------- SECIS element -- id:1 -- grade:A ----
 Chromosome = KN908874.1:subseq_9827,69188_ Strand = - Positions = 15016 - 14942
 Found by:  Infernal (score=21.01) Covels (score=23.92)
 Stem2 length = 9   Apical loop length = 16   Insertion in stem2 = 0, 0
 Free Energy = -7.3

         ..(((((((.......(((((((((((((((................)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         (({((((((.--....{[[[(({((((({((................))})))))}))]]]}..--....))))))}))
 target  CAAUGAUGUU--GGUAUGAAGGGCACCAUUGAAAGAGGCGCGCUCUCUGUUGGUGGCUGGAUGG--UGUCACAUUGCUG
                         ****           ^^^                        ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = KN908874.1:subseq_9827,69188_ Strand = + Positions = 34991 - 35060
 Found by:  Infernal (score=13.65) Covels (score=5.79)
 Stem2 length = 9   Apical loop length = 11   Insertion in stem2 = 0, 0
 Free Energy = -21.8

         ..(((((((.......(((((((((((((((...............)))))))))))))))..........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc
         .((({{(((---(...([[(((((((({((------(.........)))}))))))))]])......-..))))}}))).
 target  GGGGACUCU---GAUGUGAAGGGGGGACUC------UGAUGUGAAGAGGAUCCCCCUUGAAGUCCAU-GCCAGACCCUUG
                         ****                                     ****                   

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = KN908874.1:subseq_9827,69188_ Strand = - Positions = 49284 - 49199
 Found by:  Infernal (score=11.43)
 Stem2 length = 12   Apical loop length = 28   Insertion in stem2 = 0, 0
 Free Energy = -22.1

         ..(((((((.......(((((((((((((..................................)))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccgAAAcCcuuuuuggggug---------------ggccaggcCuGAUGuuuuuucaugaccggc
         ...({(((((--((..{[[{((((((((((((............................))))))))))))}]]}----))-)))))})...
 target  UAAUAAGUAG--UUUGUGACGAGCGGCGGGACUCUGGAGCGCGGGGUCUGAGCGCCGUUUGUUCCGCUGCUUUGAU----AA-CUACUCGAGC
                         ****                                                    ****