
genewise output
Score 1680.19 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000054_2.0    1 MASEGPREPESE                       GIKLSADVKPFVPR 
                     MASEGPREPESE                       GIKLSADVKPFVPR 
                     MASEGPREPESE                       GIKLSADVKPFVPR 
KQ006137.1:subs28984 agtggccgcgagGTAAGGG  Intron 1   CAGgaattgggactgca 
                     tccagcgacaga<0-----[29020:30085]-0>gtatccatacttcg 
                     ggggggggcacg                       ccgaaatcaatcca 


SPP00000054_2.0   27 FAGLNVAWLESSEACVFPSSAATYYPFVQEPPVT                
                     FAGLNVAWLESSEACVFPSSAATYYPFVQEPPVT                
                     FAGLNVAWLESSEACVFPSSAATYYPFVQEPPVT                
KQ006137.1:subs30128 tggcaggttgttggtgtcatggattctgcgccga                
                     tcgtatcgtaccacgttcgccccaacttaacctc                
                     tcgctgagagcaaatcccctacactgttgaaagc                


SPP00000054_2.0   61                           QKIYTEDMAFGASTFPPQYLSSE 
                                               QKIYTEDMAFGASTFPPQYLSSE 
                                E:E[gag]       QKIYTEDMAFGASTFPPQYLSSE 
KQ006137.1:subs30230 GAGTATGTA  Intron 2   TAGGcaataggagtggtatcccttttg 
                       <2-----[30232:35257]-2> aatacaatctgccctccaatcca 
                                               gaattacgctatattatgtattg 


SPP00000054_2.0   85 ITLHPYAYSPYTLDSTQNVYSVPGSQYLYNQPSCYRGFQTVKHRNENTC 
                     ITLHPYAYSPYTLDSTQNVYSVPGSQY YN PSCYR FQTVKH+NEN C 
                     ITLHPYAYSPYTLDSTQNVYSVPGSQYHYNHPSCYRSFQTVKHQNENVC 
KQ006137.1:subs35328 aaccctgttctacgtacagttgcgtctctaccattcatcagaccagagt 
                     tctacacaccactaccaatactcgcaaaaaacggaggtactaaaaaatg 
                     atttatcttttctccagttcagtccgtttctcttcattaaggtatgcgc 


SPP00000054_2.0  134 PLPQEMKALFK                       KKTYDEKKTYDQQKF 
                     PLPQEMKALFK                       KKTYDEKKTYDQQKF 
                     PLPQEMKALFK                       KKTYDEKKTYDQQKF 
KQ006137.1:subs35475 ccccgaagctaGTGAGTA  Intron 3   CAGaaatggaaatgccat 
                     ctcaatactta<0-----[35508:35724]-0>aacaaaaacaaaaat 
                     tcaaagatgtg                       aacttgaagttgagt 


SPP00000054_2.0  160 DSERADGTISSEIKSARGSHHLSIYAENSLKS                  
                     DSER DGT+SSEIKSARGSHHLSIYAENSLKS                  
                     DSERTDGTMSSEIKSARGSHHLSIYAENSLKS                  
KQ006137.1:subs35770 gagaaggaattgaatgagtccttatggaatat                  
                     agagcagctccataccggcaatctacaagtac                  
                     ctaattatgacgaaatatattgctttgttgaa                  


SPP00000054_2.0  192                           GYHKRTDRKSRIIAKNVSTSKPE 
                                               GYHKRTDRKSRIIAKNVSTSKPE 
                               D:D[gat]        GYHKRTDRKSRIIAKNVSTSKPE 
KQ006137.1:subs35866 GGTAAAAA  Intron 4   CAGATgtcacagaataaagaagtatacg 
                      <1-----[35867:38531]-1>  gaaagcagacgttcaatcccaca 
                                               tctgaacgacactaatatccatg 


