genewise output Score 195.01 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info 34 WPKTFPEEELRKRLTPMQYHVTQQKGTE WP F +EELR+RLTPMQ+HVTQ+ GTE WPLEFSQEELRQRLTPMQFHVTQEAGTE JARO01008501.1:13326 tccgttcggcccccacactcgacgggag gctatcaaatgagtcctatatcaacgca gaggtgggggggtcccggctgcagtctg 62 AFTGKYVDNKEEGTYHCVVCGAP F G++ D+KE+GTY CVVC +P S:R[agg] PFEGEFTDHKEKGTYTCVVCRSP JARO01008501.1:13410 AGGTGGGTC Intron 1 CAGGctgggtagcagagatatggtatc <2-----[13412:13519]-2> ctagatcaaaaagcacgttggcc ctgggcttcggggctattgtggt 86 LF SEKKFDSGS LF S+KKFDS S LF M:S[agc] SDKKFDSRS JARO01008501.1:13590 ttAGGTGAGTC Intron 2 CAGCtgaatgtct tt <2-----[13598:13859]-2> caaatacgc gc ttggtccta 98 WPSFFDLINKDAIAQTDDFSYGM WPSFFDL+++D+I T D SYGM G:G[gga] WPSFFDLLDEDSITLTPDSSYGM JARO01008501.1:13888 GGTAAATT Intron 3 CAGGAtctttgccgggtaatacgtttga <1-----[13889:14268]-1> gccttattaaactctccaccagt gcgcttgctgttctaaacagctg 122 HRVETTCSQ CGAHLGHLFDDGPRPTK HRVET+CSQ CGAHLGH+FDDGPRPT HRVETSCSQ CGAHLGHVFDDGPRPTG JARO01008501.1:14340 caggaatacGTAAAAG Intron 4 CAGtggccgcgtgggcccag agtacggga<0-----[14367:14455]-0>ggcatgattaagcgccg caggccttg ttcctacgtttctgagg 148 KRYCINSASLSFQPKN KRYCINSA+LSF PK+ KRYCINSAALSFCPKD JARO01008501.1:14507 acttaatggttttcag agagtaccctctgcaa gccccctctacctcat // Making a R in phase 2 intron Making a S in phase 2 intron Making a G in phase 1 intron >JARO01008501.1:subseq(1,27523).pep WPLEFSQEELRQRLTPMQFHVTQEAGTERPFEGEFTDHKEKGTYTCVVCRSPLFSSDKKF DSRSGWPSFFDLLDEDSITLTPDSSYGMHRVETSCSQCGAHLGHVFDDGPRPTGKRYCIN SAALSFCPKD // >JARO01008501.1:subseq(1,27523).[13326:14554].sp TGGCCACTGGAGTTTTCGCAGGAGGAGCTGCGGCAGCGTCTCACCCCCATGCAGTTCCAT GTGACCCAAGAGGCTGGCACTGAGAGGCCCTTTGAGGGGGAGTTCACTGATCACAAGGAG AAGGGGACCTATACATGTGTTGTGTGTAGGTCGCCTTTGTTCAGCTCTGATAAGAAGTTT GACTCCCGTTCAGGATGGCCCTCGTTCTTTGATCTGCTCGATGAGGATTCTATCACTTTA ACACCAGACTCATCGTACGGTATGCACAGAGTGGAGACCAGCTGTAGTCAGTGTGGTGCC CACCTTGGACACGTGTTTGATGATGGCCCTCGGCCAACGGGGAAGCGCTACTGCATCAAC TCTGCCGCTTTATCCTTCTGTCCCAAAGAT // JARO01008501.1:subseq(1,27523) GeneWise match 13326 14554 195.01 + . JARO01008501.1:subseq(1,27523)-genewise-prediction-1 JARO01008501.1:subseq(1,27523) GeneWise cds 13326 13411 0.00 + 0 JARO01008501.1:subseq(1,27523)-genewise-prediction-1 JARO01008501.1:subseq(1,27523) GeneWise intron 13412 13519 0.00 + . JARO01008501.1:subseq(1,27523)-genewise-prediction-1 JARO01008501.1:subseq(1,27523) GeneWise cds 13520 13597 0.00 + 1 JARO01008501.1:subseq(1,27523)-genewise-prediction-1 JARO01008501.1:subseq(1,27523) GeneWise intron 13598 13859 0.00 + . JARO01008501.1:subseq(1,27523)-genewise-prediction-1 JARO01008501.1:subseq(1,27523) GeneWise cds 13860 13888 0.00 + 1 JARO01008501.1:subseq(1,27523)-genewise-prediction-1 JARO01008501.1:subseq(1,27523) GeneWise intron 13889 14268 0.00 + . JARO01008501.1:subseq(1,27523)-genewise-prediction-1 JARO01008501.1:subseq(1,27523) GeneWise cds 14269 14366 0.00 + 2 JARO01008501.1:subseq(1,27523)-genewise-prediction-1 JARO01008501.1:subseq(1,27523) GeneWise intron 14367 14455 0.00 + . JARO01008501.1:subseq(1,27523)-genewise-prediction-1 JARO01008501.1:subseq(1,27523) GeneWise cds 14456 14554 0.00 + 0 JARO01008501.1:subseq(1,27523)-genewise-prediction-1 //