
genewise output
Score 1736.07 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00002877_2.0    2 NGKLSAEVEPFVPQKKGAEALAIPMALPSDGGSVGGLEPTPIPSYLITC 
                     NGKLSAEVEPF+PQKKG EALAIPM+LP DGGSVGGLEPTPIPSYLITC 
                     NGKLSAEVEPFIPQKKGTEALAIPMSLPGDGGSVGGLEPTPIPSYLITC 
KN906459.1:subs34640 agactggggctaccaagaggcgacatccggggagggcgcacacatcaat 
                     agatccatacttcaaagcactctctctcgagggtggtaccctcgattcg 
                     tagattatgacctggagtactatagtaatttacatatactttacctact 


SPP00002877_2.0   51 YPFVQENQSN                          QFPSYNNDIRWQQ 
                     YPFVQENQSN                          Q+P Y NDIRWQQ 
                     YPFVQENQSN           R:R[cgg]       QIPLYINDIRWQQ 
KN906459.1:subs34787 tctgcgactaCGGTAATTT  Intron 1   TAGGcacttaagaatcc 
                     acttaaaaca  <2-----[34819:38935]-2> atctataatggaa 
                     catgggcggt                          ataattttaagaa 


SPP00002877_2.0   75 SNSSPAGPYLAYPIISTQPPVSQDYMYYQLMPAPCAQVMGFYHPFPTPY 
                     SNS+P GPYLAYPI+  QPPVS +YMYYQLMPAPCAQVMGFYHPFPT Y 
                     SNSNPPGPYLAYPIVPAQPPVSTEYMYYQLMPAPCAQVMGFYHPFPTTY 
KN906459.1:subs38976 tataccgctcgtcagcgcccgtagtattccacgctgcgagttcctcaat 
                     cacaccgcatcacttccacctccaataaattcccgcattgtaactccca 
                     acacttacctatgtattgataaaacgccgagtatttacgactcgttttt 


SPP00002877_2.0  124 TTPLQATNAV---SVDCSERASQQSQINALTSQRNRNT-RAPLIHKPQP 
                     TTPLQATNAV   S+DC++RA+QQ+ IN L++QR+RNT R PLIHK    
                     TTPLQATNAVNTISIDCNDRANQQTPINVLSNQRSRNTTRPPLIHK--V 
KN906459.1:subs39123 aacccgaaggaaatagtagagaccacaagttaccaaaaaacccaca  g 
                     ccctaccactactctagaagcaaacctattcaagggaccgccttaa  t 
                     cactaactactacactctcgacaatcctgaccgacatccaactcca  a 


SPP00002877_2.0  169                           LPQPRCKRPPMKSVAIQKETCAS 
                                               +PQ +CKRPPMKSVA+QKETC+S 
                               A:G[ggt]        VPQIKCKRPPMKSVAVQKETCSS 
KN906459.1:subs39264 GGTTTTAC  Intron 2   TAGGTgccaataaccaaagggcagattt 
                      <1-----[39265:42000]-1>  tcatagagcctagtctaaacgcc 
                                               gagtacggtggatgaaagattag 


SPP00002877_2.0  193 SPETRSKIVLLVDACQQT                          FPNEI 
                      P++RSKIVLLVDACQQT                          FPNEI 
                     GPDSRSKIVLLVDACQQT          D:D[gat]        FPNEI 
KN906459.1:subs42072 gcgactaagctgggtccaGGTGAATT  Intron 3   TAGATtcaga 
                     gcaggcatttttacgaac <1-----[42127:42213]-1>  tcaat 
                     aactgcattcagttcgaa                          tctat 


SPP00002877_2.0  217 ANKTICESVGATPWKSKVRRRRLSHPAAESSSEQGASEADIDSDSGYCS 
                     ANK++ ES+GA  WK+K RRRR SHPAAESSSEQGASEADIDSDSGYCS 
                     ANKSLSESMGAVLWKTKARRRRSSHPAAESSSEQGASEADIDSDSGYCS 
KN906459.1:subs42231 gaatctgaagggctaaagacccttccgggttagcggagggagagagtta 
                     caactcagtgcttgacacggggccacccaccgaagcgacatagaggagg 
                     ccaactatgtaaagaaaaacggctttaagactgatataatcctccacct 


SPP00002877_2.0  266 PKHCQAAAMCTRHADCGAVSISDPAVPAA                     
                     PKHCQAAA+C+RHADC A ++S      A                     
                     PKHCQAAAVCSRHADCTASTVSVCKKNLA                     
KN906459.1:subs42378 cactcggggttacggtagtagagtaaacg                     
                     caagaccctgcgacagcccctgtgaaatc                     
                     aaccgatggttatacttcatctataataa                     


SPP00002877_2.0  295                           GGSWASVASQATQKRPWNEKGQT 
                                               GGSWASVASQATQK+PWNEK Q  
                               -:S[tct]        GGSWASVASQATQKKPWNEKSQV 
KN906459.1:subs42465 TGTTACTT  Intron 4   CAGCTggatgaggtcgacaactagaacg 
                      <1-----[42466:43888]-1>  ggggcgtccaccaaacgaaagat 
                                               aatgctgccattgggtgtaatgt 


SPP00002877_2.0  318 FSRGGRQTEIRNNAQ                       LGYRLRGQSTS 
                     F RGGRQ E+RNNAQ                       LGYR+RGQSTS 
                     FCRGGRQAELRNNAQ                       LGYRMRGQSTS 
KN906459.1:subs43960 ttaggacggccaagcGTAATGA  Intron 5   CAGcgtcaagcaat 
                     tgggggacatgaaca<0-----[44005:44138]-0>tgagtggagcc 
                     ctacaaggatattag                       tgttgaagcaa 


SPP00002877_2.0  344 SERRHNLQRKQDNKTGTPASSNKSGQSPDHLYFE                
                     SERR ++QRKQ++K+GT A  N+  QSP+ L+FE                
                     SERRQSIQRKQESKSGTTAQLNRPDQSPEQLHFE                
KN906459.1:subs44172 tgaacaacaacgaatgaagctaccgcacgctctg                
                     caggagtagaaagacgcccatagcaagcaatata                
                     aaaaattaggaataggcaagacaacgttaggctg                


SPP00002877_2.0  378                        --VNYPFRITLSLTPTNKMLNGLPEN 
                                                +P+ I ++      +L+ LPEN 
                                            RCALFPISIYINCANFCFQLDNLPEN 
KN906459.1:subs44274 GTATTGC  Intron 6   TAGctgctcatataatgatttctgatcga 
                     <0-----[44274:46848]-0>ggcttctctatagcatgtataatcaa 
                                            ctatctactttctactttggctagat 


SPP00002877_2.0  402 SPINIVQTPIPITTSVPKRAKSQKKKALAAALATAQEYSEISMEQKKLQ 
                     SPINIVQTPIPITTSVPKRAKSQKKKALAAALATAQEYSEISMEQKK+Q 
                     SPINIVQTPIPITTSVPKRAKSQKKKALAAALATAQEYSEISMEQKKIQ 
KN906459.1:subs46927 tcaaagcacacaaatgcacgaacaaagcgggcgagcgttgaaagcaaac 
                     cctattacctctccctcagcagaaaactccctcccaaacatgtaaaata 
                     tatcttgcgctcaataagatgtgggaatttagctcgacggtcgggaacg 


SPP00002877_2.0  451                        EALSKASGKKSKTPVQLDLGDMLAEL 
                                            EALSKASGKKSKTPVQLDLGDMLAEL 
                                            EALSKASGKKSKTPVQLDLGDMLAEL 
KN906459.1:subs47074 GTCAGTT  Intron 7   TAGggctagtgaaaaacgccgcggatggt 
                     <0-----[47074:47451]-0>actcaccgaagacctatatgattcat 
                                            atggaataggcgtaagactacggaaa 


SPP00002877_2.0  477 ERQQQAMKARQITNTRPLSYT                          GS 
                     ERQQQAMKARQITNTRPLSYT                          GS 
                     ERQQQAMKARQITNTRPLSYT          V:V[gtt]        GS 
KN906459.1:subs47530 gacccgaagccaaaaactttaGGTATGTA  Intron 8   CAGTTga 
                     agaaactacgatcacgctcac <1-----[47594:49441]-1>  gg 
                     gggaaaggttgaaccatacct                          ct 


SPP00002877_2.0  501 AVPFHIKEHTNRNVFTKAQAVMGSPNPLDSTAPRVKRGKEKEVPKLKRP 
                     AVPFH KEHTNRNVFTKAQ  MGSPNPLDSTAPR+KRGKEKEVPKLKRP 
                     AVPFHTKEHTNRNVFTKAQPFMGSPNPLDSTAPRIKRGKEKEVPKLKRP 
KN906459.1:subs49450 ggctcaagcaaaagtaagcctagtcactgtagcaaaagagaggcatacc 
                     ctctacaaacagattcacacttgccactaccccgtaggaaaatcatagc 
                     tcatccaatacgtgtagagttgttattgccttagcaaaaaaataaaata 


SPP00002877_2.0  550 TALKK--                       IILKEREEKKGRLPVDPSV 
                     TALKK                         IILKEREEKKGRL VD SV 
                     TALKKAS                       IILKEREEKKGRLTVDQSV 
KN906459.1:subs49597 agcaagaGTGTTTT  Intron 9   TAGaatagaggaagctaggcag 
                     cctaacg<0-----[49618:49957]-0>tttaagaaaaggtctaagt 
                     agtagat                       tcgaaaaagaatatgtatt 


SPP00002877_2.0  574 LGSEEQKD-ALSFADDQSEELASQE                         
                     L S+EQKD  LSF DDQSEELASQE                         
                     LSSDEQKDISLSFTDDQSEELASQE          E:D[gat]       
KN906459.1:subs50015 tatggcagattataggctggtgtcgGGTAATTC  Intron 10      
                     tgcaaaaatctgtcaaacaatccaa <1-----[50091:50631]    
                     gtataagtttacttttgagggataa                         


SPP00002877_2.0  598      AGLSAPSDTSLSPASQNSPYCMTPVSQGSPASSGIGSPMATSTL 
                          AGLSAPSDTSLSPASQNSPYCMTPVSQGSPASSGIGSPMA+S + 
                          AGLSAPSDTSLSPASQNSPYCMTPVSQGSPASSGIGSPMASSAI 
KN906459.1:subs50629 CAGATggcagcagatctcgacatcttaacgtcgtcgatgagacagttga 
                     -1>  cgtgccgacctcccgaaccagtcctcagcccgcgtggctcccct 
                          atctaattctgcaatgcccctgttaagctaattgttccgtcacc 


SPP00002877_2.0  643 TKIHSKRFR                          YCNQVLSKEIDECV 
                     TKIHSKRFR                          YCNQVLSKEIDECV 
                     TKIHSKRFR           E:E[gag]       YCNQVLSKEIDECV 
KN906459.1:subs50766 aaacaaataGAGTAAGTG  Intron 11  TAGGttacgcaagaggtg 
                     catagagtg  <2-----[50795:55071]-2> agaattgaataagt 
                     cacccggta                          tctaaatggttata 


SPP00002877_2.0  667 TVLLQELVSFQERVYQKDPVKAKSKRRLVMGLREVTKHMKLNKIKCVII 
                     TVLLQELVSFQERVYQKDP+KAKSKRRLVMGLREVTKHMKL+KIKCVII 
                     TVLLQELVSFQERVYQKDPMKAKSKRRLVMGLREVTKHMKLSKIKCVII 
KN906459.1:subs55115 agtccgcgatcgagtcagcaagataaatgagtcggaacaataaaatgaa 
                     ctttaattgtaagtaaaactacacaggtttgtgatcaatatgatagttt 
                     tgggaagcctagaacgacagacggaaaatgtaaaacgcggacgcgtttt 


SPP00002877_2.0  716 SPNCEKIQSK                          GLDEALYNVIAMA 
                     SPNCEKIQSK                          GLDEALYNVIAMA 
                     SPNCEKIQSK          G:G[ggt]        GLDEALYNVIAMA 
KN906459.1:subs55262 tcatgaactaGGTTTGTT  Intron 12  CAGGTgtgggctagagag 
                     ccagaataca <1-----[55293:58327]-1>  gtaactaattctc 
                     aactaataaa                          agtacctctttgc 


SPP00002877_2.0  740 REQEIPFVFALGRKALGRCVNKLVPVSVVGIFSYSGAE            
                     REQEIPFVFALGRKALGRCVNKLVPVSVVGIFSY GAE            
                     REQEIPFVFALGRKALGRCVNKLVPVSVVGIFSYCGAE            
KN906459.1:subs58369 agcgactgtgcgaagcgctgaatgcgagggatattggg            
                     gaaatctttctggactgggtaattctgttgttgaggca            
                     agaattttttgaggagtctataaatctttctccctgag            


SPP00002877_2.0  778                        SLFHNLVSLTEEARKAYKDMVSSMEQ 
                                            +LF+NLVSLTEEARKAYKDMVSSMEQ 
                                            NLFNNLVSLTEEARKAYKDMVSSMEQ 
KN906459.1:subs58483 GTAAGAT  Intron 13  TAGattaacgtcagggaagtagagttagc 
                     <0-----[58483:59895]-0>attaattctcaacgacaaattcctaa 
                                            cacttggaggagcaggcatggcaggg 


SPP00002877_2.0  804 EQAEEALKNIKKVPH-MGHSRNPSAASAISFCSVISEPISEVNEKDY   
                     EQAEEALKN+KKVPH MGHSRNPSAASAISFCSVISEPISEVNEKDY   
                     EQAEEALKNVKKVPHHMGHSRNPSAASAISFCSVISEPISEVNEKDY   
KN906459.1:subs59974 gcggggtaagaagcccagctcactggagatttagatgcatggagagt   
                     aacaactaataatcaatgacgaccccgctctggttcactcataaaaa   
                     agtggtagctaattccgtttcccttctataccccctggaaactagtt   


SPP00002877_2.0  850                           TNWRNMVETSDGLETSENEECSV 
                                               TNWRNMVETSDGLE SENE+CSV 
                               E:E[gaa]        TNWRNMVETSDGLEASENEDCSV 
KN906459.1:subs60115 GGTATGAT  Intron 14  CAGAAaataaaggatggcggtgaggttg 
                      <1-----[60116:62841]-1>  caggattaccagtaccaaaagct 
                                               atgatgaaattataaaatacttg 


SPP00002877_2.0  874 TTTGSEQAASAPLVRNNTQKQEPK-----TASSTTSSATLEKPTPADKE 
                      T  SE   +   V+++++   PK     T    TS     K TP +K+ 
                     RTMDSEHTIN---VQSDSKASIPKPTPLNTPGVATSGIKPGKLTPVEKD 
KN906459.1:subs62913 aaagtgcaaa   gctgaagaacacaccaacgggatgaacgatacggag 
                     gctacaacta   tacagacgtcaccctaccgtcccgtacgatcctaaa 
                     gcgtaacctt   catttaccataaaagctctttcactatcggaagaat 


SPP00002877_2.0  918 EVKQDDNLEWASQQSTETGSWDGSGRDVLNSSMTSTASTLVPEMLEEDD 
                     EVK DDNLEWASQQSTETGSWDGSGRDVLNSSMTST STLVPEMLEEDD 
                     EVKPDDNLEWASQQSTETGSWDGSGRDVLNSSMTSTTSTLVPEMLEEDD 
KN906459.1:subs63051 ggacggacgtgtccaagagttggagaggcattaaaaaaacgcgacgggg 
                     atacaaatagccaagcacgcgaggggattacctcgccgcttcattaaaa 
                     ggaatctgagatagttataagtaccatcccccgatatctgaaagggatt 


SPP00002877_2.0  967 DEEEDDDEYPQEPISVSRIESWVSETQRTMESLQLVNSNSPEEDNIEHS 
                     DEEE+DDEY QEPISVSRIESWVSETQRTME+LQLVNS  PEEDNIEHS 
                     DEEEEDDEYQQEPISVSRIESWVSETQRTMETLQLVNS--PEEDNIEHS 
KN906459.1:subs63198 ggggggggtccgcatgaaagttgtgacaaagacccgaa  cgggaagca 
                     aaaaaaaaaaaactctggtacgtcacagctactattag  caaaataag 
                     tgaaactgtgaataaacaagcgttgtggtggatgtatt  tagttagtc 


SPP00002877_2.0 1016 EEDEVGQCEQSEAAD----CKERTAEMHVRNGSHTQT             
                     E+D+    E SE  D    CKERT E   RNGS  Q+             
                     EDDD--DVEPSEHVDPVVECKERTVEKLPRNGSQPQS             
KN906459.1:subs63339 gggg  gggctgcggcgggtagcaggaccaagtccca             
                     aaaa  ataccaatacttagaagctaatcgagcacag             
                     attt  tggctatatattacgagtgagttgtaagaac             


//
Making a R in phase 2 intron
Making a G in phase 1 intron
Making a D in phase 1 intron
Making a S in phase 1 intron
Making a V in phase 1 intron
Making a D in phase 1 intron
Making a E in phase 2 intron
Making a G in phase 1 intron
Making a E in phase 1 intron
>KN906459.1:subseq(533042,100089).pep
NGKLSAEVEPFIPQKKGTEALAIPMSLPGDGGSVGGLEPTPIPSYLITCYPFVQENQSNR
QIPLYINDIRWQQSNSNPPGPYLAYPIVPAQPPVSTEYMYYQLMPAPCAQVMGFYHPFPT
TYTTPLQATNAVNTISIDCNDRANQQTPINVLSNQRSRNTTRPPLIHKVGVPQIKCKRPP
MKSVAVQKETCSSGPDSRSKIVLLVDACQQTDFPNEIANKSLSESMGAVLWKTKARRRRS
SHPAAESSSEQGASEADIDSDSGYCSPKHCQAAAVCSRHADCTASTVSVCKKNLASGGSW
ASVASQATQKKPWNEKSQVFCRGGRQAELRNNAQLGYRMRGQSTSSERRQSIQRKQESKS
GTTAQLNRPDQSPEQLHFERCALFPISIYINCANFCFQLDNLPENSPINIVQTPIPITTS
VPKRAKSQKKKALAAALATAQEYSEISMEQKKIQEALSKASGKKSKTPVQLDLGDMLAEL
ERQQQAMKARQITNTRPLSYTVGSAVPFHTKEHTNRNVFTKAQPFMGSPNPLDSTAPRIK
RGKEKEVPKLKRPTALKKASIILKEREEKKGRLTVDQSVLSSDEQKDISLSFTDDQSEEL
ASQEDAGLSAPSDTSLSPASQNSPYCMTPVSQGSPASSGIGSPMASSAITKIHSKRFREY
CNQVLSKEIDECVTVLLQELVSFQERVYQKDPMKAKSKRRLVMGLREVTKHMKLSKIKCV
IISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIFSY
CGAENLFNNLVSLTEEARKAYKDMVSSMEQEQAEEALKNVKKVPHHMGHSRNPSAASAIS
FCSVISEPISEVNEKDYETNWRNMVETSDGLEASENEDCSVRTMDSEHTINVQSDSKASI
PKPTPLNTPGVATSGIKPGKLTPVEKDEVKPDDNLEWASQQSTETGSWDGSGRDVLNSSM
TSTTSTLVPEMLEEDDDEEEEDDEYQQEPISVSRIESWVSETQRTMETLQLVNSPEEDNI
EHSEDDDDVEPSEHVDPVVECKERTVEKLPRNGSQPQS
//
>KN906459.1:subseq(533042,100089).[34640:63443].sp
AATGGAAAGCTATCTGCTGAAGTTGAGCCATTCATCCCTCAGAAGAAAGGGACTGAAGCC
CTTGCAATTCCAATGTCTCTACCAGGTGATGGTGGAAGCGTAGGTGGACTTGAACCCACT
CCTATTCCAAGCTACCTTATAACCTGTTACCCATTTGTGCAGGAGAACCAGTCGAATCGG
CAAATTCCATTATATATTAATGATATAAGATGGCAACAATCAAACTCAAACCCTCCTGGA
CCCTACCTTGCATATCCGATTGTACCTGCTCAGCCACCTGTATCAACAGAATACATGTAC
TACCAGCTAATGCCTGCACCTTGTGCTCAAGTCATGGGATTCTATCACCCGTTTCCTACT
ACTTATACCACACCCCTTCAAGCAACCAATGCAGTCAATACAATCTCAATCGATTGCAAT
GACAGGGCAAACCAACAAACTCCCATCAATGTGTTATCCAACCAGCGAAGCAGAAATACC
ACCAGACCACCCCTTATCCACAAAGTAGGTGTGCCACAGATTAAATGCAAGAGGCCTCCG
ATGAAAAGTGTGGCAGTACAAAAGGAAACTTGTTCATCGGGACCAGACAGTCGGTCCAAA
ATTGTTCTCTTAGTGGATGCTTGCCAGCAAACAGATTTTCCCAATGAAATTGCCAACAAA
TCACTCTCTGAAAGTATGGGTGCAGTACTATGGAAAACAAAAGCAAGACGCCGGCGGTCC
TCTCATCCTGCAGCAGAGTCATCCAGTGAGCAAGGTGCAAGTGAAGCAGATATCGACAGT
GACAGCGGATACTGCAGTCCAAAACACTGCCAGGCAGCTGCGGTGTGTTCTAGACATGCA
GACTGTACTGCCTCAACTGTCAGTGTATGTAAAAAAAATCTAGCATCTGGAGGAAGTTGG
GCCAGTGTGGCCTCCCAAGCTACTCAGAAGAAGCCTTGGAATGAAAAAAGTCAGGTTTTC
TGTAGAGGCGGAAGACAGGCGGAACTTCGAAATAATGCACAGCTTGGGTATCGTATGAGA
GGACAGAGCACATCATCAGAAAGAAGACAAAGTATTCAAAGGAAGCAAGAAAGTAAATCG
GGGACCACAGCACAGTTAAACCGACCAGACCAGAGTCCTGAACAGTTGCACTTTGAGCGC
TGTGCACTTTTCCCTATATCCATTTATATTAACTGTGCAAACTTTTGTTTTCAGTTGGAC
AATTTACCGGAAAATTCTCCAATTAACATTGTTCAGACCCCGATCCCTATCACAACATCT
GTACCAAAGCGAGCTAAGAGTCAGAAGAAGAAAGCACTTGCTGCTGCACTGGCCACTGCC
CAGGAATACTCGGAGATTAGCATGGAGCAGAAAAAAATCCAGGAAGCTCTGTCGAAAGCA
TCTGGAAAGAAGAGCAAGACTCCAGTACAGCTAGACCTTGGAGACATGTTGGCAGAATTA
GAGAGGCAGCAACAAGCAATGAAGGCTCGTCAGATAACAAACACCAGACCTTTATCCTAC
ACTGTTGGCAGTGCTGTCCCATTTCACACCAAAGAACATACAAACAGGAATGTGTTTACA
AAGGCACAGCCTTTTATGGGTTCTCCAAATCCTTTGGACTCCACTGCTCCAAGGATCAAA
AGAGGAAAAGAAAAAGAAGTTCCAAAATTAAAACGTCCAACAGCGCTTAAAAAGGCAAGT
ATTATCTTGAAAGAAAGAGAAGAAAAGAAAGGACGTTTAACTGTGGATCAAAGTGTTTTG
AGTTCAGATGAACAAAAGGATATTTCTTTAAGCTTTACTGATGATCAGTCAGAGGAGTTG
GCATCTCAAGAAGATGCAGGTCTCAGTGCACCAAGTGATACCTCTCTGTCCCCAGCAAGT
CAGAACTCCCCCTACTGTATGACTCCTGTATCACAGGGCTCTCCAGCAAGTTCTGGGATT
GGTAGCCCCATGGCTTCCTCAGCCATCACCAAAATCCACAGCAAGAGGTTTAGAGAGTAT
TGCAATCAAGTACTAAGTAAGGAGATTGATGAATGTGTAACTGTGTTGCTGCAAGAACTG
GTCAGCTTTCAAGAGAGAGTATACCAGAAAGACCCAATGAAAGCCAAGTCGAAAAGAAGA
TTAGTTATGGGTTTACGAGAAGTAACCAAGCACATGAAGTTAAGCAAGATCAAGTGTGTT
ATTATTTCACCAAACTGTGAAAAAATTCAATCAAAAGGTGGATTGGATGAAGCCCTCTAT
AACGTTATTGCTATGGCCAGAGAGCAAGAAATTCCTTTTGTTTTTGCTCTGGGAAGGAAG
GCACTGGGTCGCTGTGTAAATAAATTAGTACCTGTCAGTGTTGTTGGCATTTTCAGCTAC
TGTGGGGCAGAGAACTTATTCAATAATCTGGTGTCACTGACGGAAGAGGCCAGAAAGGCG
TACAAAGATATGGTGTCCTCAATGGAGCAGGAACAGGCTGAGGAGGCTTTAAAGAACGTT
AAAAAAGTTCCTCACCACATGGGTCATTCTCGCAACCCCTCTGCTGCCAGTGCAATTTCA
TTCTGCAGCGTCATCTCTGAGCCGATATCAGAAGTCAATGAAAAGGATTATGAAACAAAT
TGGAGAAATATGGTAGAAACATCTGATGGACTTGAAGCATCAGAAAATGAAGACTGTTCT
GTGAGGACCATGGATTCAGAACACACCATTAATGTCCAATCTGATAGTAAAGCCAGCATA
CCTAAACCAACACCACTGAACACTCCCGGTGTTGCTACCTCAGGCATTAAACCTGGCAAG
TTGACACCAGTGGAAAAAGATGAGGTGAAACCAGATGACAATCTGGAATGGGCATCTCAA
CAGAGTACTGAAACTGGATCATGGGATGGAAGCGGCAGAGATGTCCTCAACTCCTCCATG
ACAAGTACAACTAGCACTCTGGTACCAGAAATGCTGGAGGAAGATGATGATGAGGAAGAA
GAAGACGATGAGTATCAGCAAGAACCTATATCAGTAAGCAGAATAGAGTCCTGGGTTTCT
GAGACTCAGAGGACTATGGAGACACTTCAGCTTGTAAATAGTCCTGAAGAGGATAATATA
GAGCATAGCGAAGATGATGATGATGTGGAGCCCTCTGAACATGTAGATCCAGTTGTTGAA
TGCAAGGAACGGACTGTGGAAAAGCTTCCTAGGAATGGATCACAGCCACAAAGC
//
KN906459.1:subseq(533042,100089)	GeneWise	match	34640	63443	1752.04	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	34640	34818	0.00	+	0	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	34819	38935	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	38936	39264	0.00	+	1	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	39265	42000	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	42001	42126	0.00	+	2	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	42127	42213	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	42214	42465	0.00	+	2	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	42466	43888	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	43889	44004	0.00	+	2	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	44005	44138	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	44139	44273	0.00	+	0	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	44274	46848	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	46849	47073	0.00	+	0	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	47074	47451	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	47452	47593	0.00	+	0	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	47594	49441	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	49442	49617	0.00	+	2	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	49618	49957	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	49958	50090	0.00	+	0	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	50091	50631	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	50632	50794	0.00	+	2	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	50795	55071	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	55072	55292	0.00	+	1	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	55293	58327	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	58328	58482	0.00	+	2	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	58483	59895	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	59896	60115	0.00	+	0	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	intron	60116	62841	0.00	+	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	62842	63443	0.00	+	2	KN906459.1:subseq(533042,100089)-genewise-prediction-1
//

genewise output
Score 19.59 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00002877_2.0  371 PDHLYFEVNYPFRITLSLTPTNKML                         
                     P H YF   YP    + L PTN++L                         
                     PSHNYF--SYPEGKKMLLLPTNQVL                         
KN906459.1:sub-49866 ctcatt  ttcggaaatctcaacgc                         
                     ccaaat  cacagaattttccaatt                         
                     aatcct  acaggaaggtaactgat                         


//
>KN906459.1:subseq(533042,100089).pep
PSHNYFSYPEGKKMLLLPTNQVL
//
>KN906459.1:subseq(533042,100089).[49866:49796].sp
CCATCACATAACTACTTTTCATACCCAGAGGGGAAAAAAATGTTGCTTTTACCAACCAAT
CAGGTACTT
//
KN906459.1:subseq(533042,100089)	GeneWise	match	49866	49798	20.59	-	.	KN906459.1:subseq(533042,100089)-genewise-prediction-1
KN906459.1:subseq(533042,100089)	GeneWise	cds	49866	49798	0.00	-	0	KN906459.1:subseq(533042,100089)-genewise-prediction-1
//