SPP00000054_2.0  216 FEFTTLDFPELQGAENNMSEIQKQPKWGPVHSVSTDISLLREVVKPAAV 
                     FEFTTLDFPELQGAENNMSEIQKQPKWGPVHS STDISLLREVVKPAAV 
                     FEFTTLDFPELQGAENNMSEIQKQPKWGPVHSSSTDISLLREVVKPAAV 
KQ006137.1:subs38603 tgtaacgtcgccgggaaatgacaccatgcgctttagatccagggacggg 
                     tatcctatcatagcaaatcataaacaggctaccccatcttgattaccct 
                     tatcagcttagatagctgagaggacggatcctcccctttaaaaaaatag 


SPP00000054_2.0  265 LSK                       GEIVVKNN-PNESVTANAATNSP 
                     LSK                       GEIVVKNN PNESVTANAATNSP 
                     LSK                       GEIVVKNNNPNESVTANAATNSP 
KQ006137.1:subs38750 ttaGTGAGGT  Intron 5   TAGggaggaaaacagtgagaggaatc 
                     tca<0-----[38759:43012]-0>gatttaaaacaactccacccacc 
                     aag                       taaggattcatatatttttcttt 


SPP00000054_2.0  290 SCTR                          LSWTPMGYVVRQTLSTELS 
                     SCTR                          LSWTPMGYVVRQTLSTELS 
                     SCTR          E:E[gag]        LSWTPMGYVVRQTLSTELS 
KQ006137.1:subs43082 ttaaGGTAAAAG  Intron 6   CAGAGtttacagtggccattagct 
                     cgcg <1-----[43095:44632]-1>  tcgcctgattgactccatc 
                     ataa                          atgaagttttagaataaga 


SPP00000054_2.0  314 AAPKNVTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQ 
                      APKNVTSMINLKTIASSADPKNVSIPSSEALSSD SYNKEKHI+HPTQ 
                     PAPKNVTSMINLKTIASSADPKNVSIPSSEALSSDRSYNKEKHIVHPTQ 
KQ006137.1:subs44692 cgcaagataaataaagttggcaagaacttggtttgcttaagacagccac 
                     cccaatccttatactccccacaatgtcccactccagcaaaaaattacca 
                     actattttgacagcttaaattatttaattatatgttcccaaacttttca 


SPP00000054_2.0  363 K                       SKASQGSDLEQNEASRKNKKKKEKS 
                     K                       SKASQGS+LEQNEASRK+KKKKEKS 
                     K                       SKASQGSELEQNEASRKSKKKKEKS 
KQ006137.1:subs44839 aGTACGTG  Intron 7   TAGtagtcgagcgcaggtaaaaaaagat 
                     a<0-----[44842:48566]-0>caccaggataaaaccgagaaaaaac 
                     g                       taaaatcataatacaagtgagaaat 


SPP00000054_2.0  389 TSKYEVLTVQEPPRIE                       DAEEFPNLAV 
                     TSKYEVLTVQEPPRIE                       DAEEFPNLAV 
                     TSKYEVLTVQEPPRIE                       DAEEFPNLAV 
KQ006137.1:subs48642 atatggcagcgccaagGTACATT  Intron 8   TAGggggtcacgg 
                     ccaaattctaaccgta<0-----[48690:49999]-0>acaatcatct 
                     aaatacgatagtagta                       tcgatccgat 


SPP00000054_2.0  415 ASERRDRIETPKFQSKQQPQ                       DNFKNN 
                     ASERRDRIETPKFQSKQQPQ                       DNF+NN 
                     ASERRDRIETPKFQSKQQPQ                       DNFRNN 
KQ006137.1:subs50030 gtgaagaagacatctaccccGTAATTT  Intron 9   CAGgataaa 
                     ccaggagtaccatacaaaca<0-----[50090:51708]-0>aatgaa 
                     ataaacaagagatataggag                       tctact 


SPP00000054_2.0  441 VKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVS            
                     VKKSQLPVQLDLGG+LTALEK+QHSQHAKQSS+PVVVS            
                     VKKSQLPVQLDLGGVLTALEKQQHSQHAKQSSRPVVVS            
KQ006137.1:subs51727 gaaacccgccgtgggcagcgaccctccgacttacgggt            
                     taagatctatatggttcctaaaaacaacaaccgctttc            
                     aggcgtagggtggcggacgagggctgtaggccaagaca            


