genewise output
Score 55.54 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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                 192 LEGATFWLEQTGFEFDMLLDTERT                       VY 
                     L G    L+ TG ++DM+LD ER                        VY 
                     LPGGCSILQGTGCKYDMVLDLERK                       VY 
JARO01002042.1:48815 ccggttaccgagtatgagtgtgaaGTGAGGA  Intron 1   TAGgt 
                     tcgggcttagcggaaatttataga<0-----[48887:49029]-0>ta 
                     ctaccgaggcgtcgtcgggcgagg                       tc 


                 218 KMFGLGSSMSKVMKFKLMFHYSEIMAMNRTLPEMPPQFIEDLFQ      
                     + FG+GSS +KV+KF  ++ Y+++   ++  P   P++IED++Q      
                     RTFGVGSSYTKVLKFHHVLRYAKLPVSSKAFPLADPRLIEDMYQ      
JARO01002042.1:49036 aatgggtttaagcatccgcctgaccgtaagtccggcccaggatc      
                     gctgtgccacattataattgacatctcgactctcacgttaataa      
                     aataggggcaagtacctctgtagtggccagttcatttcaacgtg      


                 262                        MGGDFVLEQDGKVIFSYRCKSP     
                                            +GG+FVL+   KVI+ +RC SP     
                                            LGGNFVLDDTEKVIYPHRCGSP     
JARO01002042.1:49168 GTCAGAA  Intron 2   AAGcggatgtggagagatccctgac     
                     <0-----[49168:50005]-0>tggatttaacaattacaggggc     
                                            gtctccgcccggcccccccact     


//
>JARO01002042.1:subseq(22604,100113).pep
LPGGCSILQGTGCKYDMVLDLERKVYRTFGVGSSYTKVLKFHHVLRYAKLPVSSKAFPLA
DPRLIEDMYQLGGNFVLDDTEKVIYPHRCGSP
//
>JARO01002042.1:subseq(22604,100113).[48815:50071].sp
CTCCCTGGAGGCTGCTCGATACTGCAGGGCACGGGTTGCAAGTATGACATGGTGTTGGAC
TTGGAAAGGAAGGTTTACAGAACATTTGGAGTGGGGTCGTCGTACACAAAAGTGCTTAAA
TTCCACCATGTCCTTCGGTATGCAAAGCTTCCGGTGTCCAGCAAAGCGTTTCCTCTCGCA
GATCCTCGTCTCATAGAAGACATGTATCAGCTGGGTGGCAATTTCGTCTTGGACGACACC
GAGAAGGTCATCTACCCCCACCGCTGCGGAAGCCCT
//
JARO01002042.1:subseq(22604,100113)	GeneWise	match	48815	50071	55.54	+	.	JARO01002042.1:subseq(22604,100113)-genewise-prediction-1
JARO01002042.1:subseq(22604,100113)	GeneWise	cds	48815	48886	0.00	+	0	JARO01002042.1:subseq(22604,100113)-genewise-prediction-1
JARO01002042.1:subseq(22604,100113)	GeneWise	intron	48887	49029	0.00	+	.	JARO01002042.1:subseq(22604,100113)-genewise-prediction-1
JARO01002042.1:subseq(22604,100113)	GeneWise	cds	49030	49167	0.00	+	0	JARO01002042.1:subseq(22604,100113)-genewise-prediction-1
JARO01002042.1:subseq(22604,100113)	GeneWise	intron	49168	50005	0.00	+	.	JARO01002042.1:subseq(22604,100113)-genewise-prediction-1
JARO01002042.1:subseq(22604,100113)	GeneWise	cds	50006	50071	0.00	+	0	JARO01002042.1:subseq(22604,100113)-genewise-prediction-1
//