
genewise output
Score 18.08 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000064_2.0  387 CSEIKSSKYGE                                       
                     C+E+KS KY E                                       
                     CTEVKSRKYRE                                       
KN906395.1:subs63819 taggataatag                                       
                     gcatacgaaga                                       
                     tggcaaagcga                                       


//
>KN906395.1:subseq(984684,100137).pep
CTEVKSRKYRE
//
>KN906395.1:subseq(984684,100137).[63819:63851].sp
TGTACGGAGGTCAAATCAAGAAAGTACAGGGAA
//
KN906395.1:subseq(984684,100137)	GeneWise	match	63819	63851	18.08	+	.	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	cds	63819	63851	0.00	+	0	KN906395.1:subseq(984684,100137)-genewise-prediction-1
//

genewise output
Score 601.59 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000064_2.0   32 FSNYRPFEPQALGLSPSWRLTGFSGMKGUGCKVPQEALLKLLAGLTRPD 
                     F  YRPF+P++LGL   +RLT FS MKG GCKVPQE LL+LLAGL     
                     FPGYRPFDPESLGLGAGFRLTSFSDMKGXGCKVPQETLLRLLAGL---- 
KN906395.1:sub-58786 tcgtcctgcgtcgcgggtccatttgaagtgtagccgaccaccggc     
                     tcgagctacactgtgcgtgtcctcataggggatcaacttgttcgt     
                     cgtcgttcggagcggcccgccccgcggcaatacgggggcacggag     


SPP00000064_2.0   81 VRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPAL               
                                       E G PA        P L               
                     ------------------EEGEPADPDDVGN-PRL               
KN906395.1:sub-58651                   ggggcggcgggga cac               
                                       aagaccacaatga cgt               
                                       ggggcgtgtccgt cgg               


SPP00000064_2.0  116                           IGMDSCVIPLRHGGLSLVQTTDF 
                                               IGMDSCVIPLRH GLSLVQTTDF 
                               G:G[ggt]        IGMDSCVIPLRHRGLSLVQTTDF 
KN906395.1:sub-58603 GGTAAGAC  Intron 1   CAGGTagagttgaccacagctcgcaagt 
                      <1-----[58602:52320]-1>  tgtacgttctgaggtcttaccat 
                                               tggcgtaattatgagcgtgctcc 


SPP00000064_2.0  140 FYPLVEDPYMM                       GRIACANVLSDLYAM 
                     FYP VEDPYM+                       GRIACANVLSDLYAM 
                     FYPSVEDPYMQ                       GRIACANVLSDLYAM 
KN906395.1:sub-52248 ttctgggctacGTGACTG  Intron 2   CAGgcagtgagcagctga 
                     tacctaacata<0-----[52215:50066]-0>ggtcgcattgatact 
                     ttagtacccgg                       actccatggtcgttg 


SPP00000064_2.0  166 GITECDNMLMLLSVSQSMSEE                       EREKV 
                     GITECDNMLMLLSVSQ M+EE                       EREKV 
                     GITECDNMLMLLSVSQKMTEE                       EREKV 
KN906395.1:sub-50020 gaagtgaatatcagacaaaggGTAAGTG  Intron 3   TAGgagag 
                     gtcagaatttttgtgaatcaa<0-----[49957:47942]-0>agaat 
                     acggtccgggactctaggagg                       gggac 


SPP00000064_2.0  192 TPLMVKGFRDAAEEGGTAVTGGQTVVNPWIIIGGVATVVCQPNEFI    
                     TPLM+KGF+DAAEEGGT+VTGGQTVVNPWIIIGGVATVVCQ NEFI    
                     TPLMIKGFKDAAEEGGTSVTGGQTVVNPWIIIGGVATVVCQSNEFI    
KN906395.1:sub-47926 accaaagtagggggggatgaggcaggactaaaggggaggtctagta    
                     cctttagtaaccaaggcctcggacttacgtttggtccttgacaatt    
                     atcgtactatgtagatatattcgtgcttgtcttagtagttagtacc    