SPP00000054_2.0  479                           GAVPVLSKECASGERGRRMSQMK 
                                               GAVPVLSKEC SGERGRR+SQMK 
                               V:V[gtt]        GAVPVLSKECTSGERGRRVSQMK 
KQ006137.1:subs51841 GGTAAGAT  Intron 10  CAGTTgggcgctagtatggagccgacaa 
                      <1-----[51842:57351]-1>  gctcttcaagccgaggggtgata 
                                               aagactcaatgaggacccgtagg 


SPP00000054_2.0  503 TPHNPLDSSAPLMKKGKQREIPKAKKPTSLKK                  
                     TPHNPLDSSAPLMKKGKQREIPKAKKPTSLKK                  
                     TPHNPLDSSAPLMKKGKQREIPKAKKPTSLKK                  
KQ006137.1:subs57423 accactgtagccaaagacagacagaacatcaa                  
                     ccaactacgccttaagaagatcacaaccctaa                  
                     cactcgccccggggaaggggccgcggacaggg                  


SPP00000054_2.0  535                        IILKERQERK-QRLQENAVSPAFTSD 
                                            IILKERQERK QRLQENAVSPAFTSD 
                                            IILKERQERKQQRLQENAVSPAFTSD 
KQ006137.1:subs57519 GTGTGTG  Intron 11  AAGaatagccgaacccccgaggacgtaag 
                     <0-----[57519:58541]-0>tttaagaagaaagtaaactgcctcga 
                                            ttgaagagagggtcaattgtattctt 


SPP00000054_2.0  560 DTQDGESGGDDQFPEQAELS                          PEG 
                     DTQDGESGGDDQ PEQAE S                          PEG 
                     DTQDGESGGDDQVPEQAEPS          G:G[ggg]        PEG 
KQ006137.1:subs58620 gacgggaggggcgcgcggctGGTACCAA  Intron 12  AAGGGcgg 
                     acaagagggaaatcaacacc <1-----[58681:60246]-1>  cag 
                     caatagttttcgttggagca                          agg 


SPP00000054_2.0  584 MDELISTPSVEDKSEEPPGTELQRDTEASHLAPNHTTFPKIHSRRFR   
                     MDE ISTP++E KSEEPPGTELQRDTEASHLAPNHTTFPKIHSRRFR   
                     MDEPISTPAIEGKSEEPPGTELQRDTEASHLAPNHTTFPKIHSRRFR   
KQ006137.1:subs60258 aggcatacgaggatggccgagccagaggtccgcacaatcaacacata   
                     taactcccctagacaaccgcatagacaccatccaacctcatagggtg   
                     gcagccttgtgcgtagaacaacggcagcccttctcccctgccccacg   


SPP00000054_2.0  631                           YCSQMLSKEVDACVTDLLKELVR 
                                               YCSQMLSKEVDACVTDLLKELVR 
                                D:D[gat]       YCSQMLSKEVDACVTDLLKELVR 
KQ006137.1:subs60399 GAGTGAGTG  Intron 13  CAGTttacacaaggggtgagccagcgc 
                       <2-----[60401:61106]-2> aggattgaatacgtcattaattg 
                                               cccggttaagttttccacaagct 


SPP00000054_2.0  655 FQDRMYQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCVIISPNCEKIQS 
                     FQDRMYQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCVIISPNCEKIQS 
                     FQDRMYQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCVIISPNCEKIQS 
KQ006137.1:subs61177 tcgcatcagcgagaaacccgtgtaggcaccacaacatgaatcatgaact 
                     taagtaaaactacacaggtttgtgattaatataatagtttccagaatac 
                     cactgcgatacgcgtatatgggggatcacggcaagatctttcctagaga 


SPP00000054_2.0  704 K                          GLDDTLHTIIDYACEQNIPFVF 
                     K                          GLDDTLHTIIDYACEQNIPFVF 
                     K          G:G[ggt]        GLDDTLHTIIDYACEQNIPFVF 
KQ006137.1:subs61324 aGGTAAAGG  Intron 14  CAGGTgcggatcaaagtgtgcaactgt 
                     a <1-----[61328:68179]-1>  gtaactacttaacgaaatcttt 
                     a                          ggtctgcattttctggctctgt 


SPP00000054_2.0  728 ALNRKALGRSLNKAVPVSVVGIFSYDGAQ                     
                     ALNRKALGRSLNKAVPVSVVGIFSYDGAQ                     
                     ALNRKALGRSLNKAVPVSVVGIFSYDGAQ                     
KQ006137.1:subs68248 gcacagcgcataaggcgagggatatgggcGTGAGCG  Intron 15   
                     ctagactgggtaactctgttgttgaagca<0-----[68335:68766] 
                     tcccatggctgtgattccgagcccctgcg                     


SPP00000054_2.0  757    DQFHKMVELTVAARQAYKTMLENVQQELVGEPRPQAPPSLPTQGPS 
                        DQFHKMVELT+AARQAYKTMLENVQQEL GEPRPQAPP  PTQGPS 
                        DQFHKMVELTMAARQAYKTMLENVQQELAGEPRPQAPPRPPTQGPS 
KQ006137.1:subs68764 AAGgctcaaggcaaggccgtaaacgagccgcgggcaccgccaccacgca 
                     -0>aataattatctccgacaacttaataaatcgacgcacccgcccagcg 
                        tgccggtggaggcaggcgcgggtggggggaacgtgatcggcagccc 


SPP00000054_2.0  803 CPAEDGPPALKEKEEPHY                          EIWKK 
                     CPAEDGPPAL EKEEPHY                          EIWKK 
                     CPAEDGPPALTEKEEPHY          I:I[att]        EIWKK 
KQ006137.1:subs68905 tcggggccgcagaggcctAGTGAGTG  Intron 16  TAGTTgataa 
                     gccaagccctcaaaacaa <1-----[68960:69504]-1>  atgaa 
                     ctaatccacgaaaagacc                          acgaa 


SPP00000054_2.0  827 HLEAYSGCTLELEESLEASTSQMMNLNL                      
                     HLEAYS C LELEESLEASTSQMMNLNL                      
                     HLEAYSPCALELEESLEASTSQMMNLNL                      
KQ006137.1:subs69522 ccggtactgcgcggttggtatcaaatat                      
                     atacagcgctataactaccccattatat                      
                     tgaactatcggagacggtactaggtgta                      


//
Making a E in phase 2 intron
Making a D in phase 1 intron
Making a E in phase 1 intron
Making a V in phase 1 intron
Making a G in phase 1 intron
Making a D in phase 2 intron
Making a G in phase 1 intron
Making a I in phase 1 intron
>KQ006137.1:subseq(19767419,100098).pep
MASEGPREPESEGIKLSADVKPFVPRFAGLNVAWLESSEACVFPSSAATYYPFVQEPPVT
EQKIYTEDMAFGASTFPPQYLSSEITLHPYAYSPYTLDSTQNVYSVPGSQYHYNHPSCYR
SFQTVKHQNENVCPLPQEMKALFKKKTYDEKKTYDQQKFDSERTDGTMSSEIKSARGSHH
LSIYAENSLKSDGYHKRTDRKSRIIAKNVSTSKPEFEFTTLDFPELQGAENNMSEIQKQP
KWGPVHSSSTDISLLREVVKPAAVLSKGEIVVKNNNPNESVTANAATNSPSCTRELSWTP
MGYVVRQTLSTELSPAPKNVTSMINLKTIASSADPKNVSIPSSEALSSDRSYNKEKHIVH
PTQKSKASQGSELEQNEASRKSKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERR
DRIETPKFQSKQQPQDNFRNNVKKSQLPVQLDLGGVLTALEKQQHSQHAKQSSRPVVVSV
GAVPVLSKECTSGERGRRVSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKE
RQERKQQRLQENAVSPAFTSDDTQDGESGGDDQVPEQAEPSGPEGMDEPISTPAIEGKSE
EPPGTELQRDTEASHLAPNHTTFPKIHSRRFRDYCSQMLSKEVDACVTDLLKELVRFQDR
MYQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCVIISPNCEKIQSKGGLDDTLHTIIDYA
CEQNIPFVFALNRKALGRSLNKAVPVSVVGIFSYDGAQDQFHKMVELTMAARQAYKTMLE
NVQQELAGEPRPQAPPRPPTQGPSCPAEDGPPALTEKEEPHYIEIWKKHLEAYSPCALEL
EESLEASTSQMMNLNL
//
>KQ006137.1:subseq(19767419,100098).[28984:69605].sp
ATGGCGTCGGAGGGGCCGCGGGAGCCCGAAAGCGAGGGCATCAAGTTATCAGCAGATGTC
AAACCATTTGTCCCCAGATTTGCCGGGCTCAATGTGGCATGGTTAGAGTCCTCAGAAGCA
TGTGTCTTCCCCAGCTCTGCAGCCACATACTATCCGTTTGTTCAGGAACCACCAGTGACC
GAGCAGAAAATATATACTGAAGACATGGCCTTTGGAGCTTCAACTTTTCCACCTCAGTAT
TTATCTTCTGAGATAACTCTTCATCCATATGCCTATTCTCCTTATACCCTTGACTCCACA
CAGAATGTTTACTCAGTGCCTGGCTCCCAGTATCATTATAACCATCCCAGTTGTTACCGA
AGTTTTCAAACAGTGAAGCATCAAAATGAGAACGTGTGCCCTCTCCCACAAGAAATGAAA
GCTCTGTTTAAGAAAAAAACCTATGATGAGAAAAAAACGTATGATCAGCAAAAGTTTGAC
AGTGAAAGAACTGATGGAACTATGTCATCCGAGATAAAATCAGCTAGAGGTTCACATCAT
TTGTCCATTTATGCTGAGAATAGTTTGAAATCAGATGGTTACCATAAGCGAACAGACAGG
AAATCCAGAATCATTGCAAAAAATGTATCTACCTCCAAACCTGAGTTTGAATTTACCACA
CTGGACTTTCCTGAACTGCAAGGTGCAGAGAACAATATGTCAGAGATACAGAAGCAACCC
AAGTGGGGACCTGTCCACTCTTCCTCCACCGACATTTCTCTTCTAAGAGAAGTAGTAAAA
CCAGCTGCAGTGTTATCAAAGGGTGAAATAGTGGTGAAAAATAATAACCCAAATGAATCT
GTAACTGCTAATGCTGCTACCAATTCTCCTTCATGTACAAGAGAGTTATCTTGGACACCA
ATGGGTTATGTTGTTCGACAGACATTATCTACAGAACTGTCACCAGCCCCTAAAAATGTT
ACTTCTATGATAAACTTAAAGACCATTGCTTCATCAGCAGATCCTAAAAATGTTAGTATA
CCATCTTCTGAAGCTTTATCTTCGGATCGTTCCTACAACAAAGAAAAACACATTGTTCAT
CCTACCCAAAAGTCTAAAGCATCACAAGGTAGCGAACTTGAACAAAATGAAGCCTCAAGA
AAGAGTAAGAAAAAGAAAGAAAAATCTACATCAAAATATGAAGTCCTGACAGTTCAAGAG
CCTCCAAGGATTGAAGATGCCGAGGAATTTCCCAACCTGGCAGTTGCATCTGAAAGAAGA
GACAGAATAGAGACACCGAAATTTCAATCTAAACAGCAGCCACAGGATAACTTTAGAAAC
AATGTAAAGAAGAGCCAGCTTCCAGTGCAGCTGGATTTGGGGGGCGTGCTGACAGCCCTG
GAAAAGCAGCAGCACTCTCAGCATGCAAAGCAGTCCTCCAGACCAGTGGTAGTCTCAGTT
GGAGCAGTGCCAGTCCTTTCCAAAGAATGTACGTCAGGGGAGAGAGGCCGCCGCGTGAGT
CAAATGAAGACCCCACACAATCCCTTGGACTCCAGCGCCCCGCTGATGAAGAAAGGAAAG
CAGAGGGAGATCCCCAAGGCCAAGAAGCCAACCTCACTGAAGAAGATTATTTTGAAAGAA
CGGCAAGAGAGAAAGCAGCAGCGTCTCCAAGAAAATGCTGTGAGTCCAGCTTTTACCAGT
GATGACACACAAGATGGAGAGAGTGGTGGTGATGACCAGGTTCCTGAGCAGGCAGAGCCC
TCAGGGCCAGAGGGGATGGACGAACCGATCTCCACTCCTGCGATTGAGGGCAAGTCTGAA
GAGCCACCAGGCACAGAACTCCAGAGGGACACAGAGGCCTCCCACCTTGCTCCCAATCAC
ACCACCTTCCCTAAGATCCACAGCCGCAGATTCAGGGATTACTGCAGCCAGATGCTTAGT
AAAGAAGTGGATGCTTGTGTTACCGACCTACTCAAAGAACTGGTCCGTTTCCAAGACCGT
ATGTACCAGAAAGATCCAGTCAAGGCCAAGACTAAACGTCGACTTGTGTTGGGGTTGAGG
GAAGTTCTCAAACACCTGAAGCTCAAAAAACTGAAATGTGTCATTATTTCTCCCAACTGT
GAAAAGATACAGTCAAAAGGTGGGCTGGATGACACTTTGCACACAATTATTGATTATGCC
TGTGAGCAGAACATTCCCTTTGTGTTTGCTCTCAACCGCAAAGCTCTGGGGCGCAGTTTG
AATAAGGCAGTTCCTGTCAGCGTGGTAGGGATCTTCAGCTACGATGGGGCCCAGGATCAG
TTCCACAAGATGGTTGAGCTGACAATGGCGGCCCGACAGGCGTACAAGACCATGCTGGAG
