TBLASTN 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= SPP00000129_2.0 # Protein # Thioredoxin reductase 1 (TR1) # Human (Homo sapiens) (649 letters) Database: genome.fa 47,351 sequences; 2,188,353,730 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value KN347796.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 190 1e-48 KN346354.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 159 2e-38 KN333725.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 93 2e-17 KN323524.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 52 7e-05 KN328625.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 47 0.002 KN336791.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 42 0.074 KN335453.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 40 0.47 KN348432.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 37 2.8 KN329011.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 37 3.2 KN339168.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 36 4.9 KN337135.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 35 8.8 >KN347796.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold26330, whole genome shotgun sequence Length = 165110 Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 95/156 (60%), Positives = 108/156 (69%), Gaps = 41/156 (26%) Frame = +3 Query: 291 KATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCIS--------------------- 329 +ATN KG+E ++AERF++ATGERPRYLGIPGDKEYCI+ Sbjct: 82794 QATNRKGQETYHTAERFVLATGERPRYLGIPGDKEYCITR*DEKILTEIVFCCCKCIQKN 82973 Query: 330 --------------------SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM 369 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDV+VM Sbjct: 82974 *VKLNCITTFQCVQPYSFLFSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVSVM 83153 Query: 370 VRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIK 405 VRSILLRGFDQ+MA + G HME HG+KFIR+FVPI+ Sbjct: 83154 VRSILLRGFDQEMAERAGAHMETHGVKFIRKFVPIQ 83261 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 43/55 (78%), Positives = 52/55 (94%) Frame = +3 Query: 461 EKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKC 515 ++ GKIPV+DEEQTNVPY+YAIGDIL+ K+ELTPVAIQAGRLLA+RLYAGS++K Sbjct: 85791 KRNGKIPVSDEEQTNVPYVYAIGDILDGKLELTPVAIQAGRLLARRLYAGSSIKV 85955 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 35/57 (61%), Positives = 46/57 (80%) Frame = +3 Query: 236 YGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKA 292 Y + V +VKH+W+ M+EA+QN+IGSLNWGYRV+LREK V Y NAY +FI PH++K Sbjct: 79497 YSFLVSVSVKHNWETMVEAIQNYIGSLNWGYRVSLREKTVTYLNAYAEFIEPHKVKV 79667 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 35/45 (77%), Positives = 41/45 (91%) Frame = +3 Query: 584 RVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEV 628 RV+GFHVLGP+AGE+TQGFAAA+KCGLTK+ L+ TIGIHP AEV Sbjct: 88944 RVIGFHVLGPSAGEITQGFAAAIKCGLTKELLNETIGIHPTSAEV 89078 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 33/39 (84%), Positives = 37/39 (94%) Frame = +1 Query: 204 GLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE 242 GLGGTCVNVGCIPKKLMHQAALLGQAL+DSR +GW+ +E Sbjct: 77545 GLGGTCVNVGCIPKKLMHQAALLGQALKDSRKFGWQYDE 77661 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 30/41 (73%), Positives = 37/41 (90%) Frame = +1 Query: 511 STVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 551 S+ +CDY NVPTTVFTPLEYG+CGL EEKAV+++GE N+EV Sbjct: 86206 SSFQCDYVNVPTTVFTPLEYGSCGLPEEKAVKEYGEHNLEV 86328 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 25/34 (73%), Positives = 28/34 (82%) Frame = +1 Query: 551 VYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNER 584 VYH+ FWPLEWT+P+RDNN CYAKIICN N R Sbjct: 87616 VYHTLFWPLEWTVPNRDNNTCYAKIICNKLANVR 87717 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/26 (73%), Positives = 24/26 (92%) Frame = +3 Query: 437 VMLAIGRDACTRKIGLETVGVKINEK 462 V++AIGRDACTR IGL+ +GV+INEK Sbjct: 84129 VLIAIGRDACTRNIGLDKIGVRINEK 84206 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/34 (55%), Positives = 27/34 (79%) Frame = +3 Query: 404 IKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTV 437 +++E++E G PGRL+VVA+ST + EGEYNTV Sbjct: 83523 LQIERLEEGMPGRLKVVARSTEGSDTFEGEYNTV 83624 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Frame = +1 Query: 188 VMVLDFVTPTPLGTRWGLGG-TCVNVGCIPKKL 219 VMVLD+V PTPLGT WG C+ + C+ K L Sbjct: 76336 VMVLDYVVPTPLGTSWGKAQIICLELECM*KDL 76434 >KN346354.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold24631, whole genome shotgun sequence Length = 77135 Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 76/96 (79%), Positives = 83/96 (86%) Frame = -3 Query: 318 LGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG 377 L +P + + SDDLFSLP+CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG Sbjct: 30417 LVVPNLFYFILFSDDLFSLPHCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG 30238 Query: 378 FDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGT 413 FDQ+MANKIGEHMEEHGIKFI+QFVP KV + T Sbjct: 30237 FDQEMANKIGEHMEEHGIKFIKQFVPTKVSLLTRNT 30130 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 44/54 (81%), Positives = 50/54 (92%) Frame = -1 Query: 462 KTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKC 515 ++GKIP DEEQTNVPYIYAIGD+LEDK+ELTPVAIQAGRLL QRLYAG+T+K Sbjct: 16538 RSGKIPANDEEQTNVPYIYAIGDVLEDKLELTPVAIQAGRLLTQRLYAGATLKV 16377 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 42/64 (65%), Positives = 49/64 (76%) Frame = -3 Query: 240 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKE 299 V TVKH W+ M EAVQN+IGSLNWGYRVALR+ KV YENAYG+F+GPH IK N+ Sbjct: 32694 VFSTVKHSWETMTEAVQNYIGSLNWGYRVALRDNKVTYENAYGEFVGPHTIKVLNSNCLS 32515 Query: 300 KIYS 303 +YS Sbjct: 32514 VLYS 32503 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 42/46 (91%), Positives = 46/46 (100%) Frame = -3 Query: 583 ERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEV 628 +RV+GFHVLGPNAGEVTQGFAAA+KCGLTK+QLDSTIGIHPVCAEV Sbjct: 10986 KRVIGFHVLGPNAGEVTQGFAAAIKCGLTKEQLDSTIGIHPVCAEV 10849 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/98 (47%), Positives = 51/98 (52%), Gaps = 43/98 (43%) Frame = -2 Query: 188 VMVLDFVTPTPLGTRWG------------------------------------------- 204 VMVLD+VTPTPLGT WG Sbjct: 34219 VMVLDYVTPTPLGTSWGNFLLITDIL*RGISYYMALQFYFGIVFINT*YVLCLLSLLPQG 34040 Query: 205 LGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE 242 LGGTCVNVGCIPKKLMHQAALLGQAL+DSR +GW+ E Sbjct: 34039 LGGTCVNVGCIPKKLMHQAALLGQALKDSRKFGWQFTE 33926 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 32/38 (84%), Positives = 36/38 (94%) Frame = -1 Query: 292 ATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCIS 329 ATN KGKEK+Y+AE+F+IATGERPRYL IPGDKEYCIS Sbjct: 32417 ATNTKGKEKLYTAEKFIIATGERPRYLNIPGDKEYCIS 32304 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/66 (50%), Positives = 41/66 (62%) Frame = -1 Query: 522 TTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKD 581 T+ F + Y C +S + +VYHS+FWPLEWT+P RDNNKCYAKIICN +D Sbjct: 12734 TSFFCVVNYKMCLISVFCS---------QVYHSFFWPLEWTVPGRDNNKCYAKIICNIQD 12582 Query: 582 NERVVG 587 N V Sbjct: 12581 NVSVFS 12564 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 32/38 (84%), Positives = 35/38 (92%) Frame = -3 Query: 514 KCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 551 +CDY NVPTTVFTP+EYGACG SEEKA+EKFGE NIEV Sbjct: 14217 QCDYVNVPTTVFTPMEYGACGFSEEKAMEKFGENNIEV 14104 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 23/41 (56%), Positives = 34/41 (82%) Frame = -1 Query: 128 RKIGGHGPTLKAYQEGRLQKLLKMNGPEDLPKSYDYDLIII 168 ++I H +++A++EG+LQKLL+MNGP L +SYDYDLI+I Sbjct: 39020 KRIFLHFASIQAHEEGKLQKLLEMNGPNHLQESYDYDLIVI 38898 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/35 (62%), Positives = 29/35 (82%) Frame = -2 Query: 406 VEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLA 440 VEQIE GTPG+L+V+A+ST + IEGEYNTV ++ Sbjct: 22105 VEQIEEGTPGKLKVIAKSTTGSQTIEGEYNTVSIS 22001 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/32 (68%), Positives = 27/32 (84%) Frame = -1 Query: 437 VMLAIGRDACTRKIGLETVGVKINEKTGKIPV 468 V+LA+GRDACTRKIGL+ VGVKIN+ G I + Sbjct: 18686 VLLAVGRDACTRKIGLDKVGVKINKM*G*ISL 18591 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 16/22 (72%), Positives = 20/22 (90%) Frame = -3 Query: 628 VFTTLSVTKRSGASILQAGCUG 649 +FTTLSVTKRSG +I+Q+GC G Sbjct: 4296 IFTTLSVTKRSGGNIVQSGC*G 4231 >KN333725.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold10983, whole genome shotgun sequence Length = 157996 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 38/54 (70%), Positives = 47/54 (87%) Frame = -3 Query: 199 LGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMI 252 LGT WGLGGTCVNVGCIPKKLMHQAALLG AL+D+R+YGW + + + HDW +++ Sbjct: 137237 LGTSWGLGGTCVNVGCIPKKLMHQAALLGSALKDARHYGWNISQPIHHDW*KIL 137076 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 26/30 (86%), Positives = 27/30 (90%) Frame = -2 Query: 351 VALECAGFLAGIGLDVTVMVRSILLRGFDQ 380 V+LECAGFL GIGLD TVMVRSI LRGFDQ Sbjct: 128178 VSLECAGFLTGIGLDTTVMVRSIPLRGFDQ 128089 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 26/46 (56%), Positives = 33/46 (71%) Frame = -3 Query: 442 GRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILE 487 GR + + LETVGVK+N +TGKI V E T+VP+IYA+GDI E Sbjct: 114626 GRVPDAKTLNLETVGVKMNSETGKIIVDASEATSVPHIYAVGDITE 114489 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/36 (63%), Positives = 27/36 (75%) Frame = -2 Query: 520 VPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSY 555 VPTTVFTPLEYG GLSEE+AV +G +N EV + Sbjct: 108522 VPTTVFTPLEYGCVGLSEEEAVGCYGADNTEVQKRF 108415 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 27/37 (72%) Frame = -2 Query: 571 CYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALK 607 C+ +++C + +R++G H +GPNAGEV QGFA +K Sbjct: 104928 CF-QMVCLREKEQRLLGLHFIGPNAGEVIQGFALGIK 104821 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 25/43 (58%) Frame = -3 Query: 607 KCGLTKKQLDSTIGIHPVCAEVFTTLSVTKRSGASILQAGCUG 649 +CG T Q+ T+GIHP AE T L +TKRSG GC G Sbjct: 102725 RCGATYSQMMKTVGIHPTSAEEVTKLHITKRSGLDATVTGC*G 102597 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 42/62 (67%) Frame = -3 Query: 382 MANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAI 441 M++ + ++ME HG +F+++ +P KVE++++ G+L+V ++ + + ++TV+ A+ Sbjct: 125480 MSSLVADYMESHGTRFLKKCIPTKVEELDS---GKLQVSWKNADMGKEETDSFDTVIWAV 125310 Query: 442 GR 443 G+ Sbjct: 125309 GK 125304 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 20/26 (76%) Frame = -2 Query: 550 EVYHSYFWPLEWTIPSRDNNKCYAKI 575 +VYH+Y+ PLE+T+ RD +CY K+ Sbjct: 106767 QVYHAYYKPLEFTVAERDATQCYIKV 106690 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 17/30 (56%), Positives = 23/30 (76%) Frame = -1 Query: 491 ELTPVAIQAGRLLAQRLYAGSTVKCDYENV 520 ELTP AI AG+LLA+RL+ S+ DY++V Sbjct: 108871 ELTPTAIAAGKLLARRLFGQSSELMDYDSV 108782 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 14/23 (60%), Positives = 20/23 (86%) Frame = -2 Query: 251 MIEAVQNHIGSLNWGYRVALREK 273 M +AVQN++ SLNWG+RV L++K Sbjct: 136749 MAQAVQNYVKSLNWGHRVQLQDK 136681 >KN323524.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold338, whole genome shotgun sequence Length = 47598 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/49 (51%), Positives = 30/49 (61%) Frame = -2 Query: 584 RVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTL 632 +VVG H+ G E+ QGFA A+K G TK D+TI IHP AE TL Sbjct: 41234 KVVGLHMQGLGCDEMLQGFAVAIKMGATKVDFDNTIAIHPTSAEELVTL 41088 >KN328625.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold5642, whole genome shotgun sequence Length = 45883 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Frame = +1 Query: 490 VELTPVAIQAGRLLAQRLYAGST-VKCDYENVPTTVFTPLEYGACGLSEEKAVEK 543 V L VAI AGR LA RL+ G K DY N+PT VF+ G GL+E ++ K Sbjct: 44110 VSLLTVAIAAGRKLAHRLFEGKKDSKLDYSNIPTVVFSHPPIGTVGLTEGRSQMK 44274 >KN336791.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold14241, whole genome shotgun sequence Length = 34245 Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 31/57 (54%) Frame = -3 Query: 59 LQAYIDGHSVVIFSRSTCTRCTEVKKLFKSLCVPYFVLELDQTEDGRALEGTLSELA 115 +Q I + VVIFS++ C+ C KKLF+ + V Y +ELD + + L ++ Sbjct: 1072 IQETISDNCVVIFSKTRCSYCKMAKKLFQDMNVNYTAVELDMQRNESQFQDILQQMT 902 >KN335453.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold12803, whole genome shotgun sequence Length = 97781 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = -1 Query: 548 NIEVYHS---YFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEV 598 +I ++HS + W LE +P+R+ C+ K+ C+ + G H+ G G+V Sbjct: 10475 HIFLFHSLQHFLWGLEAAVPARNKKSCFCKVSCSGSQVRQAAGRHLEGQK*GQV 10314 >KN348432.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold27076, whole genome shotgun sequence Length = 16753 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Frame = +2 Query: 36 PGKTLP---ENPAGFTSTATADSRALLQAYIDGHSVVIFSRSTCTRCTEVKKLFKSLCVP 92 P TLP + A S A+ RALL A + HS FS T C+E+ +S + Sbjct: 14744 PLPTLPTIYSSAAWLYSAVPANRRALLPAALSRHSQSAFSLETLATCSELPDFSQSAWLA 14923 Query: 93 YFVLELDQTEDGRA 106 + L L E GRA Sbjct: 14924 HVELFLPAQETGRA 14965 >KN329011.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold6000, whole genome shotgun sequence Length = 217412 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 29/43 (67%) Frame = -1 Query: 435 NTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVP 477 + +++ IGR T+ +GLE +GV+++ K G+IPV QT +P Sbjct: 169247 DVLLVCIGRRPFTKNLGLEDLGVELDNK-GRIPVNTRFQTKIP 169122 >KN339168.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold16784, whole genome shotgun sequence Length = 31750 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +1 Query: 506 RLYAGSTVKCDYENVPTTVFTPLEY-GACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIP 564 + +G T D P+ E G+C +K GE+ I + +++F PL+WT+P Sbjct: 17251 HMVSGGTTATDESTTPSPPKPQRETPGSCAAQADKQAPGRGEKKIRLLYAFFSPLQWTLP 17430 Query: 565 SR 566 ++ Sbjct: 17431 AQ 17436 >KN337135.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold14612, whole genome shotgun sequence Length = 75519 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 6/58 (10%) Frame = +2 Query: 196 PTPL---GTRWGLGGTCVNVGCIPKKL-MHQAAL--LGQALQDSRNYGWKVEETVKHD 247 PTP+ +RW L GT + C+P KL +H++ L + LQ S N+ K TVKH+ Sbjct: 24806 PTPVQRWASRWALHGTSYSQSCLPLKLHVHRSDLTICCRLLQGSCNFPLKYLTTVKHE 24979 Database: genome.fa Posted date: Sep 15, 2015 12:21 AM Number of letters in database: 2,188,353,730 Number of sequences in database: 47,351 Lambda K H 0.318 0.137 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 47351 Number of Hits to DB: 1,720,619,510 Number of extensions: 26652460 Number of successful extensions: 110067 Number of sequences better than 10.0: 12 Number of HSP's gapped: 110059 Number of HSP's successfully gapped: 44 Length of query: 649 Length of database: 729,451,243 Length adjustment: 136 Effective length of query: 513 Effective length of database: 723,011,507 Effective search space: 370904903091 Effective search space used: 370904903091 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 53 (25.0 bits)