SPP00000064_2.0  238                           PDSAVVGDVLVLTKPLGTQVAVN 
                                               P +AV GDVLVLTKPLGTQVAVN 
                                M:M[atg]       PHNAVPGDVLVLTKPLGTQVAVN 
KN906395.1:sub-47788 ATGTAAGCT  Intron 4   CAGGccaggcgggcgcaaccgacggga 
                       <2-----[47786:46698]-2> caactcgattttcactgcatcta 
                                               accattgtcctggataaaagtgt 


SPP00000064_2.0  262 AHQWLDN                       PERWNKVKMVVSREEVELA 
                     AHQWLDN                       PERWNK+++VV+REEVELA 
                     AHQWLDN                       PERWNKIRLVVTREEVELA 
KN906395.1:sub-46627 gccttgaGTAAGTT  Intron 5   TAGcgctaaaccggaaggggcg 
                     caagtaa<0-----[46606:46526]-0>caggaatgtttcgaatatc 
                     atgggct                       tgcgtgctaggcaagtgga 


SPP00000064_2.0  288 YQEAMFNMATLNRT                          AGLMHTFNA 
                     YQEAMFNMATLNRT                          A LMHTFNA 
                     YQEAMFNMATLNRT          A:A[gcg]        AALMHTFNA 
KN906395.1:sub-46468 tcggataagacacaGGTATGTA  Intron 6   CAGCGggtacatag 
                     aaacttatcctagc <1-----[46425:46103]-1>  ccttactac 
                     cgacgttgtcgccg                          atggccttc 


SPP00000064_2.0  312 HAATDITGFGILGHSQNLAKQQRNEVSFVIHNLPIIAKMAAVSKASG-R 
                     HAATDITGFGILGH+QNLA+QQ++EVSFVIHNLPIIAKMAA++KA G R 
                     HAATDITGFGILGHAQNLAQQQQSEVSFVIHNLPIIAKMAAITKACGSR 
KN906395.1:sub-46073 cggagaagtgatgcgcacgccccaggatgacatcaagaaggaaagtgac 
                     acccatcgtgttgacaatcaaaagatgtttaatcttcatcctcacgggg 
                     tgcctctatgcgctagcgaagaatgccttcctgctacagtccaactaca 


SPP00000064_2.0  360 FGLLQGTSAETS                          GLLICLPREQA 
                     F LLQGTSAETS                          GLLICLPREQA 
                     FSLLQGTSAETS          G:G[ggt]        GLLICLPREQA 
KN906395.1:sub-45926 tatccgatggatGGTGAGTC  Intron 7   TAGGTgtcatcccgcg 
                     tgttagcccacc <1-----[45889:43639]-1>  gtttgtcgaac 
                     ttataaaaagat                          tgctctcaggt 


SPP00000064_2.0  384 ARFCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEVLPRGA   
                     ARFC+EIKS KYGEGHQAWI+GIVEKGN++ARII+KPR+IEV PRGA   
                     ARFCAEIKSPKYGEGHQAWIIGIVEKGNKSARIIEKPRIIEVTPRGA   
KN906395.1:sub-43603 gcttggaatcatgggccgtaagaggagaatgcaagaccaaggacagg   
                     cgtgcataccaagagaacgttgttaagaaccgttaacgttatccggc   
                     tcctggcacagtagacgagcccagaaacggcattgaaactgccaagc   


