
genewise output
Score 18.11 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00002880_2.0   84 ASSCFVVPMA                                        
                     ++SCF++PMA                                        
                     STSCFLMPMA                                        
KN908153.1:subs35184 tattttacag                                        
                     cccgtttctc                                        
                     aatctaggga                                        


//
>KN908153.1:subseq(0,50092).pep
STSCFLMPMA
//
>KN908153.1:subseq(0,50092).[35184:35213].sp
TCAACATCTTGCTTTTTAATGCCGATGGCA
//
KN908153.1:subseq(0,50092)	GeneWise	match	35184	35213	18.11	+	.	KN908153.1:subseq(0,50092)-genewise-prediction-1
KN908153.1:subseq(0,50092)	GeneWise	cds	35184	35213	0.00	+	0	KN908153.1:subseq(0,50092)-genewise-prediction-1
//

genewise output
Score 226.81 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00002880_2.0  293 EMFVYLSSELKKLAKELNERLLETPHNPISL                   
                     EMF YLSSELK LA + NERLL+T HN ISL                   
                     EMFTYLSSELKALAAKHNERLLDTAHNTISL                   
KN908153.1:sub-44423 gatatctagtagcggacagctcgagcaaatc                   
                     attcatcgatactccaaaagttaccaactct                   
                     agtctcctaagtcaagctacaacagctcttg                   


SPP00002880_2.0  324                           LSLTSLSEQSGSAVTQLGSMLFT 
                                               +SL +L+++SG+A+TQLGSMLFT 
                               A:A[gct]        MSLKTLNDESGTAITQLGSMLFT 
KN908153.1:sub-44330 GGTAAGTC  Intron 1   CAGCTatcaacaggagagaactgtacta 
                      <1-----[44329:39563]-1>  tctactaaaggcctcatgctttc 
                                               gtggtgttacgaactggatgtca 


SPP00002880_2.0  348 RQVSGA                          VVPLGTSQTINGYVFKG 
                     RQVSGA                          VVP+GT QT+NGY FKG 
                     RQVSGA           R:R[agg]       VVPVGTLQTVNGYAFKG 
KN908153.1:sub-39491 acgtggAGGTAAGGG  Intron 2   CAGGggcggatcagagtgtag 
                     gatcgc  <2-----[39471:35316]-2> ttctgctactagactag 
                     aggtga                          tggtttagcttgcttgt 


SPP00002880_2.0  372 FMSHSNNYPCAYLNAASAIGIKKQDVDMFIKRLDKCLRLCKKEKH     
                     FMSHSNNYPCAYLNAASAIGIKKQDVDMFIKRLDKCLRLC+K+KH     
                     FMSHSNNYPCAYLNAASAIGIKKQDVDMFIKRLDKCLRLCRKDKH     
KN908153.1:sub-35263 tatcaaatctgtcaggtgagaaacgggataaacgatcactaagac     
                     ttcagaaacgcatacccctgtaaaatatttagtaagtgtggaaaa     
                     cggcttctactcgcattccctagattcgccaagcgcgggcgacat     


//
Making a A in phase 1 intron
Making a R in phase 2 intron
>KN908153.1:subseq(0,50092).pep
EMFTYLSSELKALAAKHNERLLDTAHNTISLAMSLKTLNDESGTAITQLGSMLFTRQVSG
ARVVPVGTLQTVNGYAFKGFMSHSNNYPCAYLNAASAIGIKKQDVDMFIKRLDKCLRLCR
KDKH
//
>KN908153.1:subseq(0,50092).[44423:35127].sp
GAAATGTTTACCTATCTCTCCAGTGAATTAAAGGCTCTCGCAGCAAAGCACAATGAACGC
TTACTAGACACAGCGCACAATACCATTTCTCTGGCTATGTCTCTGAAGACTCTGAATGAT
GAAAGCGGGACAGCAATCACTCAGTTGGGATCTATGCTTTTCACAAGACAGGTGTCTGGG
GCAAGGGTTGTGCCGGTTGGTACTTTACAGACCGTTAATGGGTACGCTTTTAAGGGTTTC
ATGTCGCACAGTAATAACTATCCATGCGCTTACCTGAACGCAGCTTCTGCCATCGGCATT
AAAAAGCAAGATGTTGACATGTTCATCAAAAGACTGGACAAGTGCCTGAGGCTGTGCAGG
AAAGACAAACAT
//
KN908153.1:subseq(0,50092)	GeneWise	match	44423	35129	226.81	-	.	KN908153.1:subseq(0,50092)-genewise-prediction-1
KN908153.1:subseq(0,50092)	GeneWise	cds	44423	44330	0.00	-	0	KN908153.1:subseq(0,50092)-genewise-prediction-1
KN908153.1:subseq(0,50092)	GeneWise	intron	44329	39563	0.00	-	.	KN908153.1:subseq(0,50092)-genewise-prediction-1
KN908153.1:subseq(0,50092)	GeneWise	cds	39562	39472	0.00	-	2	KN908153.1:subseq(0,50092)-genewise-prediction-1
KN908153.1:subseq(0,50092)	GeneWise	intron	39471	35316	0.00	-	.	KN908153.1:subseq(0,50092)-genewise-prediction-1
KN908153.1:subseq(0,50092)	GeneWise	cds	35315	35129	0.00	-	1	KN908153.1:subseq(0,50092)-genewise-prediction-1
//
