genewise output
Score 223.65 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000647_2.0   25 SGTCRSKKTWPKTFPEEELRKRLTPMQYHVTQQKGTE             
                     +G  R+KKTWP TF +EEL++RLTPMQYHVTQ++GTE             
                     AGARRTKKTWPVTFTKEELKERLTPMQYHVTQERGTE             
JACM01052317.1   809 gggccaaaatcgataaggcagccacactcgacgagag             
                     cgcggcaacgctctcaaataagtcctaaatcaaggca             
                     aaatcgggagtggccaggggggcccggccccggggag             


SPP00000647_2.0   62                           AFTGKYVDNKEEGTYHCVVCGAP 
                                               AFTG+   NK+EGTY CV+CGAP 
                                S:S[agt]       AFTGELTFNKDEGTYSCVLCGAP 
JACM01052317.1   920 AGGTGAGTC  Intron 1   CAGTgtaggcataagggatatgttggc 
                       <2-----[922  : 1029]-2> ctcgatctaaaagcaggttggcc 
                                               gcgagggtcacgctcttggtatg 


SPP00000647_2.0   86 LF                          SEKKFDSGS             
                     LF                          S+ KFDSGS             
                     LF           M:S[agc]       SKTKFDSGS             
JACM01052317.1  1100 ctAGGTGAGAC  Intron 2   CAGCtaaatgtgt             
                     tt  <2-----[1108 : 1181]-2> cacatacgc             
                     cc                          cacatctca             


SPP00000647_2.0   98                           WPSFFDLINKDAIAQTDDFSYGM 
                                               WPSF+DLI KD+I QTDDF+YGM 
                               G:G[ggc]        WPSFYDLITKDSIDQTDDFTYGM 
JACM01052317.1  1210 GGTCAGTC  Intron 3   CAGGCtctttgcaaagtagcaggtatga 
                      <1-----[1211 : 2481]-1>  gcctaattcaactaacaatcagt 
                                               ggccccctcaccccggtccctcg 


SPP00000647_2.0  122 HRVETTCSQ                       CGAHLGHLFDDGPRPTK 
                     HRVETTC+Q                       CGAHLGH+FDDGP+PT+ 
                     HRVETTCAQ                       CGAHLGHVFDDGPKPTR 
JACM01052317.1  2553 ccggaatgcGTGCTGC  Intron 4   CAGtggccgcgtgggcacac 
                     agtaccgca<0-----[2580 : 2989]-0>ggcatgattaagcaccg 
                     ctagcctag                       cattggcgtccacgcga 


SPP00000647_2.0  148 KRYCINSASLSFQPKNSATEEV                            
                     KRYCINSASL+F PK     E+                            
                     KRYCINSASLAFNPKTQTQPEL                            
JACM01052317.1  3041 acttaatgtcgtacaacaccgc                            
                     agagtaccctctacacacacat                            
                     accccctctgccccgcacgaac                            


//
>JACM01052317.1.[809:3106].sp
GCAGGAGCACGTCGCACGAAGAAGACATGGCCTGTGACGTTCACCAAAGAGGAGCTGAAG
GAGCGGCTCACCCCCATGCAGTACCACGTCACCCAGGAGAGGGGGACAGAGAGTGCGTTC
ACGGGAGAGCTGACGTTTAACAAAGACGAGGGCACTTACAGTTGTGTGTTGTGTGGAGCT
CCGCTCTTCAGCTCCAAAACCAAATTTGACTCTGGCTCAGGCTGGCCGTCCTTCTACGAC
CTCATTACCAAAGACTCCATCGACCAGACGGATGACTTCACCTATGGCATGCACCGTGTA
GAGACCACCTGTGCACAGTGCGGAGCTCATCTGGGGCACGTGTTTGACGACGGACCCAAG
CCCACGCGAAAACGCTACTGCATCAACTCTGCCTCTCTGGCCTTCAACCCCAAGACCCAA
ACCCAGCCAGAACTC
//
JACM01052317.1	GeneWise	match	809	3106	223.65	+	.	JACM01052317.1-genewise-prediction-1
JACM01052317.1	GeneWise	cds	809	921	0.00	+	0	JACM01052317.1-genewise-prediction-1
JACM01052317.1	GeneWise	intron	922	1029	0.00	+	.	JACM01052317.1-genewise-prediction-1
JACM01052317.1	GeneWise	cds	1030	1107	0.00	+	1	JACM01052317.1-genewise-prediction-1
JACM01052317.1	GeneWise	intron	1108	1181	0.00	+	.	JACM01052317.1-genewise-prediction-1
JACM01052317.1	GeneWise	cds	1182	1210	0.00	+	1	JACM01052317.1-genewise-prediction-1
JACM01052317.1	GeneWise	intron	1211	2481	0.00	+	.	JACM01052317.1-genewise-prediction-1
JACM01052317.1	GeneWise	cds	2482	2579	0.00	+	2	JACM01052317.1-genewise-prediction-1
JACM01052317.1	GeneWise	intron	2580	2989	0.00	+	.	JACM01052317.1-genewise-prediction-1
JACM01052317.1	GeneWise	cds	2990	3106	0.00	+	0	JACM01052317.1-genewise-prediction-1
//