genewise output
Score 140.33 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000663_2.0   20 LCVLCGLPAAGKSTFARALAHRLQQEQGWAIGVVAYDDVMP-DAFLAGA 
                     L VLCGLPA GKST+AR L        GW I  V+YD+++P  AFLA   
                     LVVLCGLPAVGKSTLAREL-REAAAGLGWRITAVSYDELIPEEAFLA-- 
KN474861.1    -21503 cggctgtcgggatacgagc cgggggcgtaaaggatggcacgggtcg   
                     ttttggtcctgacctcgat gacccgtgggtcctgaaattcaacttc   
                     gtcgctggtatgcggcggc aacgggcaggacggcctggcggagtac   


SPP00000663_2.0   68 RARPAPS                          WKLLRQELLKYLEYFL 
                                                      WK  RQ +LK +E+FL 
                     ------R          Q:Q[cag]        WKQHRQAVLKCIEHFL 
KN474861.1    -21365       cCGTGTGGA  Intron 1   CAGAGtaccccggtatagctc 
                           g <1-----[21361:20727]-1>  gaaagacttagtaatt 
                           g                          gggttgcgaattaccg 


SPP00000663_2.0   92 MAVINGCQMSVPPNRTEAMWEDFITCLKDQDLIFSAAFEAQSCYLLTKT 
                      +          P+  ++   DF       D+I + ++E     LL  + 
                     DS----------PSTDQSDLPDFC------DIINNGSWERCVQDLLQPS 
KN474861.1    -20676 ga          caagctgccgtt      gaaaagttgatgcgcccct 
                     ag          cgcaacatcatg      attaagcgaggtaattacc 
                     ct          gctcaatcgtct      ctactaagaatcgctcata 


SPP00000663_2.0  141 AVSRPLFLVLDDNFYYQSMRYEVYQLARK                     
                         P++ +LDDNFYY SMRYEVYQLARK                     
                     PKPSPVIFLLDDNFYYPSMRYEVYQLARK                     
KN474861.1    -20577 cactcgatccggatttcaaatggtccgaa                     
                     caccctttttaaataacgtgaataatcga                     
                     cattagttagccccccccgatgccacaga                     


SPP00000663_2.0  170                           SLGFCQLFLDCPLETCLQRNGQR 
                                               SLGFCQLFL C LETC++RN +R 
                               Y:H[cac]        SLGFCQLFLHCDLETCIRRNQRR 
KN474861.1    -20490 CGTGAGTA  Intron 2   CAGACttgttcctcctgtgatacaacaa 
                      <1-----[20489:19709]-1>  ctgtgatttagatacgtggaagg 
                                               agcctgcttctcggctctacggg 


SPP00000663_2.0  194 PQALPPETIHLMGRKLEKPNPEKNAWEHNSLTI-PSPACASEA       
                      + +P E +  M R+L+ PN ++N WE NS+ I  +    +E        
                     AEPVPSEVMEEMERRLQPPNAQRNTWETNSIRINTNDRLNTED       
KN474861.1    -19637 ggcgctggaggagacccccagcaaatgaaaaaaaaagacaagg       
                     cactccattaataggtaccacagacgacagtgtacaagtacaa       
                     ggttccgcgggggatggttccaacagggcccactaccgtctac       


SPP00000663_2.0  236                           LEVTDLLLTALENPVKYAEDNME 
                                                EV DL+  AL+NP+   EDN E 
                                S:I[ata]       QEVVDLISFALKNPLSPIEDNTE 
KN474861.1    -19508 ATGTGAGAA  Intron 3   CAGAcggggcattgcaaccacaggaag 
                       <2-----[19506:18881]-2> aattattctctaactgctaaaca 
                                               ggggtgcgtaggctgcctaccaa 


SPP00000663_2.0  260 QKD                          -------TDRIICSTNILHK 
                     QK                                   DR+ C+ +++H+ 
                     QKA          -:V[gtc]        CPCVFQEADRVKCANSVMHQ 
KN474861.1    -18810 cagGGTTAGCC  Intron 4   AAGTCtctgtcgggagatgaagacc 
                     aac <1-----[18800:17572]-1>  gcgttaacagtagcagttaa 
                     agc                          cttttggtcagatcctggcg 


SPP00000663_2.0  276 TDQTLRRIVSQTMKEAKG                                
                      DQ  R+++S+ M  A+G                                
                     ADQACRKLISEAMTTARG                                
KN474861.1    -17509 ggcgtaacatggaaagag                                
                     caacggattcactcccgg                                
                     atgctgacctacgggcat                                


//
>KN474861.1.[21503:17454].sp
CTGGTTGTCCTGTGCGGTTTGCCGGCTGTAGGTAAGTCCACGCTGGCCAGGGAGCTCCGA
GAAGCCGCGGCGGGGCTCGGATGGAGGATAACCGCGGTGAGCTACGATGAGCTGATCCCG
GAGGAAGCGTTTCTAGCCCGGCAGTGGAAGCAGCATCGTCAGGCCGTGTTAAAATGTATT
GAACACTTCCTGGACAGTCCGAGCACTGACCAATCAGATCTCCCGGATTTCTGTGACATT
ATAAACAATGGATCATGGGAAAGATGTGTCCAGGACCTTCTCCAACCTTCACCCAAACCT
TCTCCAGTGATTTTTCTACTGGACGACAACTTCTACTACCCCAGCATGAGATATGAGGTC
TACCAACTCGCAAGGAAACACTCATTGGGCTTCTGTCAGCTCTTTCTTCACTGTGACTTG
GAGACCTGTATCCGTAGAAACCAGAGGAGGGCGGAGCCTGTTCCCTCCGAGGTCATGGAG
GAGATGGAGAGACGTCTGCAGCCTCCTAACGCCCAAAGAAACACATGGGAGACGAACAGC
ATCAGAATCAATACAAACGACAGGCTTAACACTGAAGACATACAGGAGGTGGTGGATCTG
ATCTCGTTTGCACTGAAGAACCCTCTGAGCCCCATTGAAGACAACACAGAACAAAAGGCC
GTCTGCCCTTGTGTTTTTCAGGAGGCTGACAGAGTGAAATGTGCCAACAGTGTGATGCAC
CAGGCAGATCAGGCCTGTAGGAAACTCATCTCTGAAGCCATGACGACGGCCAGAGGT
//
KN474861.1	GeneWise	match	21503	17456	167.28	-	.	KN474861.1-genewise-prediction-1
KN474861.1	GeneWise	cds	21503	21362	0.00	-	0	KN474861.1-genewise-prediction-1
KN474861.1	GeneWise	intron	21361	20727	0.00	-	.	KN474861.1-genewise-prediction-1
KN474861.1	GeneWise	cds	20726	20490	0.00	-	2	KN474861.1-genewise-prediction-1
KN474861.1	GeneWise	intron	20489	19709	0.00	-	.	KN474861.1-genewise-prediction-1
KN474861.1	GeneWise	cds	19708	19507	0.00	-	2	KN474861.1-genewise-prediction-1
KN474861.1	GeneWise	intron	19506	18881	0.00	-	.	KN474861.1-genewise-prediction-1
KN474861.1	GeneWise	cds	18880	18801	0.00	-	1	KN474861.1-genewise-prediction-1
KN474861.1	GeneWise	intron	18800	17572	0.00	-	.	KN474861.1-genewise-prediction-1
KN474861.1	GeneWise	cds	17571	17456	0.00	-	2	KN474861.1-genewise-prediction-1
//