Command line: [exonerate -m p2g --showtargetgff -q Sel15/Sel15_U.fa -t Sel15/SUBSEQ/KB229690.1_1_subseq.txt --exhaustive yes]
Hostname: [luke]

C4 Alignment:
------------
         Query:  Sel15
        Target: KB229690.1:subseq(81363,50179) Odobenus rosmarus divergens isolate Ivan unplaced genomic scaffold Scaffold813, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 665
   Query range: 0 -> 148
  Target range: 49512 -> 50179

     1 : MetAlaAlaGlyProSerGlyCysLeuValProAlaPheGlyLeuArgLeuLeuLeuAla :    20
         |||!.!|||||| !!||||||!  |||  !||||||||||||||||||||||||||||||
         MetValAlaGlySerSerGlyLeuLeuProProAlaPheGlyLeuArgLeuLeuLeuAla
 49513 : ATGGTGGCTGGGTCGAGTGGATTGCTCCCACCGGCGTTTGGGCTGCGATTGCTCTTGGCT : 49570

    21 : ThrValLeuGlnAlaValSerAlaPheGlyAlaGluPheSerSerGluAlaCysArgGlu :    40
         .!!|||||||||.!!|||||||||||||||.!!|||||||||||||||||||||||||||
         AlaValLeuGlnThrValSerAlaPheGlyThrGluPheSerSerGluAlaCysArgGlu
 49571 : GCTGTACTTCAAACGGTGTCTGCATTTGGGACAGAGTTTTCATCAGAGGCTTGCAGAGAG : 49630

    41 : LeuGlyPheSerSerAsnLeuLeuCysSerSerCysAspLeuLeuGlyGlnPheAsnLeu :    60
         :!!|||||||||||||||! !|||||||||||||||||||||||||||||||||||||||
         IleGlyPheSerSerAsn***LeuCysSerSerCysAspLeuLeuGlyGlnPheAsnLeu
 49631 : ATAGGCTTCTCCAGCAACTAGCTCTGCAGCTCTTGTGACCTTCTTGGACAGTTTAACCTG : 49690

    61 : LeuGlnLeuAspProAspCysArgGlyCysCysGlnGluGluAlaGlnPheGluThrLys :    80
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         LeuGlnLeuAspProAspCysArgGlyCysCysGlnGluGluAlaGlnPheGluThrLys
 49691 : CTTCAGCTCGATCCTGACTGTAGAGGATGCTGTCAGGAAGAAGCACAGTTTGAAACAAAA : 49750

    81 : LysLeuTyrAlaGlyAlaIleLeuGluValCysGlyUnkLysLeuGly{Ar}  >>>> T :    97
         |||:!!||||||||||||||||||||||||||||||   |||||||||{||}        
         LysValTyrAlaGlyAlaIleLeuGluValCysGly***LysLeuGly{Ar}++      
 49751 : AAGGTTTATGCAGGTGCTATTCTTGAAGTTTGTGGATGAAAATTGGGG{ag}gt...... : 49805

    98 : arget Intron 1 >>>>  {g}PheProGlnValGlnAlaPheValArgSerAspLys :   109
             223 bp           {|}||||||||||||||||||||||||||||||||||||
                            ++{g}PheProGlnValGlnAlaPheValArgSerAspLys
 49806 : ...................ag{G}TTCCCTCAAGTCCAAGCTTTTGTCAGGAGTGATAAA : 50060

   110 : ProLysLeuPheArgGlyLeuGlnIleLysTyrValArgGlySerAspProValLeuLys :   129
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         ProLysLeuPheArgGlyLeuGlnIleLysTyrValArgGlySerAspProValLeuLys
 50061 : CCCAAACTATTCAGAGGACTACAAATCAAGTATGTTCGTGGTTCAGATCCTGTATTAAAG : 50120

   130 : LeuLeuAspAspAsnGlyAsnIleAlaGluGluLeuSerIleLeuLysTrpAsnThr :   148
         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         LeuLeuAspAspAsnGlyAsnIleAlaGluGluLeuSerIleLeuLysTrpAsnThr
 50121 : CTTTTGGATGACAACGGGAATATTGCTGAAGAATTAAGCATCCTCAAATGGAACACA : 50179

vulgar:  0 148 . KB229690.1:subseq(81363,50179) 49512 50179 + 665 M 96 288 S 0 2 5 0 2 I 0 219 3 0 2 S 1 1 M 51 153
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2015-11-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KB229690.1:subseq(81363,50179)	exonerate:protein2genome:local	gene	49513	50179	665	+	.	gene_id 1 ; sequence  ; gene_orientation +
KB229690.1:subseq(81363,50179)	exonerate:protein2genome:local	cds	49513	49802	.	+	.	
KB229690.1:subseq(81363,50179)	exonerate:protein2genome:local	exon	49513	49802	.	+	.	insertions 0 ; deletions 0
KB229690.1:subseq(81363,50179)	exonerate:protein2genome:local	splice5	49803	49804	.	+	.	intron_id 1 ; splice_site "gt"
KB229690.1:subseq(81363,50179)	exonerate:protein2genome:local	intron	49803	50025	.	+	.	intron_id 1
KB229690.1:subseq(81363,50179)	exonerate:protein2genome:local	splice3	50024	50025	.	+	.	intron_id 0 ; splice_site "ag"
KB229690.1:subseq(81363,50179)	exonerate:protein2genome:local	cds	50026	50179	.	+	.	
KB229690.1:subseq(81363,50179)	exonerate:protein2genome:local	exon	50026	50179	.	+	.	insertions 0 ; deletions 0
KB229690.1:subseq(81363,50179)	exonerate:protein2genome:local	similarity	49513	50179	665	+	.	alignment_id 1 ; Query  ; Align 49513 1 288 ; Align 50027 98 153
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis