genewise output Score 105.31 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info 49 RVYGRNAVVVREALADSHPELKVMINPHNPRRNSFEITLMDGER RVY R+A +REAL S+PELKV+INP PRRNSFE+TL+ + RVYSRHAEGLREALEASNPELKVQINPEKPRRNSFEVTLFGEGK JARO01002064.1:23837 cgtaccgggcaggcggtacgcagcaacgacccaatggactggga gtaggacagtgactaccacatatatacaacggagtatcttgaga acccttaggaaacgaaactatgggtttggcgccctgctgttaca 93 DVLWSGIKKGPPRKLKFPEPAEV LWSGIKKGPPRKLKFP+PA V A:E[gag] VCLWSGIKKGPPRKLKFPDPAVV JARO01002064.1:23969 GGTGAGTG Intron 1 TAGAGgtcttgaaagcccacatcgcggg <1-----[23970:24433]-1> tgtgcgtaagccgatatcacctt tttgacagacctcgggccttagg 117 VTALKQALE V++L++ L+ VSSLQEVLK JARO01002064.1:24505 gttccggca tcctaatta gttagggga // Making a E in phase 1 intron >JARO01002064.1:subseq(1,74531).pep RVYSRHAEGLREALEASNPELKVQINPEKPRRNSFEVTLFGEGKEVCLWSGIKKGPPRKL KFPDPAVVVSSLQEVLK // >JARO01002064.1:subseq(1,74531).[23837:24531].sp CGAGTCTACAGCCGTCATGCAGAGGGGCTAAGAGAAGCCCTGGAAGCATCAAACCCTGAA CTTAAGGTGCAGATTAATCCTGAGAAGCCCCGGCGCAACAGCTTTGAGGTCACTCTGTTT GGTGAAGGCAAAGAGGTTTGTCTTTGGTCAGGCATAAAGAAAGGCCCCCCTCGCAAGCTG AAGTTCCCCGATCCTGCAGTGGTGGTGTCTTCTCTACAGGAGGTGCTGAAA // JARO01002064.1:subseq(1,74531) GeneWise match 23837 24531 105.31 + . JARO01002064.1:subseq(1,74531)-genewise-prediction-1 JARO01002064.1:subseq(1,74531) GeneWise cds 23837 23969 0.00 + 0 JARO01002064.1:subseq(1,74531)-genewise-prediction-1 JARO01002064.1:subseq(1,74531) GeneWise intron 23970 24433 0.00 + . JARO01002064.1:subseq(1,74531)-genewise-prediction-1 JARO01002064.1:subseq(1,74531) GeneWise cds 24434 24531 0.00 + 2 JARO01002064.1:subseq(1,74531)-genewise-prediction-1 //