Command line: [exonerate -m p2g --showtargetgff -q SCLY2n/SCLY2n_U.fa -t SCLY2n/SUBSEQ/KB229365.1_1_subseq.txt --exhaustive yes]
Hostname: [luke]

C4 Alignment:
------------
         Query: SPP00002941_2.0 # Protein # selenocysteine lyase (SCLY) # Human (Homo sapiens)
        Target: KB229365.1:subseq(1032040,25140) Odobenus rosmarus divergens isolate Ivan unplaced genomic scaffold Scaffold488, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 205
   Query range: 406 -> 453
  Target range: 25140 -> 24999

   407 : ValLeuLeuSerTyrGlyValProPheAspValAlaArgAsnAlaLeuArgLeuSerVal :   426
         ||||||||||||! !|||:!!|||||||||||||||||||||||||||||||||||||||
         ValLeuLeuSerCysGlyIleProPheAspValAlaArgAsnAlaLeuArgLeuSerVal
 25140 : GTGCTGCTGAGCTGTGGCATTCCCTTCGACGTGGCCAGGAACGCACTCCGGCTCAGCGTG : 25083

   427 : GlyArgSerThrThrArgAlaGluValAspLeuValValGlnAspLeuLysGlnAlaVal :   446
         |||||||||||||||||||||||||||||||||:!!||||||||||||||||||||||||
         GlyArgSerThrThrArgAlaGluValAspLeuIleValGlnAspLeuLysGlnAlaVal
 25082 : GGCCGCAGCACCACCAGGGCCGAGGTGGACCTCATCGTGCAGGACCTGAAGCAGGCCGTG : 25023

   447 : AlaGlnLeuGluAspGlnAla :   453
         ||||||||||||! !||||||
         AlaGlnLeuGluGlyGlnAla
 25022 : GCCCAGCTGGAGGGCCAGGCC : 25000

vulgar: SPP00002941_2.0 406 453 . KB229365.1:subseq(1032040,25140) 25140 24999 - 205 M 47 141
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2015-11-25
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KB229365.1:subseq(1032040,25140)	exonerate:protein2genome:local	gene	25000	25140	205	-	.	gene_id 1 ; sequence SPP00002941_2.0 ; gene_orientation .
KB229365.1:subseq(1032040,25140)	exonerate:protein2genome:local	cds	25000	25140	.	-	.	
KB229365.1:subseq(1032040,25140)	exonerate:protein2genome:local	exon	25000	25140	.	-	.	insertions 0 ; deletions 0
KB229365.1:subseq(1032040,25140)	exonerate:protein2genome:local	similarity	25000	25140	205	-	.	alignment_id 1 ; Query SPP00002941_2.0 ; Align 25141 407 141
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis