TBLASTN 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= SPP00001063_2.0 # Protein # Thioredoxin reductase 3 (TR3) # Chicken (Gallus gallus) (606 letters) Database: genome.fa 47,351 sequences; 2,188,353,730 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value KN347796.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 206 2e-54 KN346354.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 149 2e-35 KN333725.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 89 2e-16 KN336791.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 55 6e-06 KN323524.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 52 5e-05 KN329011.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 40 0.45 KN335453.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 39 0.70 KN329897.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 37 4.1 KN341446.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 36 4.4 >KN347796.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold26330, whole genome shotgun sequence Length = 165110 Score = 206 bits (524), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 106/156 (67%), Positives = 110/156 (70%), Gaps = 41/156 (26%) Frame = +3 Query: 248 KATNRKGQVTYHTAETFVLATGERPRYLGIPGDKEYCIT--------------------- 286 +ATNRKGQ TYHTAE FVLATGERPRYLGIPGDKEYCIT Sbjct: 82794 QATNRKGQETYHTAERFVLATGERPRYLGIPGDKEYCITR*DEKILTEIVFCCCKCIQKN 82973 Query: 287 --------------------SDDLFSLPYCPGKTLVVGASYVALECAGFLAGLGLDVTVM 326 SDDLFSLPYCPGKTLVVGASYVALECAGFLAG+GLDV+VM Sbjct: 82974 *VKLNCITTFQCVQPYSFLFSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVSVM 83153 Query: 327 VRSILLRGFDQEMAEKIGAHMETHGVTFIRKFVPTQ 362 VRSILLRGFDQEMAE+ GAHMETHGV FIRKFVP Q Sbjct: 83154 VRSILLRGFDQEMAERAGAHMETHGVKFIRKFVPIQ 83261 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 46/55 (83%), Positives = 52/55 (94%) Frame = +3 Query: 418 EKNGKVPVNDEERTNVPYVYAIGDILDGKLELTPVAIQAGKLLARRLYGGSSTKC 472 ++NGK+PV+DEE+TNVPYVYAIGDILDGKLELTPVAIQAG+LLARRLY GSS K Sbjct: 85791 KRNGKIPVSDEEQTNVPYVYAIGDILDGKLELTPVAIQAGRLLARRLYAGSSIKV 85955 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 40/59 (67%), Positives = 48/59 (81%) Frame = +3 Query: 191 RAYGWQYDEQVKHNWEIMVEAVQNYIGSLNWGYRLSLREKSVTYQNSYGEFVEPHKIKA 249 + Y + VKHNWE MVEA+QNYIGSLNWGYR+SLREK+VTY N+Y EF+EPHK+K Sbjct: 79491 KLYSFLVSVSVKHNWETMVEAIQNYIGSLNWGYRVSLREKTVTYLNAYAEFIEPHKVKV 79667 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 41/46 (89%), Positives = 45/46 (97%) Frame = +3 Query: 540 NRVVGFHVLGPNAGEVTQGFAAAIKCGLTKELLDETIGIHPTCAEV 585 NRV+GFHVLGP+AGE+TQGFAAAIKCGLTKELL+ETIGIHPT AEV Sbjct: 88941 NRVIGFHVLGPSAGEITQGFAAAIKCGLTKELLNETIGIHPTSAEV 89078 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 38/40 (95%), Positives = 39/40 (97%) Frame = +1 Query: 161 GLGGTCVNVGCIPKKLMHQAALLGQALKDSRAYGWQYDEQ 200 GLGGTCVNVGCIPKKLMHQAALLGQALKDSR +GWQYDEQ Sbjct: 77545 GLGGTCVNVGCIPKKLMHQAALLGQALKDSRKFGWQYDEQ 77664 Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 34/44 (77%), Positives = 42/44 (95%) Frame = +3 Query: 1 MPPPGQTQLPDWDGLKLRVRTLIATHRVMIFSKSYCPYCHRVKE 44 MPPPGQT+LPDWDGLKLRVR+L+ +HRV++FSKSYCPYC RV++ Sbjct: 57360 MPPPGQTRLPDWDGLKLRVRSLVGSHRVLVFSKSYCPYCLRVRQ 57491 Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 33/41 (80%), Positives = 38/41 (92%) Frame = +1 Query: 468 SSTKCDYINVPTTVFTPLEYGSCGLAEEKAIEEYGKQNLEV 508 SS +CDY+NVPTTVFTPLEYGSCGL EEKA++EYG+ NLEV Sbjct: 86206 SSFQCDYVNVPTTVFTPLEYGSCGLPEEKAVKEYGEHNLEV 86328 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 31/46 (67%), Positives = 38/46 (82%) Frame = +2 Query: 53 YYALELDVTDDGPSIQQVLAELTNQRTVPNVFINGKHIGGCDATYK 98 +Y L +DDGPSIQ+VL E+TNQRTVPNVF+NG H+GGCDAT + Sbjct: 71741 FYVLS---SDDGPSIQEVLVEMTNQRTVPNVFVNGTHVGGCDATLQ 71869 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 29/34 (85%), Positives = 30/34 (88%) Frame = +1 Query: 508 VYHSLFWPLEWTVPGRDNNTCYAKIICNKLDGNR 541 VYH+LFWPLEWTVP RDNNTCYAKIICNKL R Sbjct: 87616 VYHTLFWPLEWTVPNRDNNTCYAKIICNKLANVR 87717 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 28/39 (71%), Positives = 34/39 (87%) Frame = +1 Query: 98 KAYENGTLQRILGDVKDAETYDYDLIVIGGGSGGLACSK 136 +AY+NG+LQ++LG D + YDYDLIVIGGGSGGLACSK Sbjct: 74857 QAYQNGSLQKLLGSGTDVKPYDYDLIVIGGGSGGLACSK 74973 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/42 (69%), Positives = 33/42 (78%), Gaps = 1/42 (2%) Frame = +1 Query: 136 KEAATLGKKVMVLDYVVPTPLGTSWGLGG-TCVNVGCIPKKL 176 +EAATLGKKVMVLDYVVPTPLGTSWG C+ + C+ K L Sbjct: 76309 QEAATLGKKVMVLDYVVPTPLGTSWGKAQIICLELECM*KDL 76434 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 25/33 (75%), Positives = 29/33 (87%) Frame = +3 Query: 362 QVERLEDGTPGRLKVTAKSTEGPEFFEGEYNTV 394 Q+ERLE+G PGRLKV A+STEG + FEGEYNTV Sbjct: 83526 QIERLEEGMPGRLKVVARSTEGSDTFEGEYNTV 83624 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/26 (88%), Positives = 24/26 (92%) Frame = +3 Query: 394 VLIAIGRDACTRNIGLQTIGVKINEK 419 VLIAIGRDACTRNIGL IGV+INEK Sbjct: 84129 VLIAIGRDACTRNIGLDKIGVRINEK 84206 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 18/23 (78%), Positives = 21/23 (91%) Frame = +1 Query: 584 EVFTTMDITKSSGQDITQRGCUG 606 +VFTTM+ITKSSGQ+ITQ GC G Sbjct: 89383 QVFTTMNITKSSGQEITQAGC*G 89451 >KN346354.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold24631, whole genome shotgun sequence Length = 77135 Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 71/96 (73%), Positives = 80/96 (83%) Frame = -3 Query: 275 LGIPGDKEYCITSDDLFSLPYCPGKTLVVGASYVALECAGFLAGLGLDVTVMVRSILLRG 334 L +P + + SDDLFSLP+CPGKTLVVGASYVALECAGFLAG+GLDVTVMVRSILLRG Sbjct: 30417 LVVPNLFYFILFSDDLFSLPHCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG 30238 Query: 335 FDQEMAEKIGAHMETHGVTFIRKFVPTQVERLEDGT 370 FDQEMA KIG HME HG+ FI++FVPT+V L T Sbjct: 30237 FDQEMANKIGEHMEEHGIKFIKQFVPTKVSLLTRNT 30130 Score = 86.3 bits (212), Expect(2) = 1e-27, Method: Compositional matrix adjust. Identities = 37/51 (72%), Positives = 43/51 (84%) Frame = -3 Query: 201 VKHNWEIMVEAVQNYIGSLNWGYRLSLREKSVTYQNSYGEFVEPHKIKATN 251 VKH+WE M EAVQNYIGSLNWGYR++LR+ VTY+N+YGEFV PH IK N Sbjct: 32682 VKHSWETMTEAVQNYIGSLNWGYRVALRDNKVTYENAYGEFVGPHTIKVLN 32530 Score = 62.4 bits (150), Expect(2) = 1e-27, Method: Compositional matrix adjust. Identities = 27/38 (71%), Positives = 32/38 (84%) Frame = -1 Query: 249 ATNRKGQVTYHTAETFVLATGERPRYLGIPGDKEYCIT 286 ATN KG+ +TAE F++ATGERPRYL IPGDKEYCI+ Sbjct: 32417 ATNTKGKEKLYTAEKFIIATGERPRYLNIPGDKEYCIS 32304 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/124 (45%), Positives = 65/124 (52%), Gaps = 43/124 (34%) Frame = -2 Query: 136 KEAATLGKKVMVLDYVVPTPLGTSWG---------------------------------- 161 +EA KKVMVLDYV PTPLGTSWG Sbjct: 34246 QEAVKYDKKVMVLDYVTPTPLGTSWGNFLLITDIL*RGISYYMALQFYFGIVFINT*YVL 34067 Query: 162 ---------LGGTCVNVGCIPKKLMHQAALLGQALKDSRAYGWQYDEQVKHNWEIMVEAV 212 LGGTCVNVGCIPKKLMHQAALLGQALKDSR +GWQ+ E+ E+ + AV Sbjct: 34066 CLLSLLPQGLGGTCVNVGCIPKKLMHQAALLGQALKDSRKFGWQFTEE---GMELKIMAV 33896 Query: 213 QNYI 216 ++ Sbjct: 33895 LIFV 33884 Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 41/46 (89%), Positives = 42/46 (91%) Frame = -3 Query: 540 NRVVGFHVLGPNAGEVTQGFAAAIKCGLTKELLDETIGIHPTCAEV 585 RV+GFHVLGPNAGEVTQGFAAAIKCGLTKE LD TIGIHP CAEV Sbjct: 10986 KRVIGFHVLGPNAGEVTQGFAAAIKCGLTKEQLDSTIGIHPVCAEV 10849 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 37/54 (68%), Positives = 48/54 (88%) Frame = -1 Query: 419 KNGKVPVNDEERTNVPYVYAIGDILDGKLELTPVAIQAGKLLARRLYGGSSTKC 472 ++GK+P NDEE+TNVPY+YAIGD+L+ KLELTPVAIQAG+LL +RLY G++ K Sbjct: 16538 RSGKIPANDEEQTNVPYIYAIGDVLEDKLELTPVAIQAGRLLTQRLYAGATLKV 16377 Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 27/39 (69%), Positives = 37/39 (94%) Frame = -3 Query: 470 TKCDYINVPTTVFTPLEYGSCGLAEEKAIEEYGKQNLEV 508 T+CDY+NVPTTVFTP+EYG+CG +EEKA+E++G+ N+EV Sbjct: 14220 TQCDYVNVPTTVFTPMEYGACGFSEEKAMEKFGENNIEV 14104 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 28/38 (73%), Positives = 29/38 (76%) Frame = -1 Query: 507 EVYHSLFWPLEWTVPGRDNNTCYAKIICNKLDGNRVVG 544 +VYHS FWPLEWTVPGRDNN CYAKIICN D V Sbjct: 12677 QVYHSFFWPLEWTVPGRDNNKCYAKIICNIQDNVSVFS 12564 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/35 (65%), Positives = 29/35 (82%) Frame = -2 Query: 363 VERLEDGTPGRLKVTAKSTEGPEFFEGEYNTVLIA 397 VE++E+GTPG+LKV AKST G + EGEYNTV I+ Sbjct: 22105 VEQIEEGTPGKLKVIAKSTTGSQTIEGEYNTVSIS 22001 Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust. Identities = 18/25 (72%), Positives = 22/25 (88%) Frame = -1 Query: 394 VLIAIGRDACTRNIGLQTIGVKINE 418 VL+A+GRDACTR IGL +GVKIN+ Sbjct: 18686 VLLAVGRDACTRKIGLDKVGVKINK 18612 >KN333725.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold10983, whole genome shotgun sequence Length = 157996 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 39/50 (78%), Positives = 43/50 (86%) Frame = -3 Query: 156 LGTSWGLGGTCVNVGCIPKKLMHQAALLGQALKDSRAYGWQYDEQVKHNW 205 LGTSWGLGGTCVNVGCIPKKLMHQAALLG ALKD+R YGW + + H+W Sbjct: 137237 LGTSWGLGGTCVNVGCIPKKLMHQAALLGSALKDARHYGWNISQPIHHDW 137088 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/36 (72%), Positives = 29/36 (80%) Frame = -2 Query: 308 VALECAGFLAGLGLDVTVMVRSILLRGFDQEMAEKI 343 V+LECAGFL G+GLD TVMVRSI LRGFDQ +I Sbjct: 128178 VSLECAGFLTGIGLDTTVMVRSIPLRGFDQVSVFQI 128071 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 35/52 (67%) Frame = -3 Query: 393 TVLIAIGRDACTRNIGLQTIGVKINEKNGKVPVNDEERTNVPYVYAIGDILD 444 T L GR + + L+T+GVK+N + GK+ V+ E T+VP++YA+GDI + Sbjct: 114644 TSLFP*GRVPDAKTLNLETVGVKMNSETGKIIVDASEATSVPHIYAVGDITE 114489 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/34 (64%), Positives = 26/34 (76%) Frame = -2 Query: 475 INVPTTVFTPLEYGSCGLAEEKAIEEYGKQNLEV 508 + VPTTVFTPLEYG GL+EE+A+ YG N EV Sbjct: 108528 MQVPTTVFTPLEYGCVGLSEEEAVGCYGADNTEV 108427 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 41/63 (65%) Frame = -3 Query: 338 EMAEKIGAHMETHGVTFIRKFVPTQVERLEDGTPGRLKVTAKSTEGPEFFEGEYNTVLIA 397 +M+ + +ME+HG F++K +PT+VE L+ G+L+V+ K+ + + ++TV+ A Sbjct: 125483 QMSSLVADYMESHGTRFLKKCIPTKVEELD---SGKLQVSWKNADMGKEETDSFDTVIWA 125313 Query: 398 IGR 400 +G+ Sbjct: 125312 VGK 125304 Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust. Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = -1 Query: 445 GKLELTPVAIQAGKLLARRLYGGSSTKCDYINV 477 G+ ELTP AI AGKLLARRL+G SS DY +V Sbjct: 108880 GRPELTPTAIAAGKLLARRLFGQSSELMDYDSV 108782 Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust. Identities = 22/43 (51%), Positives = 27/43 (62%) Frame = -3 Query: 564 KCGLTKELLDETIGIHPTCAEVFTTMDITKSSGQDITQRGCUG 606 +CG T + +T+GIHPT AE T + ITK SG D T GC G Sbjct: 102725 RCGATYSQMMKTVGIHPTSAEEVTKLHITKRSGLDATVTGC*G 102597 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 26/38 (68%) Frame = -2 Query: 527 TCYAKIICNKLDGNRVVGFHVLGPNAGEVTQGFAAAIK 564 C+ +++C + R++G H +GPNAGEV QGFA IK Sbjct: 104931 NCF-QMVCLREKEQRLLGLHFIGPNAGEVIQGFALGIK 104821 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 15/27 (55%), Positives = 21/27 (77%) Frame = -2 Query: 204 NWEIMVEAVQNYIGSLNWGYRLSLREK 230 N M +AVQNY+ SLNWG+R+ L++K Sbjct: 136761 NRSTMAQAVQNYVKSLNWGHRVQLQDK 136681 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 16/20 (80%), Positives = 19/20 (95%) Frame = -2 Query: 119 DYDLIVIGGGSGGLACSKEA 138 +YDL+VIGGGSGGLAC+KE Sbjct: 139266 EYDLLVIGGGSGGLACAKEG 139207 >KN336791.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold14241, whole genome shotgun sequence Length = 34245 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 40/67 (59%) Frame = -3 Query: 15 LKLRVRTLIATHRVMIFSKSYCPYCHRVKELFSSLGVQYYALELDVTDDGPSIQQVLAEL 74 L L ++ I+ + V+IFSK+ C YC K+LF + V Y A+ELD+ + Q +L ++ Sbjct: 1084 LFLNIQETISDNCVVIFSKTRCSYCKMAKKLFQDMNVNYTAVELDMQRNESQFQDILQQM 905 Query: 75 TNQRTVP 81 T RTV Sbjct: 904 TGGRTVS 884 >KN323524.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold338, whole genome shotgun sequence Length = 47598 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 26/49 (53%), Positives = 30/49 (61%) Frame = -2 Query: 541 RVVGFHVLGPNAGEVTQGFAAAIKCGLTKELLDETIGIHPTCAEVFTTM 589 +VVG H+ G E+ QGFA AIK G TK D TI IHPT AE T+ Sbjct: 41234 KVVGLHMQGLGCDEMLQGFAVAIKMGATKVDFDNTIAIHPTSAEELVTL 41088 >KN329011.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold6000, whole genome shotgun sequence Length = 217412 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 31/43 (72%) Frame = -1 Query: 392 NTVLIAIGRDACTRNIGLQTIGVKINEKNGKVPVNDEERTNVP 434 + +L+ IGR T+N+GL+ +GV+++ K G++PVN +T +P Sbjct: 169247 DVLLVCIGRRPFTKNLGLEDLGVELDNK-GRIPVNTRFQTKIP 169122 >KN335453.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold12803, whole genome shotgun sequence Length = 97781 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = -1 Query: 508 VYHSL---FWPLEWTVPGRDNNTCYAKIICNKLDGNRVVGFHVLGPNAGEV 555 ++HSL W LE VP R+ +C+ K+ C+ + G H+ G G+V Sbjct: 10466 LFHSLQHFLWGLEAAVPARNKKSCFCKVSCSGSQVRQAAGRHLEGQK*GQV 10314 >KN329897.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold6958, whole genome shotgun sequence Length = 146861 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Frame = -1 Query: 11 DWDGLKLR---VRTLIATHRVMIFSKSYCPYCHRVKELFSSLGVQYYALE-LDVT--DDG 64 D LK+ V++ + ++V +F K CPYC EL + LE +D+T +D Sbjct: 15545 DSSTLKMSQQFVKSKLGANKVAVFIKPTCPYCQEAVELLKKYAFKPGHLEFIDLTARNDM 15366 Query: 65 PSIQQVLAELTNQRTV 80 SIQ + T RTV Sbjct: 15365 SSIQDYFLQSTGARTV 15318 >KN341446.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold19066, whole genome shotgun sequence Length = 206492 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = -2 Query: 75 TNQRTVPNVFINGKHIGGCDATYKAYENGTL 105 +N T+P V++NG+ +GGCD + ++NG L Sbjct: 112309 SNWPTIPQVYLNGEFVGGCDILLQMHQNGDL 112217 Database: genome.fa Posted date: Sep 15, 2015 12:21 AM Number of letters in database: 2,188,353,730 Number of sequences in database: 47,351 Lambda K H 0.319 0.138 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 47351 Number of Hits to DB: 1,777,354,903 Number of extensions: 29829245 Number of successful extensions: 121163 Number of sequences better than 10.0: 9 Number of HSP's gapped: 121148 Number of HSP's successfully gapped: 43 Length of query: 606 Length of database: 729,451,243 Length adjustment: 136 Effective length of query: 470 Effective length of database: 723,011,507 Effective search space: 339815408290 Effective search space used: 339815408290 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 53 (25.0 bits)