Command line: [exonerate -m p2g --showtargetgff -q SelR1/SelR1_U.fa -t SelR1/SUBSEQ/KB229056.1_1_subseq.txt --exhaustive yes]
Hostname: [luke]

C4 Alignment:
------------
         Query:  SelR1
        Target: KB229056.1:subseq(1658230,25122) Odobenus rosmarus divergens isolate Ivan unplaced genomic scaffold Scaffold179, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 208
   Query range: 61 -> 102
  Target range: 25122 -> 24999

    62 : HisValSerCysGlyArgCysGlyAsnGlyLeuGlyHisGluPheLeuAsnAspGlyPro :    81
         !!.||||||||||||!:!||||||||||||||||||||||||||||||||||||||||||
         GlnValSerCysGlyLysCysGlyAsnGlyLeuGlyHisGluPheLeuAsnAspGlyPro
 25122 : CAGGTGTCCTGCGGCAAATGTGGGAACGGGCTGGGCCATGAGTTCCTGAATGATGGCCCC : 25065

    82 : LysProGlyGlnSerArgPheUnkIlePheSerSerSerLeuLysPheIleProLysGly :   101
         |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||
         LysProGlyGlnSerArgPhe***IlePheSerSerSerLeuLysPheIleProLysGly
 25064 : AAGCCGGGGCAGTCCCGCTTCTGAATATTTAGCAGTTCGCTGAAGTTCATCCCGAAAGGT : 25005

   102 : Glu :   102
         |||
         Glu
 25004 : GAG : 25000

vulgar:  61 102 . KB229056.1:subseq(1658230,25122) 25122 24999 - 208 M 41 123
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2015-11-26
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KB229056.1:subseq(1658230,25122)	exonerate:protein2genome:local	gene	25000	25122	208	-	.	gene_id 1 ; sequence  ; gene_orientation .
KB229056.1:subseq(1658230,25122)	exonerate:protein2genome:local	cds	25000	25122	.	-	.	
KB229056.1:subseq(1658230,25122)	exonerate:protein2genome:local	exon	25000	25122	.	-	.	insertions 0 ; deletions 0
KB229056.1:subseq(1658230,25122)	exonerate:protein2genome:local	similarity	25000	25122	208	-	.	alignment_id 1 ; Query  ; Align 25123 62 123
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis