------- SECIS element -- id:1 -- grade:B ---- Chromosome = your_sequence Strand = + Positions = 32095 - 32174 Found by: Covels (score=8.82) Stem2 length = 11 Apical loop length = 13 Insertion in stem2 = 1, 0 Free Energy = -15.9 Free energy of apical portion = -0.4 Type = 2 ..(((((((........((((((((((.(((((...............)))))))))))))))...........))))))).. model uucggucaugcg-UuaAUGAcGgccug-gcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc ..((({(((........{[[{(((({(.((((((....((....)).)))))))}))))}]]}.......-...)))})--)) target GAAGCCAGGCUUcCCGAUGAGCGGACCaUGGCCCAACGGCUGAGGCGGGGCCAGCUCUGGGAUGCUgcCa-GAAUUUUG--UU **** ^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = your_sequence Strand = + Positions = 30814 - 30885 Found by: Covels (score=9.29) Stem2 length = 7 Apical loop length = 15 Insertion in stem2 = 0, 1 Free Energy = -5.6 Free energy of apical portion = -3.1 Type = 2 ..(((((((........(((((((((((((((...............)))))))))))))))..........))))))).. model uucggucaugcg-UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc ..({((...........{[[((----((((((...(((......)))))))))---.))]]}....-.-......))}).. target GUGAGUCAAGGUgCUGAUGAUG----ACCUAUAAAGCCCUAAAUGGCAUGGGU---CCGGAUUAUc-u-CAGGGAGCACCU **** ^^^ ****