Command line: [exonerate -m p2g --showtargetgff -q DI3/DI3_U.fa -t DI3/SUBSEQ/KB228920.1_0_subseq.txt --exhaustive yes]
Hostname: [luke]

C4 Alignment:
------------
         Query:  DI3
        Target: KB228920.1:subseq(2149238,50797) Odobenus rosmarus divergens isolate Ivan unplaced genomic scaffold Scaffold43, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 1413
   Query range: 0 -> 278
  Target range: 49963 -> 50797

     1 : MetLeuArgSerLeuLeuLeuHisSerLeuArgLeuCysAlaGlnThrAlaSerCysLeu :    20
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         MetLeuArgSerLeuLeuLeuHisSerLeuArgLeuCysAlaGlnThrAlaSerCysLeu
 49964 : ATGCTCCGCTCCCTGCTGCTTCACTCCCTGAGGCTCTGCGCCCAGACGGCCTCGTGCCTC : 50021

    21 : ValLeuPheProArgPheLeuGlyThrAlaPheMetLeuTrpLeuLeuAspPheLeuCys :    40
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         ValLeuPheProArgPheLeuGlyThrAlaPheMetLeuTrpLeuLeuAspPheLeuCys
 50022 : GTGCTCTTCCCGCGCTTCCTCGGCACGGCCTTCATGCTCTGGCTCCTCGACTTCCTGTGC : 50081

    41 : IleArgLysHisPheLeuGlyArgArgArgArgGlyGlnProGluProGluValGluLeu :    60
         ||||||||||||||||||||||||||||||||||||||||||||||||! !|||||||||
         IleArgLysHisPheLeuGlyArgArgArgArgGlyGlnProGluProAlaValGluLeu
 50082 : ATCCGCAAGCATTTCCtgggccgccgccgccggggtCAGCCCGAACCCGCAGTGGAGCTC : 50141

    61 : AsnSerGluGlyGluGluValProProAspAspProProIleCysValSerAspAspAsn :    80
         :!!|||!!:||||||||||||||||||||||||||||||:!!||||||||||||||||||
         AspSerAspGlyGluGluValProProAspAspProProValCysValSerAspAspAsn
 50142 : GACAGTGATGGCGAGGAGGTGCCCCCGGACGACCCGCCTGTCTGCGTGTCCGATGACAAC : 50201

    81 : ArgLeuCysThrLeuAlaSerLeuLysAlaValTrpHisGlyGlnLysLeuAspPhePhe :   100
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         ArgLeuCysThrLeuAlaSerLeuLysAlaValTrpHisGlyGlnLysLeuAspPhePhe
 50202 : CGCCTGTGCACCCTGGCGTCGCTGAAGGCCGTGTGGCACGGCCAGAAGTTGGATTTCTTC : 50261

   101 : LysGlnAlaHisGluGlyGlyProAlaProAsnSerGluValValLeuProAspGlyPhe :   120
         |||||||||||||||||||||||||||||||||||||||||||||||||||:!!||||||
         LysGlnAlaHisGluGlyGlyProAlaProAsnSerGluValValLeuProAsnGlyPhe
 50262 : AAGCAGGCGCATGAGGGCGGTCCAGCTCCCAACTCCGAGGTGGTCCTGCCCAATGGCTTC : 50321

   121 : GlnSerGlnHisIleLeuAspTyrAlaGlnGlyAsnArgProLeuValLeuAsnPheGly :   140
         |||!:!|||||||||||||||||||||::!||||||||||||||||||||||||||||||
         GlnAsnGlnHisIleLeuAspTyrAlaArgGlyAsnArgProLeuValLeuAsnPheGly
 50322 : CAGAACCAGCACATCCTTGACTACGCGAGAGGGAACCGCCCGCTGGTTCTCAATTTCGGC : 50381

   141 : SerCysThrUnkProProPheMetAlaArgMetSerAlaPheGlnArgLeuValThrLys :   160
         |||||||||   ||||||||||||||||||||||||||||||!!.|||||||||||||||
         SerCysThr***ProProPheMetAlaArgMetSerAlaPheHisArgLeuValThrLys
 50382 : AGCTGCACCTGACCACCGTTCATGGCGCGCATGAGCGCCTTCCACCGCCTGGTCACCAAG : 50441

   161 : TyrGlnArgAspValAspPheLeuIleIleTyrIleGluGluAlaHisProSerAspGly :   180
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         TyrGlnArgAspValAspPheLeuIleIleTyrIleGluGluAlaHisProSerAspGly
 50442 : TACCAGCGCGACGTCGACTTCCTCATCATCTACATCGAGGAAGCTCACCCTTCGGACGGC : 50501

   181 : TrpValThrThrAspSerProTyrIleIleProGlnHisArgSerLeuGluAspArgVal :   200
         ||||||||||||||||||||||||! !|||||||||||||||||||||||||||||||||
         TrpValThrThrAspSerProTyrSerIleProGlnHisArgSerLeuGluAspArgVal
 50502 : TGGGTCACCACAGACTCCCCCTACAGCATCCCGCAGCACCGAAGCCTGGAGGACCGGGTC : 50561

   201 : SerAlaAlaArgValLeuGlnGlnGlyAlaProGlyCysAlaLeuValLeuAspThrMet :   220
         |||||||||!:!|||||||||||||||||||||.!!|||:!!||||||||||||||||||
         SerAlaAlaGlnValLeuGlnGlnGlyAlaProSerCysSerLeuValLeuAspThrMet
 50562 : AGCGCGGCACAGGTACTGCAGCAAGGAGCGCCCAGCTGCTCTCTTGTCCTCGACACCATG : 50621

   221 : AlaAsnSerSerSerSerAlaTyrGlyAlaTyrPheGluArgLeuTyrValIleGlnSer :   240
         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||!:!
         AlaAsnSerSerSerSerAlaTyrGlyAlaTyrPheGluArgLeuTyrValIleGlnAsn
 50622 : GCCAACTCCAGCAGCTCGGCCTATGGGGCCTACTTCGAGCGCCTCTACGTAATCCAGAAT : 50681

   241 : GlyThrIleMetTyrGlnGlyGlyArgGlyProAspGlyTyrGlnValSerGluLeuArg :   260
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         GlyThrIleMetTyrGlnGlyGlyArgGlyProAspGlyTyrGlnValSerGluLeuArg
 50682 : GGCACCATTATGTACCAGGGCGGCCGTGGCCCCGACGGCTACCAGGTGTCTGAGCTGCGC : 50741

   261 : ThrTrpLeuGluArgTyrAspGluGlnLeuHisGlyAlaArgProArgArgVal :   278
         |||||||||||||||||||||||||||||||||||||||!:!||||||||||||
         ThrTrpLeuGluArgTyrAspGluGlnLeuHisGlyAlaGlnProArgArgVal
 50742 : ACCTGGCTGGAGCGCTATGATGAGCAGCTGCACGGCGCTCAGCCGCGTCGAGTG : 50797

vulgar:  0 278 . KB228920.1:subseq(2149238,50797) 49963 50797 + 1413 M 278 834
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2015-11-26
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KB228920.1:subseq(2149238,50797)	exonerate:protein2genome:local	gene	49964	50797	1413	+	.	gene_id 1 ; sequence  ; gene_orientation .
KB228920.1:subseq(2149238,50797)	exonerate:protein2genome:local	cds	49964	50797	.	+	.	
KB228920.1:subseq(2149238,50797)	exonerate:protein2genome:local	exon	49964	50797	.	+	.	insertions 0 ; deletions 0
KB228920.1:subseq(2149238,50797)	exonerate:protein2genome:local	similarity	49964	50797	1413	+	.	alignment_id 1 ; Query  ; Align 49964 1 834
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis