
genewise output
Score 208.94 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00002897_2.0    2 ANVRLIVIGQSSYIHIK                       HFCSLTSYP 
                     A+VRLIVIGQSSY+HI+                        FCS+T YP 
                     ADVRLIVIGQSSYLHIQ                       KFCSITGYP 
KN906045.1:subs47553 gggacagagctttccacGTAACAT  Intron 1   CAGatttaagtc 
                     catgttttgaccatata<0-----[47604:50014]-0>atgctcgac 
                     atcatttttacatttag                       atctaaatt 


SPP00002897_2.0   28 YDMYVDTDREIYCKLGMMKGETSTSS                        
                     +++YVD DRE+Y KLG+ +GETSTS+                        
                     HEIYVDNDREVYSKLGLKRGETSTSA          G:A[gct]      
KN906045.1:subs50042 cgatggagaggtaacgtaaggatatgGGTAATGC  Intron 2      
                     aatataaagatagatgtaggaccccc <1-----[50121:50859]   
                     tgatttttaaatcggaaaggacgtaa                        


SPP00002897_2.0   54      KSTHVKSNIISGSIKSVWRAMTSPAFDFQGDPAQQGGSLVVGP  
                           S HVKSNII+GSIKS+WRAM SPAFDFQGDPAQQGG+L+VGP  
                          GSPHVKSNIITGSIKSIWRAMASPAFDFQGDPAQQGGALIVGP  
KN906045.1:subs50857 TAGCTgaccgataaaagaaaaatagagacgtgtcggcgccgggtaggc  
                     -1>  ggcatacattcggtagtggctcgcctatagaccaaggctttgc  
                          acctggaccctgttatagaagatcatttatcaaagtaagagta  


SPP00002897_2.0   98                           NRVHFLHRDMNRLDQAPIGSLLQ 
                                               NRVHFLHRDMNR D  PI SLLQ 
                               G:G[ggt]        NRVHFLHRDMNRYDHVPISSLLQ 
KN906045.1:subs50991 GGTATGTC  Intron 3   CAGGTaagctcccgaaatgcgcaatccc 
                      <1-----[50992:54458]-1>  agtattagatagaaatctgctta 
                                               cgctcgttcgcaccttttttttg 


SPP00002897_2.0  122 HAGVQGVHFGDRSVIIDV                                
                     +AGVQ + FG++  +++V                                
                     YAGVQTIPFGNQRPLLEV                                
KN906045.1:subs54530 tgggcaactgacccctgg                                
                     acgtactctgaagcttat                                
                     taagaacttttaggtgaa                                


//
Making a A in phase 1 intron
Making a G in phase 1 intron
>KN906045.1:subseq(205627,100092).pep
ADVRLIVIGQSSYLHIQKFCSITGYPHEIYVDNDREVYSKLGLKRGETSTSAAGSPHVKS
NIITGSIKSIWRAMASPAFDFQGDPAQQGGALIVGPGNRVHFLHRDMNRYDHVPISSLLQ
YAGVQTIPFGNQRPLLEV
//
>KN906045.1:subseq(205627,100092).[47553:54583].sp
GCAGATGTCAGACTTATTGTTATTGGTCAATCCTCATATCTTCATATACAGAAATTTTGC
TCTATAACAGGATATCCTCATGAGATATATGTTGATAATGATAGAGAAGTATATAGCAAG
CTGGGATTAAAAAGGGGGGAAACCTCGACTTCAGCAGCTGGAAGCCCCCATGTGAAGTCA
AACATCATCACTGGGAGTATTAAAAGTATATGGAGAGCAATGGCAAGTCCCGCATTTGAT
TTTCAAGGTGACCCAGCACAACAGGGTGGAGCATTGATAGTGGGTCCAGGTAACAGGGTC
CATTTCCTGCATCGTGACATGAACAGATACGACCATGTTCCTATTAGTTCTCTTCTTCAG
TATGCAGGAGTGCAAACAATCCCTTTTGGTAATCAACGGCCGCTTTTGGAAGTA
//
KN906045.1:subseq(205627,100092)	GeneWise	match	47553	54583	208.94	+	.	KN906045.1:subseq(205627,100092)-genewise-prediction-1
KN906045.1:subseq(205627,100092)	GeneWise	cds	47553	47603	0.00	+	0	KN906045.1:subseq(205627,100092)-genewise-prediction-1
KN906045.1:subseq(205627,100092)	GeneWise	intron	47604	50014	0.00	+	.	KN906045.1:subseq(205627,100092)-genewise-prediction-1
KN906045.1:subseq(205627,100092)	GeneWise	cds	50015	50120	0.00	+	0	KN906045.1:subseq(205627,100092)-genewise-prediction-1
KN906045.1:subseq(205627,100092)	GeneWise	intron	50121	50859	0.00	+	.	KN906045.1:subseq(205627,100092)-genewise-prediction-1
KN906045.1:subseq(205627,100092)	GeneWise	cds	50860	50991	0.00	+	2	KN906045.1:subseq(205627,100092)-genewise-prediction-1
KN906045.1:subseq(205627,100092)	GeneWise	intron	50992	54458	0.00	+	.	KN906045.1:subseq(205627,100092)-genewise-prediction-1
KN906045.1:subseq(205627,100092)	GeneWise	cds	54459	54583	0.00	+	2	KN906045.1:subseq(205627,100092)-genewise-prediction-1
//

genewise output
Score 18.62 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00002897_2.0   62 NIISGSIKSVW                                       
                     N I GSIKS W                                       
                     NAIPGSIKSPW                                       
KN906045.1:sub-69195 agacgtaaact                                       
                     actcgctagcg                                       
                     tcatcaagcag                                       


//
>KN906045.1:subseq(205627,100092).pep
NAIPGSIKSPW
//
>KN906045.1:subseq(205627,100092).[69195:69161].sp
AATGCCATACCTGGCTCAATAAAGAGCCCATGG
//
KN906045.1:subseq(205627,100092)	GeneWise	match	69195	69163	18.62	-	.	KN906045.1:subseq(205627,100092)-genewise-prediction-1
KN906045.1:subseq(205627,100092)	GeneWise	cds	69195	69163	0.00	-	0	KN906045.1:subseq(205627,100092)-genewise-prediction-1
//
