Command line: [exonerate -m p2g --showtargetgff -q GPx1/GPx1_U.fa -t GPx1/SUBSEQ/KB229954.1_0_subseq.txt --exhaustive yes]
Hostname: [luke]

C4 Alignment:
------------
         Query:  GPx1
        Target: KB229954.1:subseq(321840,50545) Odobenus rosmarus divergens isolate Ivan unplaced genomic scaffold Scaffold1077, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 831
   Query range: 26 -> 203
  Target range: 50530 -> 49999

    27 : GlyGluProValSerLeuGlySerLeuArgGlyLysValLeuLeuIleGluAsnValAla :    46
         |||  ! !!:!!||||||||||||||||||||||||||||||||||||||||||||||||
         GlyTrpThrLeuSerLeuGlySerLeuArgGlyLysValLeuLeuIleGluAsnValAla
 50530 : GGTTGGACCCTGAGCCTGGGTTCCCTGCGGGGCAAGGTGCTGCTCATCGAGAATGTGGCG : 50473

    47 : SerLeuUnkGlyThrThrValArgAspTyrThrGlnMetAsnGluLeuGlnArgArgLeu :    66
         ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||
         SerLeu***GlyThrThrValArgAspTyrThrGlnMetAsnGluLeuGlnArgArgLeu
 50472 : TCGCTTTGAGGCACAACGGTCCGGGACTACACCCAGATGAACGAGCTGCAGCGGCGCCTC : 50413

    67 : GlyProArgGlyLeuValValLeuGlyPheProCysAsnGlnPheGlyHisGlnGluAsn :    86
         |||||||||||||||||||||||| !!|||||| !!||||||||||||||||||||||||
         GlyProArgGlyLeuValValLeuCysPheProGlyAsnGlnPheGlyHisGlnGluAsn
 50412 : GGGCCCCGGGGCCTGGTTGTGCTCTGCTTCCCGGGCAACCAGTTCGGGCATCAGGAGAAC : 50353

    87 : AlaLysAsnGluGluIleLeuAsnSerLeuLysTyrValArgProGlyGlyGlyPheGlu :   106
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         AlaLysAsnGluGluIleLeuAsnSerLeuLysTyrValArgProGlyGlyGlyPheGlu
 50352 : GCTAAGAACGAAGAGATCCTGAATTCCCTCAAGTACGTCCGACCTGGCGGCGGGTTCGAG : 50293

   107 : ProAsnPheMetLeuPheGluLysCysGluValAsnGlyAlaGlyAlaHisProLeuPhe :   126
         |||||||||! !||||||||||||||||||||||||||||||  !|||||||||||||||
         ProAsnPheThrLeuPheGluLysCysGluValAsnGlyAlaGlnAlaHisProLeuPhe
 50292 : CCCAACTTCACGCTTTTTGAGAAGTGCGAGGTGAACGGCGCGCAGGCGCACCCCCTCTTC : 50233

   127 : AlaPheLeuArgGluAlaLeuProAlaProSerAspAspAlaThrAlaLeuMetThrAsp :   146
         |||||||||||||||:::||||||||||||||||||||||||||||||||||||||||||
         AlaPheLeuArgGluSerLeuProAlaProSerAspAspAlaThrAlaLeuMetThrAsp
 50232 : GCCTTCCTGCGGGagtccctgcctgcccccagtgACGACGCCACTGCGCTCATGACCGAC : 50173

   147 : ProLysLeuIleThrTrpSerProValCysArgAsnAspValAlaTrpAsnPheGluLys :   166
         ||||||!!!|||! !||||||||||||||||||||||||:!!||||||||||||||||||
         ProLysPheIleIleTrpSerProValCysArgAsnAspIleAlaTrpAsnPheGluLys
 50172 : CCCAAGTTCATCATCTGGTCTCCCGTGTGCCGCAACGACATCGCCTGGAACTTTGAGAAG : 50113

   167 : PheLeuValGlyProAspGlyValProLeuArgArgTyrSerArgArgPheGlnThrIle :   186
         |||||||||||||||||||||||||||:!!||||||||||||!.!||||||  !||||||
         PheLeuValGlyProAspGlyValProValArgArgTyrSerHisArgPheAlaThrIle
 50112 : TTCCTGGTGGGCCCAGATGGTGTGCCTGTGCGCAGGTACAGCCACCGCTTTGCAACCATC : 50053

   187 : AspIleGluProAspIleGluAlaLeuLeuSerGlnGlyProSerCysAla :   203
         |||! !||||||||||||||||||||||||||||||||||||||| !!|||
         AspThrGluProAspIleGluAlaLeuLeuSerGlnGlyProSerSerAla
 50052 : GATACTGAGCCTGACATCGAAGCCCTGCTGTCCCAGGGGCCCAGCAGTGCC : 50000

vulgar:  26 203 . KB229954.1:subseq(321840,50545) 50530 49999 - 831 M 177 531
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2015-11-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KB229954.1:subseq(321840,50545)	exonerate:protein2genome:local	gene	50000	50530	831	-	.	gene_id 1 ; sequence  ; gene_orientation .
KB229954.1:subseq(321840,50545)	exonerate:protein2genome:local	cds	50000	50530	.	-	.	
KB229954.1:subseq(321840,50545)	exonerate:protein2genome:local	exon	50000	50530	.	-	.	insertions 0 ; deletions 0
KB229954.1:subseq(321840,50545)	exonerate:protein2genome:local	similarity	50000	50530	831	-	.	alignment_id 1 ; Query  ; Align 50531 27 531
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis