TBLASTN 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= tr|E1C697|E1C697_CHICK Glutathione peroxidase OS=Gallus gallus GN=GPX7 PE=3 SV=1 (210 letters) Database: genome.fa 47,351 sequences; 2,188,353,730 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value KN343115.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 155 1e-41 KN325713.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 112 7e-27 KN338580.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 107 4e-25 KN347642.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 80 1e-15 KN330210.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 57 1e-07 KN332733.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 55 3e-07 KN325303.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 53 3e-06 KN325192.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 47 2e-04 KN350882.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 46 4e-04 KN337777.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic... 33 5.7 >KN343115.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold21068, whole genome shotgun sequence Length = 77018 Score = 155 bits (392), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 70/80 (87%), Positives = 76/80 (95%) Frame = +2 Query: 77 ASECGFTDSHYKALQQLQKDLGPYHFNVLAFPCNQFGQQEPDTNKEIESFARKTYGASFP 136 ASECG+TDSHYKALQQLQ+DLGPYHFNVLAFPCNQFGQQEPD+NKEIE+FARKTYGA+FP Sbjct: 5396 ASECGYTDSHYKALQQLQRDLGPYHFNVLAFPCNQFGQQEPDSNKEIENFARKTYGATFP 5575 Query: 137 MFSKVAVSGAGAIPAFKYLI 156 +FSK AVSGAGA FKYLI Sbjct: 5576 LFSKTAVSGAGANAVFKYLI 5635 Score = 102 bits (255), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 49/75 (65%), Positives = 59/75 (78%), Gaps = 5/75 (6%) Frame = +2 Query: 141 VAVSGAGAIPAFKYLI-----DSTGEEPTWNFWKYLVDPNGKVVKAWDSTVSVEEIRPHV 195 + +S G+ F Y I +STGEEPTWNFWKYLV+P GKVVKAWDSTVS++EI+P++ Sbjct: 8117 IVISRTGSWFLFLYCIFFSRTESTGEEPTWNFWKYLVNPKGKVVKAWDSTVSIDEIKPYI 8296 Query: 196 TELVRKIILKKKDEL 210 ELVR IILKKKDEL Sbjct: 8297 NELVRNIILKKKDEL 8341 >KN325713.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold2594, whole genome shotgun sequence Length = 144888 Score = 112 bits (280), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 50/86 (58%), Positives = 66/86 (76%) Frame = +1 Query: 71 SLVVNVASECGFTDSHYKALQQLQKDLGPYHFNVLAFPCNQFGQQEPDTNKEIESFARKT 130 SLVVNVAS C TD +Y LQ+L ++ GP HF VLAFPCNQFG+ EP +++EIESFA+ Sbjct: 106582 SLVVNVASYCQHTDKNYIELQELHREFGPSHFTVLAFPCNQFGESEPSSSQEIESFAKGN 106761 Query: 131 YGASFPMFSKVAVSGAGAIPAFKYLI 156 YG +FP+F K+ + G+ A PAFK+L+ Sbjct: 106762 YGVTFPIFYKIKILGSEAEPAFKFLV 106839 Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 31/56 (55%), Positives = 41/56 (73%) Frame = +2 Query: 155 LIDSTGEEPTWNFWKYLVDPNGKVVKAWDSTVSVEEIRPHVTELVRKIILKKKDEL 210 L DS+ +EP WNFWKYLV P GKV+K W +E I+P V L+R+II+KKK++L Sbjct: 108914 LTDSSKKEPRWNFWKYLVSPGGKVMKFWRPEEPIENIKPEVASLIRQIIMKKKEDL 109081 Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 33/70 (47%) Frame = +3 Query: 2 LDPEGSVEHKPSSSFPKVFXXXXXXXXXXXXXXXXXFSATQQKETDFYTFKVVNIRGKLV 61 ++P + K S +VF + K DFY+F+V + +G++V Sbjct: 105789 MEPLATYPLKCSVPKARVFIVFLSMVLCTVMLCLLQLKFLKPKIKDFYSFEVKDSKGRIV 105968 Query: 62 SLEKYRGSVS 71 SLEKYRG VS Sbjct: 105969 SLEKYRGKVS 105998 >KN338580.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold16095, whole genome shotgun sequence Length = 178707 Score = 107 bits (268), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 58/140 (41%), Positives = 82/140 (58%), Gaps = 6/140 (4%) Frame = +2 Query: 49 YTFKVVNIRGKLVSLEKYRGSVSLVVNVASECGFTDSHYKALQQLQKDLGPYHFNVLAFP 108 Y F +I G VSLEKY+ V ++ NVAS+ G D +Y + +LAFP Sbjct: 178286 YYFHAKDIDGNEVSLEKYQRHVCIITNVASK*GKMDVNYTQFVDMYARYAERGLCILAFP 178465 Query: 109 CNQFGQQEPDTNKEIESFARKTYGASFPMFSKVAVSGAGAIPAFKYLID------STGEE 162 CNQFG+QEP N +I++FA + YG F +FSK+ V+G A+P +K+L D + G Sbjct: 178466 CNQFGKQEPGDNAQIKAFAER-YGVKFDVFSKIDVNGDEALPLWKWLKDQPKGRGTLGNA 178642 Query: 163 PTWNFWKYLVDPNGKVVKAW 182 WNF K+L+D G+VVK + Sbjct: 178643 IKWNFRKFLIDQQGQVVKRY 178702 >KN347642.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold26060, whole genome shotgun sequence Length = 65081 Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 43/71 (60%), Positives = 47/71 (66%) Frame = +2 Query: 1 MLDPEGSVEHKPSSSFPKVFXXXXXXXXXXXXXXXXXFSATQQKETDFYTFKVVNIRGKL 60 MLDPEGSVEH+ + S P+ SA+QQKE DFYTFKVVNIRGKL Sbjct: 60353 MLDPEGSVEHRLAPSLPRAALLSLAMLLAVAALLLLALSASQQKEVDFYTFKVVNIRGKL 60532 Query: 61 VSLEKYRGSVS 71 VSLEKYRGSVS Sbjct: 60533 VSLEKYRGSVS 60565 >KN330210.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold7192, whole genome shotgun sequence Length = 293575 Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 40/69 (57%) Frame = +3 Query: 58 GKLVSLEKYRGSVSLVVNVASECGFTDSHYKALQQLQKDLGPYHFNVLAFPCNQFGQQEP 117 G VSLEKYRG ++ +VAS+ TD +Y L + +LAFPCNQF +Q P Sbjct: 44643 GSHVSLEKYRGYACIITSVASK*DKTDINYTQLVDMYAT*TERCLRILAFPCNQFKKQ*P 44822 Query: 118 DTNKEIESF 126 N +I++F Sbjct: 44823 GNNAQIKAF 44849 >KN332733.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold9928, whole genome shotgun sequence Length = 64086 Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 36/68 (52%) Frame = +1 Query: 48 FYTFKVVNIRGKLVSLEKYRGSVSLVVNVASECGFTDSHYKALQQLQKDLGPYHFNVLAF 107 FY + ++G+ V +RG V L+ NVAS G T Y L QLQ P VL F Sbjct: 35002 FYDLSAITLQGEKVDFNNFRGRVVLIENVASL*GTTVRDYTQLNQLQARY-PRRLVVLGF 35178 Query: 108 PCNQFGQQ 115 PCNQFG Q Sbjct: 35179 PCNQFGYQ 35202 Score = 36.6 bits (83), Expect = 0.60, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 28/114 (24%) Frame = +1 Query: 115 QEPDTNKEIES---FARKTYG--ASFPMFSKVAVSGAGAIPAFKYL-------IDSTGE- 161 QE TN+EI + + R G +F +F K V+G P F YL +D+ Sbjct: 37009 QENCTNEEILNSLKYVRPGGGFEPNFTLFQKCQVNGQDTHPVFAYLKAHLPAPVDNPAAL 37188 Query: 162 ---------------EPTWNFWKYLVDPNGKVVKAWDSTVSVEEIRPHVTELVR 200 + TWNF K+LV P G+ K + + P + L++ Sbjct: 37189 MTDPRFLVWSPVQRADVTWNFEKFLVGPEGEPFKRYSPKFQTSHVEPDIQRLLK 37350 >KN325303.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold2189, whole genome shotgun sequence Length = 63301 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Frame = -1 Query: 58 GKLVSLEKYRGSVSLVVNVASECGFTDSHYKALQQLQKDLGPYHFNVLAFPCNQFGQQEP 117 G+ ++L+ G V LV NVAS G T + L +LQ+ GP VL FPCNQFG Q P Sbjct: 30280 GEPLALDSLLGRVLLVSNVASL*GTTARDFVQLNELQERYGPRGLVVLGFPCNQFGHQVP 30101 Query: 118 DTNKEIESF-ARKTYGASFP 136 R G +P Sbjct: 30100 GGAGPAHELPGRAGRGRCWP 30041 Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 23/95 (24%) Frame = -1 Query: 131 YGASFPMFSKVAVSGAGAIPAFKYLIDST---GEEP--------------------TWNF 167 Y +F MF K V+G A P FK+L ++ ++P +WNF Sbjct: 24811 YEPNFTMFEKCDVNGDNAHPLFKFLKEALPFPHDDPVALMTNPQYIIWSPVCRNDISWNF 24632 Query: 168 WKYLVDPNGKVVKAWDSTVSVEEIRPHVTELVRKI 202 K+L+ P+G K + +I+ + +L+++I Sbjct: 24631 EKFLIGPDGIPFKRYSRRFETIKIQDDIEKLLQQI 24527 >KN325192.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold2042, whole genome shotgun sequence Length = 57782 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 34/75 (45%) Frame = +2 Query: 90 LQQLQKDLGPYHFNVLAFPCNQFGQQEPDTNKEIESFARKTYGASFPMFSKVAVSGAGAI 149 L LQ +LGPY VL FP NQFG+QEP N EI P V G G Sbjct: 38309 LNALQSELGPYGLVVLGFPSNQFGKQEPGQNAEI-----------LPALK*VPEPGLG-- 38449 Query: 150 PAFKYLIDSTGEEPT 164 + + STG PT Sbjct: 38450 ----WGLPSTGSAPT 38482 >KN350882.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold29685, whole genome shotgun sequence Length = 211812 Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 30/54 (55%) Frame = -2 Query: 62 SLEKYRGSVSLVVNVASECGFTDSHYKALQQLQKDLGPYHFNVLAFPCNQFGQQ 115 SL RG V ++ NVAS+ G TD +Y + +LAFPCNQFG+Q Sbjct: 120869 SLPLLRGHVCIITNVASK*GKTDVNYTQFVDMYARYAERGLRILAFPCNQFGKQ 120708 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 30/43 (69%) Frame = -1 Query: 115 QEPDTNKEIESFARKTYGASFPMFSKVAVSGAGAIPAFKYLID 157 QEP N +I++FA + YG F MFSK+ V+G A+P +K+L D Sbjct: 120123 QEPGDNAQIKAFAER-YGVKFDMFSKIDVNGDDALPLWKWLKD 119998 >KN337777.1 Gavialis gangeticus isolate Ggan-Ray unplaced genomic scaffold scaffold15268, whole genome shotgun sequence Length = 319695 Score = 33.5 bits (75), Expect = 5.7, Method: Compositional matrix adjust. Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = +3 Query: 91 QQLQKDLGPYHFNVLAFPCNQFGQQEPDTNK 121 + L DLG +F+VL+FPC+++ +Q TNK Sbjct: 101268 EMLNLDLGSKYFSVLSFPCSKYKRQ*EITNK 101360 Database: genome.fa Posted date: Sep 15, 2015 12:21 AM Number of letters in database: 2,188,353,730 Number of sequences in database: 47,351 Lambda K H 0.317 0.133 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 47351 Number of Hits to DB: 495,524,014 Number of extensions: 6600011 Number of successful extensions: 27654 Number of sequences better than 10.0: 10 Number of HSP's gapped: 27649 Number of HSP's successfully gapped: 16 Length of query: 210 Length of database: 729,451,243 Length adjustment: 124 Effective length of query: 86 Effective length of database: 723,579,719 Effective search space: 62227855834 Effective search space used: 62227855834 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 49 (23.5 bits)