genewise output Score 145.11 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info 1 MVYVSN QVLDSRSRSPWSLSFLT MVYVSN QVLD+RS+SPW LSFLT MVYVSN G:G[ggt] QVLDNRSQSPWRLSFLT JARO01006671.1:32786 agtgtaGGTGAGTA Intron 1 CAGGTcgcgaaactctatttca ttatca <1-----[32805:33369]-1> attaaggaccggtcttc ggcgat gggccgtgtcgggtcat 25 DFFWGAVEFIGL FQTLVQPDLSK D+FWGAVEFIGL FQTL QPDLSK DLFWGAVEFIGL F:F[ttc] FQTLFQPDLSK JARO01006671.1:33423 gcttggggtagtTTGTAAGTG Intron 2 TAGCtcattccgcta attggctattgt <2-----[33461:33610]-2> tacttacatca cccgtggacagg tgaatacccag 49 DGNNSASSRFSDGR PPGFPGRRR +GN+ +SSR+ DGR PPGFP RR NGNSRSSSRYDDGR G:G[ggc] PPGFPRPRR JARO01006671.1:33645 agatatttatgggaGGGTAAGCA Intron 3 TAGCccgtcacca agacgcccgaaagg <2-----[33689:33991]-2> ccgtcgcgg taccatcaatttca atgtaaaga 73 MGRINHGAGPTPPPMGGGG MGRINHG GP+ PPMGGGG MGRINHGGGPSAPPMGGGG JARO01006671.1:34020 agaaacgggcagccagggg tggtaagggcgccctgggg ggaatcaaaatccagaaaa // Making a G in phase 1 intron Making a F in phase 2 intron Making a G in phase 2 intron >JARO01006671.1:subseq(1,63138).pep MVYVSNGQVLDNRSQSPWRLSFLTDLFWGAVEFIGLFFQTLFQPDLSKNGNSRSSSRYDD GRGPPGFPRPRRMGRINHGGGPSAPPMGGGG // >JARO01006671.1:subseq(1,63138).[32786:34076].sp ATGGTGTACGTGTCAAATGGTCAGGTGCTGGACAACAGGAGTCAGTCTCCCTGGAGGTTG TCTTTCCTAACTGACCTCTTCTGGGGTGCGGTGGAATTCATAGGGTTGTTCTTTCAGACA TTATTTCAACCCGACCTCTCAAAGAATGGAAACTCCAGATCTTCCTCAAGATATGATGAT GGCAGAGGCCCACCTGGGTTTCCAAGACCACGGAGAATGGGGAGAATAAATCACGGAGGA GGACCAAGTGCCCCCCCAATGGGAGGAGGAGGA // JARO01006671.1:subseq(1,63138) GeneWise match 32786 34076 145.11 + . JARO01006671.1:subseq(1,63138)-genewise-prediction-1 JARO01006671.1:subseq(1,63138) GeneWise cds 32786 32804 0.00 + 0 JARO01006671.1:subseq(1,63138)-genewise-prediction-1 JARO01006671.1:subseq(1,63138) GeneWise intron 32805 33369 0.00 + . JARO01006671.1:subseq(1,63138)-genewise-prediction-1 JARO01006671.1:subseq(1,63138) GeneWise cds 33370 33460 0.00 + 2 JARO01006671.1:subseq(1,63138)-genewise-prediction-1 JARO01006671.1:subseq(1,63138) GeneWise intron 33461 33610 0.00 + . JARO01006671.1:subseq(1,63138)-genewise-prediction-1 JARO01006671.1:subseq(1,63138) GeneWise cds 33611 33688 0.00 + 1 JARO01006671.1:subseq(1,63138)-genewise-prediction-1 JARO01006671.1:subseq(1,63138) GeneWise intron 33689 33991 0.00 + . JARO01006671.1:subseq(1,63138)-genewise-prediction-1 JARO01006671.1:subseq(1,63138) GeneWise cds 33992 34076 0.00 + 1 JARO01006671.1:subseq(1,63138)-genewise-prediction-1 //