//
Making a G in phase 1 intron
Making a M in phase 2 intron
Making a A in phase 1 intron
Making a G in phase 1 intron
>KN906395.1:subseq(984684,100137).pep
FPGYRPFDPESLGLGAGFRLTSFSDMKGXGCKVPQETLLRLLAGLEEGEPADPDDVGNPR
LGIGMDSCVIPLRHRGLSLVQTTDFFYPSVEDPYMQGRIACANVLSDLYAMGITECDNML
MLLSVSQKMTEEEREKVTPLMIKGFKDAAEEGGTSVTGGQTVVNPWIIIGGVATVVCQSN
EFIMPHNAVPGDVLVLTKPLGTQVAVNAHQWLDNPERWNKIRLVVTREEVELAYQEAMFN
MATLNRTAAALMHTFNAHAATDITGFGILGHAQNLAQQQQSEVSFVIHNLPIIAKMAAIT
KACGSRFSLLQGTSAETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNKS
ARIIEKPRIIEVTPRGA
//
>KN906395.1:subseq(984684,100137).[58786:43461].sp
TTCCCGGGTTACCGGCCTTTTGACCCGGAGTCACTGGGCCTGGGGGCCGGCTTCCGGCTC
ACCTCCTTCTCGGACATGAAGGGCTGAGGATGTAAAGTCCCGCAGGAGACGCTGCTCAGA
CTCCTGGCGGGACTGGAGGAGGGGGAGCCCGCGGATCCGGATGACGTCGGGAATCCCAGG
CTGGGTATTGGGATGGACTCGTGTGTAATACCTCTTAGACATAGGGGACTGTCCCTGGTT
CAGACCACTGACTTCTTTTATCCATCGGTTGAAGACCCCTACATGCAGGGACGCATTGCC
TGCGCAAATGTGCTGAGTGACCTGTATGCTATGGGAATCACGGAGTGTGACAACATGTTG
ATGTTACTCAGTGTCAGTCAAAAGATGACAGAGGAGGAGAGGGAGAAAGTCACACCTCTC
ATGATTAAAGGCTTTAAAGATGCGGCTGAAGAGGGAGGTACATCTGTAACTGGTGGCCAG
ACTGTGGTCAATCCTTGGATTATCATTGGTGGAGTGGCTACAGTGGTTTGTCAATCGAAT
GAATTCATCATGCCACACAACGCAGTTCCTGGGGATGTCCTCGTTCTGACGAAACCTCTA
GGAACACAAGTGGCTGTGAATGCACATCAGTGGTTGGACAATCCTGAGCGCTGGAATAAG
ATCCGTCTAGTGGTGACCAGAGAAGAGGTTGAGCTGGCATACCAGGAAGCCATGTTTAAT
ATGGCTACCCTGAACCGCACGGCGGCAGCTTTGATGCACACCTTTAATGCCCATGCGGCC
ACCGATATCACTGGATTTGGGATCTTGGGCCATGCACAGAACCTGGCACAACAGCAACAA
AGTGAGGTCAGCTTTGTTATCCACAATTTGCCCATTATAGCCAAAATGGCTGCCATCACA
AAAGCCTGTGGAAGCCGATTTAGTTTACTTCAAGGAACATCAGCAGAGACATCTGGTGGT
TTGCTCATTTGCCTTCCCCGAGAGCAGGCTGCTCGCTTCTGTGCGGAGATCAAATCCCCA
AAGTATGGAGAGGGACACCAGGCATGGATCATCGGCATAGTGGAAAAAGGAAACAAGTCG
GCCCGAATTATTGAGAAACCACGAATCATTGAGGTCACCCCAAGAGGGGCC
//
KN906395.1:subseq(984684,100137)	GeneWise	match	58786	43463	622.56	-	.	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	cds	58786	58603	0.00	-	0	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	intron	58602	52320	0.00	-	.	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	cds	52319	52216	0.00	-	2	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	intron	52215	50066	0.00	-	.	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	cds	50065	49958	0.00	-	0	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	intron	49957	47942	0.00	-	.	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	cds	47941	47787	0.00	-	0	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	intron	47786	46698	0.00	-	.	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	cds	46697	46607	0.00	-	1	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	intron	46606	46526	0.00	-	.	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	cds	46525	46426	0.00	-	0	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	intron	46425	46103	0.00	-	.	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	cds	46102	45890	0.00	-	2	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	intron	45889	43639	0.00	-	.	KN906395.1:subseq(984684,100137)-genewise-prediction-1
KN906395.1:subseq(984684,100137)	GeneWise	cds	43638	43463	0.00	-	2	KN906395.1:subseq(984684,100137)-genewise-prediction-1
//
