genewise output Score 186.20 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info 44 KTKDFYSYEVKDARGRTVSLEKYRGK K KDFY+++V ++RG+ VSLEKYRG KQKDFYTFKVVNSRGKLVSLEKYRGS JARO01003584.1: 532 acagttataggaaagacgtcgatagtGTAAGTA Intron 1 CAG aaaatactattagggattctaaaggc<0-----[610 : 4344]-0> gaattcatatttcagggggggacggg 70 VSLVVNVASGSELTEQSYRALQELHRELGTSHFNVLAFPCSQYGDTESG VSLVVNVAS TE+ Y LQ+L R+ G HFNVLAFPC+Q+G E G VSLVVNVASECGYTEEHYTDLQQLQRDFGPYHFNVLAFPCNQFGQQEPG JARO01003584.1: 4345 gtcggaggagtgtaggctagccccccgtgctctagcgtctactgccgcg tctttatcgaggacaaaacataatagatgcaatattctcgaatgaaacg gagggtgttatccaggcctccggcgactgaccctggccttcgtcgagtc 119 TSREIEAFAKSNYGVTFPIFNKIKIMGSEAEPAFRFLT + +EI++F + YGVTFP+F+KI ++G+ A AF++L SDKEIDSFVRRVYGVTFPLFSKIAVVGTGANNAFKYLV JARO01003584.1: 4492 agagagatgccgtggatcctaaaggggaggaagtatcg gaaatagttggtagtctcttgatcttgcgcaactaatt tcagtcctgcggtatcctcctgtagtatgccttcatgt 157 SVQKIPKWNFWKFLVSPEGQVVR S K P WNFWK+L+ G+VV D:E[gag] SSGKQPDWNFWKYLIDVNGKVVN JARO01003584.1: 4606 GGTAAGTG Intron 2 CAGAGttgaccgtattatcaggagagga <1-----[4607 : 5115]-1> ccgaacagatgaattatagatta ataggacgtcggtattgtaaagt 181 FWKPEEPVSDIRKEATTLVRNIILKKRQEL W P V +IR + ++R IILKK+ EL AWGPNTSVKEIRPQIAEMIRQIILKKKVEL JARO01003584.1: 5187 gtgcaatgagaaccaggaaccaacaaaggc cggcacctaatgcatcattgatttaaatat tggttctcggcatgttagcagctaggaggg // Making a E in phase 1 intron >JARO01003584.1:subseq(1,55276).pep KQKDFYTFKVVNSRGKLVSLEKYRGSVSLVVNVASECGYTEEHYTDLQQLQRDFGPYHFN VLAFPCNQFGQQEPGSDKEIDSFVRRVYGVTFPLFSKIAVVGTGANNAFKYLVESSGKQP DWNFWKYLIDVNGKVVNAWGPNTSVKEIRPQIAEMIRQIILKKKVEL // >JARO01003584.1:subseq(1,55276).[532:5276].sp AAGCAAAAAGATTTTTACACATTTAAAGTTGTTAATAGCAGAGGGAAGCTGGTGTCGCTG GAGAAATACAGGGGGTCGGTGTCACTGGTGGTGAATGTGGCTAGTGAATGTGGCTACACA GAGGAGCACTACACTGACCTCCAGCAGCTCCAGCGAGACTTTGGGCCATACCACTTCAAT GTGCTGGCCTTCCCTTGTAACCAGTTTGGCCAGCAAGAGCCTGGCAGTGACAAAGAGATT GACAGCTTTGTGCGCCGGGTGTATGGAGTTACCTTCCCTCTCTTCAGTAAGATTGCAGTG GTTGGAACTGGGGCCAACAATGCTTTCAAATATCTGGTTGAGTCATCTGGAAAGCAGCCA GACTGGAATTTCTGGAAGTATCTAATTGATGTGAATGGAAAAGTAGTGAATGCTTGGGGG CCTAATACCTCTGTCAAGGAGATCAGACCTCAGATTGCTGAAATGATCCGACAGATCATT CTAAAGAAGAAAGTGGAGCTG // JARO01003584.1:subseq(1,55276) GeneWise match 532 5276 186.20 + . JARO01003584.1:subseq(1,55276)-genewise-prediction-1 JARO01003584.1:subseq(1,55276) GeneWise cds 532 609 0.00 + 0 JARO01003584.1:subseq(1,55276)-genewise-prediction-1 JARO01003584.1:subseq(1,55276) GeneWise intron 610 4344 0.00 + . JARO01003584.1:subseq(1,55276)-genewise-prediction-1 JARO01003584.1:subseq(1,55276) GeneWise cds 4345 4606 0.00 + 0 JARO01003584.1:subseq(1,55276)-genewise-prediction-1 JARO01003584.1:subseq(1,55276) GeneWise intron 4607 5115 0.00 + . JARO01003584.1:subseq(1,55276)-genewise-prediction-1 JARO01003584.1:subseq(1,55276) GeneWise cds 5116 5276 0.00 + 2 JARO01003584.1:subseq(1,55276)-genewise-prediction-1 //