Command line: [exonerate -m p2g --showtargetgff -q SelOn/SelOn_U.fa -t SelOn/SUBSEQ/KB229324.1_3_subseq.txt --exhaustive yes]
Hostname: [luke]

C4 Alignment:
------------
         Query:  SelO 
        Target: KB229324.1:subseq(506913,25170) Odobenus rosmarus divergens isolate Ivan unplaced genomic scaffold Scaffold447, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 249
   Query range: 260 -> 317
  Target range: 25170 -> 24999

   261 : GluThrMetHisLeuThrGlyAlaAspPheThrAsnThrPheHisLeuLeuSerSerPhe :   280
         |||  !  !|||:!! !!||||||||||||||||||||||||:!!|||||||||||||||
         GluGlnTrpHisValProGlyAlaAspPheThrAsnThrPheTyrLeuLeuSerSerPhe
 25170 : GAGCAGTGGCATGTTCCAGGGGCCGACTTCACAAACACCTTCTACTTGCTGAGCTCCTTC : 25113

   281 : ProValGlyProGluProGlnGlyMetProGluPheLeuAspAlaLeuThrAlaGlnCys :   300
         ||||||||||||||| !!! !|||:!!||||||||||||! !||||||||||||||||||
         ProValGlyProGluSerLeuGlyLeuProGluPheLeuAlaAlaLeuThrAlaGlnCys
 25112 : CCAGTTGGGCCAGAGTCCCTGGGCCTGCCTGAGTTCCTGGCCGCGCTGACTGCACAGTGT : 25053

   301 : AlaSerLeuGluGluLeuLysLeuAlaPheArgProGlnMetAspProArg :   317
         |||||||||||||||||||||||||||||||||||||||||||||||||||
         AlaSerLeuGluGluLeuLysLeuAlaPheArgProGlnMetAspProArg
 25052 : GCCTCCCTAGAGGAGCTGAAGCTTGCCTTCCGACCCCAGATGGATCCCCGG : 25000

vulgar:  260 317 . KB229324.1:subseq(506913,25170) 25170 24999 - 249 M 57 171
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2015-11-26
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KB229324.1:subseq(506913,25170)	exonerate:protein2genome:local	gene	25000	25170	249	-	.	gene_id 1 ; sequence  ; gene_orientation .
KB229324.1:subseq(506913,25170)	exonerate:protein2genome:local	cds	25000	25170	.	-	.	
KB229324.1:subseq(506913,25170)	exonerate:protein2genome:local	exon	25000	25170	.	-	.	insertions 0 ; deletions 0
KB229324.1:subseq(506913,25170)	exonerate:protein2genome:local	similarity	25000	25170	249	-	.	alignment_id 1 ; Query  ; Align 25171 261 171
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis