Command line: [exonerate -m p2g --showtargetgff -q GPx7n/GPx7n_U.fa -t GPx7n/SUBSEQ/KB228992.1_0_subseq.txt --exhaustive yes]
Hostname: [luke]

C4 Alignment:
------------
         Query: SPP00000040_2.0 # Protein # Glutathione peroxidase 7 (GPx7) # Human (Homo sapiens)
        Target: KB228992.1:subseq(2036846,25269) Odobenus rosmarus divergens isolate Ivan unplaced genomic scaffold Scaffold115, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 638
   Query range: 0 -> 132
  Target range: 20312 -> 25269

     1 : MetValAlaAlaThrValAlaAlaAlaTrpLeuLeuLeuTrpAlaAlaAlaCysAlaGln :    20
         :!::!!!.!|||.!!|||!.!|||!.!||||||||||||! !||||||||||||||||||
         ValMetValAlaAlaValValAlaValTrpLeuLeuLeuSerAlaAlaAlaCysAlaGln
 20313 : GTCATGGTGGCTGCAGTGGTGGCGGTGTGGCTGCTCCTGTCGGCCGCGGCCTGCGCGCAG : 20370

    21 : GlnGluGlnAspPheTyrAspPheLysAlaValAsnIleArgGlyLysLeuValSerLeu :    40
         !:!|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         ArgGluGlnAspPheTyrAspPheLysAlaValAsnIleArgGlyLysLeuValSerLeu
 20371 : CGGGAGCAGGACTTCTACGACTTCAAGGCGGTCAACATCCGGGGCAAGTTGGTGTCACTG : 20430

    41 : GluLysTyrArgGlySer  >>>> Target Intron 1 >>>>  ValSerLeuValV :    51
         ||||||||||||||||||           4561 bp           |||||||||||||
         GluLysTyrArgGlySer++                         ++ValSerLeuValV
 20431 : GAGAAGTACCGAGGCTCGgt.........................agGTGTCCCTGGTGG : 25024

    52 : alAsnValAlaSerGluCysGlyPheThrAspGlnHisTyrArgAlaLeuGlnGlnLeuG :    71
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         alAsnValAlaSerGluCysGlyPheThrAspGlnHisTyrArgAlaLeuGlnGlnLeuG
 25025 : TGAACGTGGCTAGCGAGTGCGGCTTCACAGACCAGCACTACCGAGCCTTGCAGCAGCTGC : 25084

    72 : lnArgAspLeuGlyProHisHisPheAsnValLeuAlaPheProCysAsnGlnPheGlyG :    91
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         lnArgAspLeuGlyProHisHisPheAsnValLeuAlaPheProCysAsnGlnPheGlyG
 25085 : AGCGGGACCTGGGGCCCCACCACTTCAATGTGCTTGCCTTCCCCTGCAACCAGTTCGGCC : 25144

    92 : lnGlnGluProAspSerAsnLysGluIleGluSerPheAlaArgArgThrTyrSerValS :   111
         ||||||||||||||!!!|||||||||||||||||||||||||||||||||||||||||||
         lnGlnGluProAspThrAsnLysGluIleGluSerPheAlaArgArgThrTyrSerValS
 25145 : AGCAGGAGCCCGATACCAACAAGGAGATCGAGAGCTTCGCCCGCCGCACCTACAGTGTTT : 25204

   112 : erPheProMetPheSerLysIleAlaValThrGlyThrGlyAlaHisProAlaPheLysT :   131
         ||||||||||||||||||||:!!|||||||||||||||||||||||||||||||||||||
         erPheProMetPheSerLysValAlaValThrGlyThrGlyAlaHisProAlaPheLysT
 25205 : CTTTTCCCATGTTTAGCAAGGTCGCAGTCACAGGCACTGGTGCCCACCCTGCCTTCAAGT : 25264

   132 : yrLeu :   132
         |||||
         yrLeu
 25265 : ACCTG : 25269

vulgar: SPP00000040_2.0 0 132 . KB228992.1:subseq(2036846,25269) 20312 25269 + 638 M 46 138 5 0 2 I 0 4557 3 0 2 M 86 258
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2015-11-25
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KB228992.1:subseq(2036846,25269)	exonerate:protein2genome:local	gene	20313	25269	638	+	.	gene_id 1 ; sequence SPP00000040_2.0 ; gene_orientation +
KB228992.1:subseq(2036846,25269)	exonerate:protein2genome:local	cds	20313	20450	.	+	.	
KB228992.1:subseq(2036846,25269)	exonerate:protein2genome:local	exon	20313	20450	.	+	.	insertions 0 ; deletions 0
KB228992.1:subseq(2036846,25269)	exonerate:protein2genome:local	splice5	20451	20452	.	+	.	intron_id 1 ; splice_site "GT"
KB228992.1:subseq(2036846,25269)	exonerate:protein2genome:local	intron	20451	25011	.	+	.	intron_id 1
KB228992.1:subseq(2036846,25269)	exonerate:protein2genome:local	splice3	25010	25011	.	+	.	intron_id 0 ; splice_site "AG"
KB228992.1:subseq(2036846,25269)	exonerate:protein2genome:local	cds	25012	25269	.	+	.	
KB228992.1:subseq(2036846,25269)	exonerate:protein2genome:local	exon	25012	25269	.	+	.	insertions 0 ; deletions 0
KB228992.1:subseq(2036846,25269)	exonerate:protein2genome:local	similarity	20313	25269	638	+	.	alignment_id 1 ; Query SPP00000040_2.0 ; Align 20313 1 138 ; Align 25012 47 258
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis