Command line: [exonerate -m p2g --showtargetgff -q SelW/SelW_U.fa -t SelW/SUBSEQ/KB229136.1_5_subseq.txt --exhaustive yes]
Hostname: [luke]

C4 Alignment:
------------
         Query:  SelW
        Target: KB229136.1:subseq(1070263,25113) Odobenus rosmarus divergens isolate Ivan unplaced genomic scaffold Scaffold259, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 125
   Query range: 0 -> 39
  Target range: 24999 -> 25113

     1 : AlaLeuThrValArgValIleTyrCysGlyAlaUnkGlyHisLysCysLysTyrLeuLys :    20
         |||! !||||||! !|||:!!||||||||||||   |||:!!:!!|||  !|||! !|||
         AlaProThrValThrValValTyrCysGlyAla***GlyTyrGluCysTrpTyrProLys
 25000 : GCCCCCACCGTCACGGTTGTTTATTGTGGCGCTTGAGGCTACGAGTGTTGGTACCCTAAG : 25057

    21 : LeuLysLysLysLeuGluAspAspValProLysCysLeuAspIleCysGlyGluGly :    39
         |||   ||||||:!!||||||!!: !!|||!:!||||||||||||||||||:!!|||
         Leu---LysLysValGluAspGluPheProArgCysLeuAspIleCysGlyLysGly
 25058 : CTC---AAGAAGGTAGAAGATGAGTTCCCCAGATGCCTGGACATCTGCGGCAAGGGC : 25113

vulgar:  0 39 . KB229136.1:subseq(1070263,25113) 24999 25113 + 125 M 21 63 G 1 0 M 17 51
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2015-11-26
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KB229136.1:subseq(1070263,25113)	exonerate:protein2genome:local	gene	25000	25113	125	+	.	gene_id 1 ; sequence  ; gene_orientation .
KB229136.1:subseq(1070263,25113)	exonerate:protein2genome:local	cds	25000	25113	.	+	.	
KB229136.1:subseq(1070263,25113)	exonerate:protein2genome:local	exon	25000	25113	.	+	.	insertions 0 ; deletions 1
KB229136.1:subseq(1070263,25113)	exonerate:protein2genome:local	similarity	25000	25113	125	+	.	alignment_id 1 ; Query  ; Align 25000 1 63 ; Align 25063 23 51
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis