genewise output
Score 239.66 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000641_2.0   15 TPLERLKFNNVALKALPVDS-SLEPGSRTVKAACFSLVKP-QALIKPTI 
                     T LERL+F + AL+ LP+D  S   GSRTV  ACFSL+   Q L +P + 
                     TALERLRFTHTALQRLPLDEHSDRAGSRTVPGACFSLLHCLQPLPRPEL 
KN481390.1     45291 agcgccctacagccccccggctgcggtaagcggtttccctcccccccgc 
                     cctagtgtcacctagtctaaacagcgcgctcgcgtcttagtactcgcat 
                     atggggccccacgggccgtgcacgaccggccggccccccccgcgcggag 


SPP00000641_2.0   62 VALSGPALALLGLKVEDVLQDPHAAEYLSGSRLIQGSE            
                     VA+SG ALALLGL  E VL DP AAEYLSGSRLI G++            
                     VAVSGFALALLGLTPEQVLGDPRAAEYLSGSRLIPGAK            
KN481390.1     45438 gggtgtgtgccgcacgcgcggccgggtcagtccacgga            
                     tctcgtctcttgtccaattgacgccaatggcgttcgca            
                     gggcgtgaggctgtagggctctagggcccaaattcaag            


SPP00000641_2.0  100                        PAAHCYCGHQFGQFAGQLGDGAVCYL 
                                             AAHCY GHQFG FAGQLGDGAV  L 
                                            LAAHCYSGHQFGLFAGQLGDGAVMCL 
KN481390.1     45552 GTGAGAG  Intron 1   CAGcggcttagcctgctggccgggggatt 
                     <0-----[45552:46373]-0>tccagaggaatgttcgatgagcttgt 
                                            ggaccccgtgttgtctgcatagcgtg 


SPP00000641_2.0  126 GEVEVEVGAEQTTDPNRTSPCGRWEIQVKGAGLTPYS             
                     GEV  E    Q+           WE+Q+KGAG TPYS             
                     GEVREE---DQS-----------WEVQLKGAGTTPYS             
KN481390.1     46452 gggcgg   gca           tggccagggaactt             
                     gatgaa   aag           gatatagcgcccac             
                     aaggag   cgc           ggaagggagtaacc             


SPP00000641_2.0  163                           LSDGRKVLRSSIREFLCSEAMFA 
                                                 DGRK LRSS+REFLCSEAM + 
                                R:R[aga]       DGDGRKALRSSVREFLCSEAMAS 
KN481390.1     46521 AGGTAAACT  Intron 2   CAGAggggaagcctagcgtttaggagt 
                       <2-----[46523:47859]-2> agaggactgcgtgattggactcc 
                                               tacgggtccctgtgcgctacggt 


SPP00000641_2.0  187 LGIPTTRAGSLVTSDLYVQRDEFYSGNPKPERCSVVLRIAPTFIRF    
                     LGIPTTRA S+VTSDL VQRD         ERC+V++R+AP+FIR+    
                     LGIPTTRAVSIVTSDLCVQRDPHKDSCRVSERCAVIMRVAPSFIRY    
KN481390.1     47930 cgacaacggtagatgctgcagccagatcgtgctggaaaggcttaat    
                     tgtcccgctcttccatgtagacaaagggtcaggctttgtcccttga    
                     gcctgcaccctgctccttaacacaccccgtagccccgagtcttcgt    


//
>KN481390.1.[45291:48067].sp
ACAGCTCTGGAGCGGCTGCGCTTCACCCACACAGCCCTGCAGCGGCTCCCCCTGGATGAG
CACTCAGACCGGGCAGGCTCCAGGACGGTCCCCGGGGCGTGCTTCTCCCTCCTCCACTGC
CTCCAGCCCCTGCCCCGGCCGGAACTGGTGGCGGTGTCCGGGTTTGCGTTAGCGCTGCTC
GGTCTGACTCCAGAGCAGGTGCTCGGTGACCCTCGAGCGGCGGAGTACCTCAGCGGATCA
CGACTTATTCCCGGAGCAAAGCTGGCGGCACACTGCTACAGCGGGCATCAGTTTGGTCTG
TTTGCCGGTCAGCTCGGAGATGGAGCGGTCATGTGTTTGGGAGAAGTGCGGGAAGAGGAC
CAGAGCTGGGAGGTACAACTGAAGGGGGCAGGGACTACACCATACTCCAGAGATGGAGAC
GGGAGGAAGGCTCTCCGCTCCAGTGTGCGTGAGTTCTTGTGCAGTGAAGCCATGGCGTCT
CTGGGCATCCCTACGACCCGAGCCGTCTCCATTGTGACCTCTGACCTCTGTGTTCAAAGA
GACCCACACAAAGACAGCTGCCGCGTGTCTGAACGGTGCGCCGTCATCATGAGAGTGGCT
CCCTCTTTTATCAGGTAT
//
KN481390.1	GeneWise	match	45291	48067	251.64	+	.	KN481390.1-genewise-prediction-1
KN481390.1	GeneWise	cds	45291	45551	0.00	+	0	KN481390.1-genewise-prediction-1
KN481390.1	GeneWise	intron	45552	46373	0.00	+	.	KN481390.1-genewise-prediction-1
KN481390.1	GeneWise	cds	46374	46522	0.00	+	0	KN481390.1-genewise-prediction-1
KN481390.1	GeneWise	intron	46523	47859	0.00	+	.	KN481390.1-genewise-prediction-1
KN481390.1	GeneWise	cds	47860	48067	0.00	+	1	KN481390.1-genewise-prediction-1
//