------- SECIS element -- id:1 -- grade:A ----
 Chromosome = KN906047.1:subseq_591167,100077_ Strand = - Positions = 46134 - 46065
 Found by:  Infernal (score=21.55) Covels (score=24.46)
 Stem2 length = 10   Apical loop length = 10   Insertion in stem2 = 0, 0
 Free Energy = -17.1

         ..(((((((.......(((((((((((((((...............))))))))))))))).........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc
         ..(((((((.--....{[[[({(((((((((........-----..)))))))))})]]]}.....-.-.)))))))..
 target  AUUGGGGACA--UUAAUGAAGAUCUCAGCUGUAAGGUGU-----CCUGGCUGGGAACGGAUGUAAA-U-GGUCUUCAUG
                         ****            ^^                       ****                  

------- SECIS element -- id:2 -- grade:A ----
 Chromosome = KN906047.1:subseq_591167,100077_ Strand = + Positions = 15341 - 15416
 Found by:  Infernal (score=17.04) Covels (score=20.15)
 Stem2 length = 10   Apical loop length = 14   Insertion in stem2 = 0, 0
 Free Energy = -14.2

         ..(((((((.......(((((((((((((((...............)))))))))))))))............)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu---u-uuucaugaccggc
         ..(((((((.--....([[{((((((((((......---........))))))))))}]])........-...)))))))..
 target  AUCUCCACUG--CUUAUGAUUUGAUGGAUUAAAGCU---CAAAAAAGGGUUCAUCAAUGAAAGGUGAAU-AAAAGUGGAGCU
                         ****          ^^^                        ****                     

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = KN906047.1:subseq_591167,100077_ Strand = - Positions = 16172 - 16088
 Found by:  Infernal (score=12.26) Covels (score=7.48)
 Stem2 length = 9   Apical loop length = 14   Insertion in stem2 = 1, 0
 Free Energy = -5.4

         ..(((((((..................((((((((((.(((((...............)))))))))))))))........)))))))..
 model   uucggucaugcg-----------UuaAUGAcGgccug-gcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..(({(({(..................([[{((((((.{(((......---........)))}))))))}]])..--....)}))}))..
 target  CCAGCCAAUUCACUUAUAUAUUAUUUGUGAUGCUGUUUGUGUUAACAC---AGUGUUGCACAGGACAGCUGAACU--CUCCACUGACUUC
                                    ****            ^^                        ****                 

------- SECIS element -- id:4 -- grade:B ----
 Chromosome = KN906047.1:subseq_591167,100077_ Strand = + Positions = 52208 - 52289
 Found by:  Infernal (score=10.52)
 Stem2 length = 10   Apical loop length = 16   Insertion in stem2 = 0, 2
 Free Energy = -10.9

         ..(((((((........(((((((((((((((................))))))).)).)))))).........)))))))..
 model   uucggucaugcg-UuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggcca-gg-cCuGAUGuuu-uuucaugaccggc
         ..((((((.........([[(((((({(((((................)))))}).)).)))]]).....-....))))))..
 target  CACCCUCUAAUAAUUUGUGAGCAGAUUUAGGGAAACCAGGAUUCAAGCUUCUGUACUCUUGUGAAGGAUA-CUAAAGAGGGAU
                          ****           ^^^                          ****