
genewise output
Score 468.60 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000114_2.0    1 MAAPAPVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPVLDARGQRVPF 
                     MAAPA VTRQVSG AA VPAPSGP+ GQPLA A+AELPVLDAR QRVPF 
                     MAAPARVTRQVSGGAAPVPAPSGPNRGQPLATALAELPVLDARRQRVPF 
KQ009171.1:subs50000 aggcgcgaccgaggggcgcgcagcacgcccgagtggccgcggcaccgct 
                     tccccgtcgatgggccctcccggcaggactccctcatcttacggagtct 
                     gcgtcgcaggtcccccgcgcgccaccggtgaccgcgggggcccgggagc 


SPP00000114_2.0   50 GALFRERRAVVVFVRHFLCYICKEYVEDLAKIPRSFLQEANVTLIVIGQ 
                     GALFRERRAVVVFVRHFLCYICKEYVEDLAKIP SFLQEANVTLIVIGQ 
                     GALFRERRAVVVFVRHFLCYICKEYVEDLAKIPESFLQEANVTLIVIGQ 
KQ009171.1:subs50147 ggctcgccggggtgcctcttatagtgggcgaacgattcggagacagagc 
                     gcttgaggctttttgattgatgaaataatcatcagttaacatcttttga 
                     cggcggcccgggcggtcgtcccgacagtgcaccgtcaaaatcctagtag 


SPP00000114_2.0   99 SSYHHIEPFCKLTGYSHEIYVDPEREIYKRLGMKRGEEIASSGQSPHIK 
                     SSYHHIEPFCK TGYSHEIYVDPERE+YKRLGMKRGEEIA+S QSPHIK 
                     SSYHHIEPFCKPTGYSHEIYVDPEREMYKRLGMKRGEEIAASRQSPHIK 
KQ009171.1:subs50294 tttccagcttacagttcgatggcgagataatgaaagggaggtccaccaa 
                     ccaaatactgaccgacaatatacagataagtgtaggaatcccgagcata 
                     acctttgttcagtatttactcttgaagtaagagaataatccaagcccaa 


SPP00000114_2.0  148 SNLLSGSLQSLWRAVTGPLFDFQGDPAQQGGTLILGPGNNIHFIHRDRN 
                     SNLLSGSLQSLWRAVTGP FDFQGDPAQQGG LI GP  +IHFIH DRN 
                     SNLLSGSLQSLWRAVTGPQFDFQGDPAQQGGILIXGP-VDIHFIHCDRN 
KQ009171.1:subs50441 tacctgaccactcggagcctgtcggcgccggacatgc ggactactgaa 
                     cattcggtagtggctcgcatatagaccaaggtttggc tatattagaga 
                     atgcaactgcgggagtctgtttaacatgatacctata tccttacctgt 


SPP00000114_2.0  197 RLDHKPINSVLQLVGVQHVNFTNRPSVIHV                    
                     RLDHKPINSVLQLVGVQHVNFTNR SVIHV                    
                     RLDHKPINSVLQLVGVQHVNFTNRTSVIHV                    
KQ009171.1:subs50585 atgcacaatgtccgggccgataaaatgacg                    
                     gtaaactacttattgtaatatcagccttat                    
                     ggtcatccttagtaatgtgctacatatctg                    


//
>KQ009171.1:subseq(4788055,100674).pep
MAAPARVTRQVSGGAAPVPAPSGPNRGQPLATALAELPVLDARRQRVPFGALFRERRAVV
VFVRHFLCYICKEYVEDLAKIPESFLQEANVTLIVIGQSSYHHIEPFCKPTGYSHEIYVD
PEREMYKRLGMKRGEEIAASRQSPHIKSNLLSGSLQSLWRAVTGPQFDFQGDPAQQGGIL
IXGPVDIHFIHCDRNRLDHKPINSVLQLVGVQHVNFTNRTSVIHV
//
>KQ009171.1:subseq(4788055,100674).[50000:50674].sp
ATGGCCGCGCCTGCCCGGGTCACACGGCAGGTTAGCGGCGGCGCCGCCCCGGTCCCGGCC
CCGAGCGGCCCAAACCGCGGGCAGCCTCTGGCAACCGCCTTGGCCGAGCTGCCGGTGCTG
GACGCCCGCAGGCAGCGGGTACCGTTCGGCGCGCTGTTCCGGGAGCGCCGCGCCGTGGTG
GTGTTCGTGCGGCATTTCCTGTGTTACATCTGCAAGGAATACGTAGAGGATCTGGCCAAA
ATCCCCGAGAGTTTCTTACAAGAAGCAAATGTCACCCTTATAGTGATTGGACAGTCATCC
TACCATCATATTGAGCCTTTTTGCAAACCGACTGGATATTCTCATGAAATCTATGTCGAT
CCTGAGAGAGAAATGTATAAAAGATTGGGAATGAAAAGAGGTGAAGAAATTGCCGCCTCA
CGACAGAGCCCCCACATAAAATCAAATCTGCTCTCAGGAAGCCTTCAGAGCCTGTGGCGG
GCAGTGACTGGCCCTCAGTTTGATTTTCAAGGAGACCCAGCTCAGCAAGGTGGAATCCTC
ATTTGAGGTCCAGTTGACATCCATTTTATACACTGCGATAGGAATAGGTTGGATCACAAA
CCTATCAACTCTGTTTTACAGCTTGTAGGAGTTCAGCATGTGAACTTTACAAACAGAACT
TCAGTTATCCATGTG
//
KQ009171.1:subseq(4788055,100674)	GeneWise	match	50000	50674	468.60	+	.	KQ009171.1:subseq(4788055,100674)-genewise-prediction-1
KQ009171.1:subseq(4788055,100674)	GeneWise	cds	50000	50674	0.00	+	0	KQ009171.1:subseq(4788055,100674)-genewise-prediction-1
//

genewise output
Score 20.91 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000114_2.0   62 FVRHFLCYICKE                                      
                     FV++FL YIC E                                      
                     FVKYFLFYICGE                                      
KQ009171.1:sub-22529 tgattcttatgg                                      
                     ttaatttatgga                                      
                     tcactctccctg                                      


//
>KQ009171.1:subseq(4788055,100674).pep
FVKYFLFYICGE
//
>KQ009171.1:subseq(4788055,100674).[22529:22492].sp
TTTGTCAAATACTTTCTCTTTTACATCTGCGGTGAG
//
KQ009171.1:subseq(4788055,100674)	GeneWise	match	22529	22494	20.91	-	.	KQ009171.1:subseq(4788055,100674)-genewise-prediction-1
KQ009171.1:subseq(4788055,100674)	GeneWise	cds	22529	22494	0.00	-	0	KQ009171.1:subseq(4788055,100674)-genewise-prediction-1
//
