
genewise output
Score 17.90 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00002902_2.0   87 CDKTLKAHKDG                                       
                     C+K LK HK G                                       
                     CEKMLKRHKKG                                       
KN905983.1:subs33633 tgaacaacaag                                       
                     gaattagaaag                                       
                     cgaggagtaga                                       


//
>KN905983.1:subseq(0,50074).pep
CEKMLKRHKKG
//
>KN905983.1:subseq(0,50074).[33633:33665].sp
TGCGAGAAAATGCTGAAAAGGCATAAAAAGGGA
//
KN905983.1:subseq(0,50074)	GeneWise	match	33633	33665	17.90	+	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	33633	33665	0.00	+	0	KN905983.1:subseq(0,50074)-genewise-prediction-1
//

genewise output
Score 970.58 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00002902_2.0    1 MPPTGRELLQARVKELIDSNRVMVFSKSFCPYCDQ               
                     MPPTG++ L+ RV+EL+D N VMVFSKS+CPYC Q               
                     MPPTGKDALRTRVQELVDKNPVMVFSKSYCPYCIQ               
KN905983.1:sub-35294 accagaggccacgcgcggaacgagtaaattcttac               
                     tcccgaactgcgtaattaaacttttgagagcagta               
                     ggcccgtgcgcggggtgcgcggggctgcctgcccg               


SPP00002902_2.0   36                        VKELFSSLGAEYQALELDEC       
                                            VKELF+SLG EY ALELDEC       
                                            VKELFTSLGKEYVALELDEC       
KN905983.1:sub-35189 GTGAGGG  Intron 1   AAGgagctatcgagtggcgcggt       
                     <0-----[35189:29707]-0>taattcctgaaatctataag       
                                            aaactcggcaattggggtat       


SPP00002902_2.0   56                           DGTAIQETLHELTGQRTVPNVFV 
                                               DG++IQE LHELTG RTVP+VFV 
                               D:D[gat]        DGSSIQEVLHELTGLRTVPSVFV 
KN905983.1:sub-29646 GGTAAGAT  Intron 2   TAGATggaaacggccgtagcaagcagtg 
                      <1-----[29645:27946]-1>  agggtaattaatcgtgctcgttt 
                                               tccctgacctaatggactcccta 


SPP00002902_2.0   80 NKTHVGGCDKTLK                       AHKDGSLAKLLGD 
                     NKTHVGGCDKTL+                       AH+DG+L KLL   
                     NKTHVGGCDKTLQ                       AHRDGTLQKLLDK 
KN905983.1:sub-27874 aaacgggtgaaccGTAATTT  Intron 3   TAGgcaggaccactga 
                     aacatgggaacta<0-----[27835:27470]-0>cagagctaattaa 
                     taaccaattaatg                       tcatggaggggcg 


SPP00002902_2.0  106 NSVTYDYDLIVIGGGSGGLACSK                       EAA 
                     ++VTYDYDLIVIGGGSGGLACSK                       EA+ 
                     DAVTYDYDLIVIGGGSGGLACSK                       EAS 
KN905983.1:sub-27430 gggatgtgcagagggtggcgttaGTACCAT  Intron 4   TAGggt 
                     actcaaaattttgggcggtcgca<0-----[27361:21713]-0>acc 
                     cccctttcgactaataccgttcg                       act 


SPP00002902_2.0  132 SFGKKVMVLDYVVPTPKGTSW                          LG 
                     S+GKKVMV DYVVPTP GTSW                          LG 
                     SLGKKVMVFDYVVPTPLGTSW          G:G[ggg]        LG 
KN905983.1:sub-21703 tcgaagagtgtggcaccgattGGTAGGTT  Intron 5   CAGGGcg 
                     ctgaattttaattccctgccg <1-----[21639:21150]-1>  tg 
                     tgaggcgcttccacctagaag                          ct 


SPP00002902_2.0  156 GTCVNVGCIPKKLMHQAAILGQSLKDSRNFGWEYEEQ             
                     GTCVNVGCIPKKLMHQAA+LG SLKDSR FGWEY+EQ             
                     GTCVNVGCIPKKLMHQAALLGHSLKDSRKFGWEYDEQ             
KN905983.1:sub-21141 gatgaggtacaacaccggctgctcagtaatgtgtggc             
                     gcgtatggtcaattaaccttgactaacgatggaaaaa             
                     tacgttattcgaagtagtcgttggaccggccggttga             


SPP00002902_2.0  193                           KHNWDTMREAIQNYIGSLNWGYR 
                                               +HNWDTMR+ IQ+YIGSLNWGYR 
                               V:V[gta]        QHNWDTMRQNIQDYIGSLNWGYR 
KN905983.1:sub-21030 GGTAATAA  Intron 6   CAGTAccatgaaccaacgtagttatgta 
                      <1-----[21029:19753]-1>  aaagactgaataaatgctaggag 
                                               gccgtagagttgtctctatgcca 


SPP00002902_2.0  217 VSLRDKQVRYENAYGEFVEPHKIK                       AT 
                     VSLRDK VRYENAY EFVEPHKIK                       AT 
                     VSLRDKNVRYENAYAEFVEPHKIK                       AT 
KN905983.1:sub-19681 gtccgaagctgagtggtggccaaaGTAAACT  Intron 7   TAGga 
                     tctgaaatgaaacacattacaata<0-----[19609:18591]-0>cc 
                     ctggcgttatacacggttaataag                       aa 


SPP00002902_2.0  243 NKRGKESFFTAEKFVVATGERPRYLNIPGDKEYCIT              
                     N++GKESFFTAEKFV+ATGERPRYL +PGDKE+CIT              
                     NRKGKESFFTAEKFVIATGERPRYLGVPGDKEFCIT              
KN905983.1:sub-18584 aaagagattaggatgagaggacatcggcggagttaa              
                     agagaagttccaatttccgagcgatgtcgaaatgtc              
                     cggaagccccaggtaatctagcgcctctataacctc              


SPP00002902_2.0  279                           DDLFSLPYCPGKTLVVGASYVAL 
                                               DDLFSL YCPGKTLVVGASYVAL 
                                S:S[agt]       DDLFSLSYCPGKTLVVGASYVAL 
KN905983.1:sub-18476 AGGTGGGTA  Intron 8   CAGTggcttctttcgaacggggttggt 
                       <2-----[18474:12087]-2> aattctcagcgactttgccatct 
                                               tctctggtccgggggctcccggg 


SPP00002902_2.0  303 ECAGFLAGLGLDATVMVRSILLRGFDQEMANRAGAYMETHGVKFIKQFV 
                     ECAGFLAG+GLD TVMVRSI LRGFDQEMA +AGAYME+HGVKFIK+FV 
                     ECAGFLAGIGLDVTVMVRSIFLRGFDQEMAEKAGAYMESHGVKFIKKFV 
KN905983.1:sub-12016 gtggtcggagtggagagctatccgtgcgaggagggtagtcggataaatg 
                     agcgttcgtgtatctttgctttggtaaatcaacgcatacagtattaatt 
                     atcttgttacgtgacggatatttctcgggagaccccgagtcggccgata 


SPP00002902_2.0  352 PIS                       VELLEEGTPGRLKVTAKATEGDQ 
                     P S                       VE LE G PGRL+V AK+TE DQ 
                     PTS                       VEQLEPGMPGRLRVVAKSTESDQ 
KN905983.1:sub-11869 catGTAAGAA  Intron 9   CAGggccgcgacgacagggatagagc 
                     ccc<0-----[11860:10602]-0>taatacgtcggtgttcaccagaa 
                     att                       gagggcggaggcactagctactg 


SPP00002902_2.0  378 IIEDEYNT                       VLIAVGRDACTRNIGLEK 
                     IIE EYNT                       VL+AVGRD+CTR IGLEK 
                     IIEGEYNT                       VLVAVGRDSCTRKIGLEK 
KN905983.1:sub-10532 aagggtaaGTAAGTG  Intron 10  CAGgcggggagttaaaagtga 
                     ttagaaac<0-----[10508:10426]-0>tttctggacgcgatgtaa 
                     ccagatta                       agtcacaccctaaccgga 


SPP00002902_2.0  404 IGVKVNE                          NGKIPVSDEEQTSVPY 
                     IGV +NE                          NGKIPV+DEEQT+VP  
                     IGVTLNE           R:R[aga]       NGKIPVNDEEQTNVPS 
KN905983.1:sub-10371 aggacagAGGTAAGGC  Intron 11  TAGAagaacgagggcaagct 
                     tgtctaa  <2-----[10348: 9910]-2> agatctaaaaacatcc 
                     cttcata                          tcgtggtcgagccgtt 


SPP00002902_2.0  428 VYAIGDILDGKLELTPVAIQAGRLLARRLYKGSKLK              
                     VYAIGDILDGK ELTPVAI+AGRLLARRLY G+ LK              
                     VYAIGDILDGKWELTPVAIKAGRLLARRLYGGANLK              
KN905983.1:subs-9860 gtgaggacggatgtacggaaggcccgaactgggata              
                     tactgattagagatcctctacggttcggtaggcata              
                     gtctatcgtaggaggagacaagctccgagcacctag              


SPP00002902_2.0  464                        CDYVNVPTTVFTPLEYGCCGYAEEKA 
                                            CDY+NVPTTVFTPLEYGCCGY+EEKA 
                                            CDYINVPTTVFTPLEYGCCGYSEEKA 
KN905983.1:subs-9752 GTGTGAA  Intron 12  CAGtgtaagcaagtactgtgttgttggag 
                     <0-----[9752 : 8774]-0>gaatatcccttcctaaggggacaaac 
                                            tccccaaccgttaggtcccgttaagc 


SPP00002902_2.0  490 IEIYGEENLE---                       VYHTLFWPLEWTV 
                     IE++G+E LE                          VYHTLFWPLEWTV 
                     IEVFGKEALEASL                       VYHTLFWPLEWTV 
KN905983.1:subs-8695 aggtgaggcggatGTTTCCT  Intron 13  TAGgtcatttccgtag 
                     tattgaactacgt<0-----[8656 : 4630]-0>taacttgctagct 
                     tgctagatggatg                       ccctgcgtgaggc 


SPP00002902_2.0  513 PSRDNNTCFAKIICNKQDD                       DRVVGFH 
                     P RDNN CFAKIICNK D                        +RVVGFH 
                     PGRDNNKCFAKIICNKLDY                       ERVVGFH 
KN905983.1:subs-4590 cgcgaaattgaaataacgtGTAAGAA  Intron 14  TAGgcgggtc 
                     cggaaaagtcattgaataa<0-----[4533 : 2749]-0>agttgta 
                     aatttcgttagccctatct                       gctcgct 


SPP00002902_2.0  539 VLGPNAGEITQGFGAAIKCGLTKEKLDETIGIHPTCAE            
                     VLGPNAGEITQG+ AA+KCGLTKEKLDETIGIHPTCAE            
                     VLGPNAGEITQGYAAAMKCGLTKEKLDETIGIHPTCAE            
KN905983.1:subs-2727 gtgcagggaacgtgggaatgcaagacggaagaccatgg            
                     ttgcacgatcagaccctaggtcaaataactgtaccgca            
                     tgtgcccgctgctcaagacgccagggcgtccctaacag            


SPP00002902_2.0  577                        VFTTMDVSKSSGGDITQKGC       
                                            +FTTM+V+KSSGGDI+QKGC       
                                            IFTTMEVTKSSGGDISQKGC       
KN905983.1:subs-2613 GTCAGTA  Intron 15  CAGataaaggaattgggatcagt       
                     <0-----[2613 : 1013]-0>ttcctatcaccggatcaagg       
                                            atcggacaatattcccggtc       