AATGTGCAGCAGGAGCTGGCGGGAGAACCCAGGCCTCAGGCACCTCCCAGGCCGCCCACA
CAGGGCCCCAGCTGCCCTGCAGAAGATGGCCCCCCAGCCCTGACAGAAAAAGAAGAGCCA
CACTACATTGAAATCTGGAAAAAACATCTGGAAGCATACAGTCCATGTGCCCTGGAGCTA
GAGGAATCCTTGGAGGCTTCAACCTCTCAAATGATGAATTTGAATTTA
//
KQ006137.1:subseq(19767419,100098)	GeneWise	match	28984	69605	1680.19	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	28984	29019	0.00	+	0	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	29020	30085	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	30086	30231	0.00	+	0	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	30232	35257	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	35258	35507	0.00	+	1	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	35508	35724	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	35725	35866	0.00	+	0	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	35867	38531	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	38532	38758	0.00	+	2	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	38759	43012	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	43013	43094	0.00	+	0	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	43095	44632	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	44633	44841	0.00	+	2	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	44842	48566	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	48567	48689	0.00	+	0	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	48690	49999	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	50000	50089	0.00	+	0	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	50090	51708	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	51709	51841	0.00	+	0	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	51842	57351	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	57352	57518	0.00	+	2	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	57519	58541	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	58542	58680	0.00	+	0	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	58681	60246	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	60247	60400	0.00	+	2	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	60401	61106	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	61107	61327	0.00	+	1	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	61328	68179	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	68180	68334	0.00	+	2	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	68335	68766	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	68767	68959	0.00	+	0	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	intron	68960	69504	0.00	+	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	69505	69605	0.00	+	2	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
//

genewise output
Score 22.51 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000054_2.0  793 PPSLPTQGPSCPAEDG                                  
                     PP   TQGP CP++ G                                  
                     PPLSCTQGPRCPSKGG                                  
KQ006137.1:sub-83186 cctttacgcctctagg                                  
                     cctcgcagcggccagg                                  
                     acgcccggtccacgag                                  


//
>KQ006137.1:subseq(19767419,100098).pep
PPLSCTQGPRCPSKGG
//
>KQ006137.1:subseq(19767419,100098).[83186:83137].sp
CCACCCTTGTCCTGCACCCAGGGGCCTCGCTGCCCATCCAAGGGAGGG
//
KQ006137.1:subseq(19767419,100098)	GeneWise	match	83186	83139	22.51	-	.	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
KQ006137.1:subseq(19767419,100098)	GeneWise	cds	83186	83139	0.00	-	0	KQ006137.1:subseq(19767419,100098)-genewise-prediction-1
//
