
genewise output
Score 17.65 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000017_2.0   19 FSARPLAGGEP                                       
                     FS +P  GGEP                                       
                     FSPQPTEGGEP                                       
KQ009282.1:subs29223 ttcccaggggc                                       
                     tccaccaggac                                       
                     tgtactgcaga                                       


//
>KQ009282.1:subseq(20035667,100188).pep
FSPQPTEGGEP
//
>KQ009282.1:subseq(20035667,100188).[29223:29255].sp
TTTTCGCCTCAACCCACTGAGGGCGGAGAGCCA
//
KQ009282.1:subseq(20035667,100188)	GeneWise	match	29223	29255	17.65	+	.	KQ009282.1:subseq(20035667,100188)-genewise-prediction-1
KQ009282.1:subseq(20035667,100188)	GeneWise	cds	29223	29255	0.00	+	0	KQ009282.1:subseq(20035667,100188)-genewise-prediction-1
//

genewise output
Score 430.46 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000017_2.0    1 MCAARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLX 
                     MCAARLAAAA     VYAFSARPLAGGEPVSLGSLRGKVLLIENVASLX 
                     MCAARLAAAA-----VYAFSARPLAGGEPVSLGSLRGKVLLIENVASLX 
KQ009282.1:sub-50236 atggccgggg     gtgttgcccggggcgacgtcagagccagaggtct 
                     tgccgtcccc     tactccgctcggactgtgctggattttaatcctg 
                     gtttgaggag     gcccggcggccggtgcgccagcggatcgtggcca 


SPP00000017_2.0   50 GTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQ               
                     GTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQ               
                     GTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQ               
KQ009282.1:sub-50104 gaagcgtacaagcccccgccgcggcgtctactgcc               
                     gcctgaacataataggtgcggttttgtcgaatgaa               
                     ccgcgcccggcggggctgcgcgggcccgccgtgtg               


SPP00000017_2.0   85                        ENAKNEEILNSLKYVRPGGGFEPNFM 
                                            ENAKNEEILNSLKYVRPGGGFEPNFM 
                                            ENAKNEEILNSLKYVRPGGGFEPNFM 
KQ009282.1:sub-49999 GTGCGCC  Intron 1   TAGgagaaggacatcatgccgggtgcata 
                     <0-----[49999:49750]-0>aacaaaattactaatgcgggtacatt 
                                            gccgcagtgtccgccatttgcgcccg 


SPP00000017_2.0  111 LFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRND 
                     LFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRND 
                     LFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRND 
KQ009282.1:sub-49671 ctgatggaggggccctgtccggccgcagggagcaagcacaattcgtcag 
                     ttaagatagcgcacttcttgactcccgaacccttcacattcgcctggaa 
                     ccggcggctaggctccccgggcgacccctctgcgcccgcccgtggccct 


SPP00000017_2.0  160 VAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLSQGPSCA      
                     VAWNFEKFLVGPDGVP+RRYSRRFQTIDIEPDIEALLSQGPS A      
                     VAWNFEKFLVGPDGVPVRRYSRRFQTIDIEPDIEALLSQGPSSA      
KQ009282.1:sub-49524 ggtatgatcggcgggcgcatacctcaagagcgaggcctcgcaag      
                     tcgataatttgcagtctggagggtactatacatacttcagcggc      
                     tcgccggcggctctgcacgcccccgctccgtccacggtatcctc      


//
>KQ009282.1:subseq(20035667,100188).pep
MCAARLAAAAVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRR
LGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPL
FAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPVRRYSRRFQT
IDIEPDIEALLSQGPSSA
//
>KQ009282.1:subseq(20035667,100188).[50236:49391].sp
ATGTGTGCTGCTCGGCTAGCGGCGGCAGCGGTGTACGCCTTCTCGGCGCGCCCGCTGGCC
GGCGGGGAGCCTGTGAGCCTGGGCTCCCTAAGGGGCAAGGTGCTACTTATCGAGAATGTG
GCGTCCCTCTGAGGCACCACGGTCCGGGACTACACCCAGATGAACGAGCTGCAGCGGCGC
CTTGGGCCCCGGGGCCTGGTGGTGCTCGGCTTCCCGTGCAACCAGTTTGGGCATCAGGAG
AACGCCAAGAACGAAGAGATTCTGAATTCCCTCAAGTACGTCCGACCTGGTGGTGGGTTC
GAGCCCAACTTCATGCTCTTCGAGAAGTGCGAGGTGAACGGTGCAGGGGCGCACCCTCTC
TTCGCCTTCCTGCGGGAGGCCCTGCCAGCCCCCAGCGACGATGCCACTGCGCTCATGACC
GACCCCAAGCTCATCACCTGGTCTCCGGTGTGCCGCAACGATGTTGCCTGGAACTTCGAG
AAGTTCCTGGTGGGCCCTGACGGTGTGCCCGTACGCAGGTACAGCCGCCGCTTCCAGACC
ATTGACATCGAGCCTGACATCGAAGCCCTGCTGTCTCAAGGTCCCAGCAGTGCC
//
KQ009282.1:subseq(20035667,100188)	GeneWise	match	50236	49393	434.45	-	.	KQ009282.1:subseq(20035667,100188)-genewise-prediction-1
KQ009282.1:subseq(20035667,100188)	GeneWise	cds	50236	50000	0.00	-	0	KQ009282.1:subseq(20035667,100188)-genewise-prediction-1
KQ009282.1:subseq(20035667,100188)	GeneWise	intron	49999	49750	0.00	-	.	KQ009282.1:subseq(20035667,100188)-genewise-prediction-1
KQ009282.1:subseq(20035667,100188)	GeneWise	cds	49749	49393	0.00	-	0	KQ009282.1:subseq(20035667,100188)-genewise-prediction-1
//
