------- SECIS element -- id:1 -- grade:B ---- Chromosome = your_sequence Strand = - Positions = 63013 - 62932 Found by: Covels (score=6.04) Stem2 length = 10 Apical loop length = 18 Insertion in stem2 = 0, 0 Free Energy = -15.4 Free energy of apical portion = -4.2 Type = 2 ..(((((((........((((((((((.(((((......................))))).)))))))))).........)))))))... model uucggucaugcg-UuaAUGAcGgccug-gcccuAAAcC-------cuuuuuggggcgggc-caggcCuGAUGuuu-uuucaugaccg-gc ....((({(........([[((((((({((((------.((.((((....))))))))))})))))))]]).....-.-.)})))..... target UUAAUUACCAAAuUUGAUGAGUUUCAAaGCAG------uugaguaCCAAGGUACCAUUGUaUUGGGAUGAAUGCUc-U-GGUUGAGGaGU **** **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = your_sequence Strand = + Positions = 68639 - 68713 Found by: Covels (score=5.53) Stem2 length = 7 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -4.3 Type = 1 ..(((((((........(((((((((((((((...............))))))))))))))).........))))))).. model uucggucaugcg-UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu-uuuucaugaccggc ....((({(........{[[(..{(({(((((.....--........)))))}))}--)]]}.....-...)}))).... target AUAGGCUAUACCuGGCAUGAAAUCAUAGCAGAAACCC--CUCCUGUGUCUGCAAUA--UGAUACUgA-UCAAAAGUGGAG **** ^^ ****