genewise output
Score 206.72 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000652_2.0   34 TDVFLSKPQKAALEYLEDIDLKTLEK                        
                     TD FL+ P KA L++LE+ +L TL+                         
                     TDPFLTPPLKATLKHLEEAELTTLQG          E:E[gag]      
KN471901.1     38989 agcttacccagacactggggcaaccgGGTGAGGT  Intron 1      
                     cacttccctacctaataacatcctag <1-----[39068:40009]   
                     tttcggtggaatggtgggcgcgtgaa                        


SPP00000652_2.0   60      PRTFKAKELWEKNGAVIMAVRRPGCFLCRE               
                           R+FKAK LWE  GAV+MAVRRPG FLCRE               
                          KRSFKAKSLWENTGAVVMAVRRPGXFLCRE               
KN471901.1     40007 CAGAGaattagatttgaaggggaggcacgttttag               
                     -1>  agctacactgaacgctttctggcggttgga               
                          agtcatacgggctatgtgtcgatgatgcag               


SPP00000652_2.0   91                        EAADLSSLKSMLDQLGVPLYAVVKEH 
                                            EAA+LSSLK  LD+ GVPLYAVVKE  
                                            EAAELSSLKPELDEFGVPLYAVVKED 
KN471901.1     40102 GTATTGT  Intron 2   TAGggggcttcacgcggtggcttgggagg 
                     <0-----[40102:40659]-0>accatcctacataatgtctacttaaa 
                                            gtaggctgatgctgtgctgctggggc 


SPP00000652_2.0  117 IRTEVKDFQPYFKGEIFLDEK                       KKFYG 
                     + TEV++F+P+FKGEIFLDEK                       ++FYG 
                     VGTEVQNFRPFFKGEIFLDEK                       RRFYG 
KN471901.1     40738 ggaggcatacttaggattggaGTAATAT  Intron 3   CAGaattg 
                     tgcataatgcttagatttaaa<0-----[40801:41750]-0>ggtag 
                     ctcgcaccaaccagaccgtag                       ggtta 


SPP00000652_2.0  143 PQRRKMMFMGFIRLGVWYNFFRAWNGGFSGNLEGEGFILGGVFVVGSGK 
                     P+ R+M ++GF+R+GVW + +RA+  GF GN+ GEGF+LGGVFV+G G+ 
                     PRERRMGLLGFLRVGVWASGLRAFRKGFMGNVFGEGFVLGGVFVIGRGQ 
KN471901.1     41766 ccgcaagccgtcagggtgagtagtaagtagagtgggtgcgggtgagagc 
                     cgaggtgttgttgtgtgcggtgctgagttgattgagtttggttttggga 
                     aaggggtgggccgtacggtcggatagccgatctaaatcgtactttgaaa 


SPP00000652_2.0  192 Q                       GILLEHREKEFGDKVNLLSVLEAAK 
                     Q                       GILLEHRE EFGDKVN+  V+EA + 
                     Q                       GILLEHREIEFGDKVNIKDVIEAVR 
KN471901.1     41913 cGTAAAGT  Intron 4   CAGgactgccgagtggagaaaggaggga 
                     a<0-----[41916:41987]-0>gtttaagatatgaatataattactg 
                     g                       atggacaatgtacacttgtctataa 


SPP00000652_2.0  218 MI                                                
                      +                                                
                     RM                                                
KN471901.1     42063 aa                                                
                     gt                                                
                     ag                                                


//
>KN471901.1.[38989:42068].sp
ACTGATCCTTTCTTGACGCCTCCGCTGAAAGCAACTCTGAAGCATTTGGAGGAGGCCGAG
CTCACGACTCTGCAAGGAGAGAAAAGGTCTTTCAAAGCTAAATCCTTGTGGGAGAACACT
GGAGCTGTGGTTATGGCTGTCCGGAGACCTGGGTGATTTTTGTGCAGAGAGGAGGCTGCA
GAGCTGTCCTCTCTGAAACCTGAGCTCGATGAGTTTGGGGTCCCTTTGTACGCTGTGGTG
AAGGAGGACGTCGGTACCGAGGTCCAAAACTTCAGACCATTCTTCAAAGGGGAAATCTTC
TTGGATGAAAAGAGGAGGTTTTATGGACCACGAGAGCGGAGGATGGGTCTGCTGGGGTTC
CTCAGGGTTGGAGTCTGGGCGAGTGGCTTGAGGGCATTTAGAAAGGGCTTCATGGGAAAT
GTCTTTGGAGAAGGATTTGTCCTGGGTGGAGTCTTTGTTATTGGGAGAGGACAACAGGGA
ATTCTGTTGGAACACCGAGAAATTGAGTTTGGAGACAAAGTCAATATTAAGGATGTCATT
GAAGCTGTAAGAAGAATG
//
KN471901.1	GeneWise	match	38989	42068	206.72	+	.	KN471901.1-genewise-prediction-1
KN471901.1	GeneWise	cds	38989	39067	0.00	+	0	KN471901.1-genewise-prediction-1
KN471901.1	GeneWise	intron	39068	40009	0.00	+	.	KN471901.1-genewise-prediction-1
KN471901.1	GeneWise	cds	40010	40101	0.00	+	2	KN471901.1-genewise-prediction-1
KN471901.1	GeneWise	intron	40102	40659	0.00	+	.	KN471901.1-genewise-prediction-1
KN471901.1	GeneWise	cds	40660	40800	0.00	+	0	KN471901.1-genewise-prediction-1
KN471901.1	GeneWise	intron	40801	41750	0.00	+	.	KN471901.1-genewise-prediction-1
KN471901.1	GeneWise	cds	41751	41915	0.00	+	0	KN471901.1-genewise-prediction-1
KN471901.1	GeneWise	intron	41916	41987	0.00	+	.	KN471901.1-genewise-prediction-1
KN471901.1	GeneWise	cds	41988	42068	0.00	+	0	KN471901.1-genewise-prediction-1
//