//
Making a D in phase 1 intron
Making a G in phase 1 intron
Making a V in phase 1 intron
Making a S in phase 2 intron
Making a R in phase 2 intron
>KN905983.1:subseq(0,50074).pep
MPPTGKDALRTRVQELVDKNPVMVFSKSYCPYCIQVKELFTSLGKEYVALELDECDDGSS
IQEVLHELTGLRTVPSVFVNKTHVGGCDKTLQAHRDGTLQKLLDKDAVTYDYDLIVIGGG
SGGLACSKEASSLGKKVMVFDYVVPTPLGTSWGLGGTCVNVGCIPKKLMHQAALLGHSLK
DSRKFGWEYDEQVQHNWDTMRQNIQDYIGSLNWGYRVSLRDKNVRYENAYAEFVEPHKIK
ATNRKGKESFFTAEKFVIATGERPRYLGVPGDKEFCITSDDLFSLSYCPGKTLVVGASYV
ALECAGFLAGIGLDVTVMVRSIFLRGFDQEMAEKAGAYMESHGVKFIKKFVPTSVEQLEP
GMPGRLRVVAKSTESDQIIEGEYNTVLVAVGRDSCTRKIGLEKIGVTLNERNGKIPVNDE
EQTNVPSVYAIGDILDGKWELTPVAIKAGRLLARRLYGGANLKCDYINVPTTVFTPLEYG
CCGYSEEKAIEVFGKEALEASLVYHTLFWPLEWTVPGRDNNKCFAKIICNKLDYERVVGF
HVLGPNAGEITQGYAAAMKCGLTKEKLDETIGIHPTCAEIFTTMEVTKSSGGDISQKGC
//
>KN905983.1:subseq(0,50074).[35294:951].sp
ATGCCGCCCACCGGCAAGGATGCGCTCCGGACCCGGGTGCAGGAGCTTGTGGACAAGAAC
CCGGTGATGGTGTTCAGTAAGAGCTACTGTCCGTACTGCATCCAGGTAAAAGAACTCTTT
ACCTCGCTGGGCAAAGAATATGTTGCGCTGGAGCTGGATGAATGTGATGATGGCAGCAGC
ATTCAGGAAGTCCTCCATGAATTAACTGGGCTGAGAACCGTTCCCAGCGTCTTTGTAAAT
AAAACACACGTCGGAGGATGTGATAAAACACTTCAGGCTCACAGAGATGGGACGCTACAG
AAGCTGTTGGACAAGGACGCCGTCACCTATGATTATGACCTGATAGTCATTGGAGGAGGT
TCAGGCGGCCTGGCTTGTTCCAAGGAAGCCTCTTCTCTGGGAAAGAAGGTCATGGTCTTT
GATTACGTCGTACCCACCCCTCTAGGGACATCATGGGGGCTCGGTGGTACATGCGTGAAT
GTTGGATGTATTCCCAAGAAACTAATGCATCAAGCGGCTCTCTTGGGTCATTCGCTGAAA
GACTCCAGGAAGTTCGGCTGGGAGTATGATGAGCAAGTACAGCACAACTGGGATACAATG
CGACAGAATATTCAGGATTACATTGGCTCTTTAAATTGGGGCTACAGAGTCTCTCTGCGG
GACAAGAATGTTCGATATGAAAACGCATACGCGGAGTTTGTTGAACCACATAAAATAAAG
GCAACAAACAGGAAGGGAAAAGAGAGCTTCTTCACCGCAGAGAAGTTTGTAATAGCTACC
GGTGAAAGGCCCAGGTACCTCGGTGTCCCTGGAGATAAAGAATTCTGCATTACCAGTGAT
GACCTTTTCTCTCTGTCGTATTGCCCCGGGAAGACGCTGGTGGTCGGTGCCTCCTACGTG
GCGTTGGAATGTGCCGGTTTTCTGGCTGGTATAGGCTTGGATGTGACAGTCATGGTGCGA
TCTATATTTCTTCGTGGCTTTGACCAGGAGATGGCAGAGAAAGCCGGCGCCTACATGGAA
TCGCATGGCGTGAAGTTCATCAAGAAATTTGTACCAACTTCTGTGGAACAGCTGGAGCCC
GGGATGCCAGGGAGGCTCAGAGTCGTTGCAAAGTCCACTGAAAGCGATCAGATCATCGAA
GGGGAATATAATACAGTACTGGTTGCCGTAGGCAGAGACTCCTGCACTAGAAAAATCGGC
TTGGAGAAAATCGGTGTTACCCTAAATGAAAGAAATGGCAAGATTCCGGTGAATGACGAG
GAACAGACCAACGTGCCTTCTGTGTATGCCATTGGAGATATCCTGGATGGAAAGTGGGAA
TTGACGCCAGTGGCAATCAAAGCAGGGCGCCTTCTCGCCAGGAGACTGTACGGAGGCGCC
AATTTAAAGTGTGACTACATCAACGTACCAACCACCGTGTTTACTCCATTGGAGTATGGC
TGCTGCGGGTATTCTGAAGAAAAGGCCATTGAGGTCTTTGGAAAGGAAGCTCTGGAGGCA
AGTTTGGTCTACCACACTTTGTTCTGGCCTCTGGAATGGACGGTCCCAGGACGTGATAAT
AACAAGTGTTTTGCAAAGATCATCTGCAATAAACTTGACTATGAGCGCGTTGTCGGGTTC
CATGTTTTGGGTCCGAACGCCGGCGAGATCACTCAGGGCTATGCCGCAGCAATGAAATGC
GGGCTCACCAAAGAGAAGCTGGACGAGACTATCGGCATCCATCCAACATGCGCAGAGATA
TTTACCACGATGGAAGTCACAAAATCTTCAGGTGGTGACATCTCCCAGAAGGGTTGC
//
KN905983.1:subseq(0,50074)	GeneWise	match	35294	953	972.58	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	35294	35190	0.00	-	0	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	35189	29707	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	29706	29646	0.00	-	0	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	29645	27946	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	27945	27836	0.00	-	2	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	27835	27470	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	27469	27362	0.00	-	0	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	27361	21713	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	21712	21640	0.00	-	0	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	21639	21150	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	21149	21030	0.00	-	2	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	21029	19753	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	19752	19610	0.00	-	2	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	19609	18591	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	18590	18475	0.00	-	0	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	18474	12087	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	12086	11861	0.00	-	1	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	11860	10602	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	10601	10509	0.00	-	0	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	10508	10426	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	10425	10349	0.00	-	0	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	10348	9910	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	9909	9753	0.00	-	1	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	9752	8774	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	8773	8657	0.00	-	0	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	8656	4630	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	4629	4534	0.00	-	0	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	4533	2749	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	2748	2614	0.00	-	0	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	intron	2613	1013	0.00	-	.	KN905983.1:subseq(0,50074)-genewise-prediction-1
KN905983.1:subseq(0,50074)	GeneWise	cds	1012	953	0.00	-	0	KN905983.1:subseq(0,50074)-genewise-prediction-1
//
