	+	0	JARO01016227.1:subseq(1,5808)-genewise-prediction-1
JARO01016227.1:subseq(1,5808)	GeneWise	intron	2590	2690	0.00	+	.	JARO01016227.1:subseq(1,5808)-genewise-prediction-1
JARO01016227.1:subseq(1,5808)	GeneWise	cds	2691	2765	0.00	+	0	JARO01016227.1:subseq(1,5808)-genewise-prediction-1
JARO01016227.1:subseq(1,5808)	GeneWise	intron	2766	3139	0.00	+	.	JARO01016227.1:subseq(1,5808)-genewise-prediction-1
JARO01016227.1:subseq(1,5808)	GeneWise	cds	3140	3214	0.00	+	0	JARO01016227.1:subseq(1,5808)-genewise-prediction-1
//