
genewise output
Score 603.97 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000008_2.0    1 MGILSVDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRG 
                     MGILSVDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRG 
                     MGILSVDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRG 
KQ005747.1:subs50000 agacaggtcaaccaccgtttatctcgctgtgaccacggcctactatacg 
                     tgttgtatttctattctttcagtttctaacttttaatttttggcaccgg 
                     gccccacggcagatgattccccccggctcgctgcgcgggggcccgctca 


SPP00000008_2.0   50 EWRRMLTSEGLRCVWKSFLLDAYKQ                       V 
                     EWRRMLTSEGLRCVWKSFLLDAYKQ                       V 
                     EWRRMLTSEGLRCVWKSFLLDAYKQ                       V 
KQ005747.1:subs50147 gtccacatggcctgtaatccggtacGTGAGCT  Intron 1   CAGg 
                     agggttccagtggtgagtttacaaa<0-----[50222:58179]-0>t 
                     gggcggcagagcccggcccctccag                       g 


SPP00000008_2.0   76 KLGEDAPNSSVVHVSSTEGGDNSGNGTQEKIAEGATCHLLDFASPERPL 
                     KLGEDAPNSSVVHVSS EGGDNSG+GTQEKIAEGA CHLLDFASPERPL 
                     KLGEDAPNSSVVHVSSAEGGDNSGHGTQEKIAEGAACHLLDFASPERPL 
KQ005747.1:subs58183 atggggcataggcgtagggggaagcgacgaagggggtcccgtgacgccc 
                     atgaaccacgttatcgcaggaaggagcaaatcagccgattatcgcagct 
                     agtgtcctctggtcctaaatcctcctcgggatgaccccctcttctgcaa 


SPP00000008_2.0  125 VVNFGSATXPPFTSQLPAFRKLVEEFSSVADFLLVYIDEAHPSDGWAIP 
                     VVNFGSATXPPFTSQLPAFRKLVEEFSSVADFLLVYIDEAHPSDGWAIP 
                     VVNFGSATXPPFTSQLPAFRKLVEEFSSVADFLLVYIDEAHPSDGWAIP 
KQ005747.1:subs58330 ggatgtgatcctaacccgtcacgggtttgggtccgtagggcctggtgac 
                     ttatgcccgcctcgatcctgattaatcctcattttataacaccaggctc 
                     gccttactattcgcggacccaggagccagcccggccttgttaaccggat 


SPP00000008_2.0  174 GDSSLSFEVKKHQNQEDRCAAAQQLLERFSLPPQCRVVADRMDNNANIA 
                     GDSSLSFEVKKHQNQEDRCAAAQQLLERFSLPPQCRVVADRMDNNANIA 
                     GDSSLSFEVKKHQNQEDRCAAAQQLLERFSLPPQCRVVADRMDNNANIA 
KQ005747.1:subs58477 ggtttttggaaccacggctgggccccgctttccctcggggcagaagaag 
                     gacctctataaaaaaaaggcccaattagtctccaggttcagtaaacatc 
                     gcctgttggggcgcgatataacggtggtccggcgcatgtccgctcccat 


SPP00000008_2.0  223 YGVAFERVCIVQRQKIAYLGGKGPFSYNLQEVRHWLEKNFSKR       
                     YGVAFERVCIVQRQKIAYLGGKGPFSYNLQEVRHWLEKNFSKR       
                     YGVAFERVCIVQRQKIAYLGGKGPFSYNLQEVRHWLEKNFSKR       
KQ005747.1:subs58624 tgggtgcgtagcacaagtcggagctttaccggcctcgaataaa       
                     agtctagtgttagaatcatggagctcaataatgagtaaatgag       
                     cgactatgctggagaattgaagcccccctaacgtggggtccga       


//
>KQ005747.1:subseq(440100,100224).pep
MGILSVDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRGEWRRMLTSEGL
RCVWKSFLLDAYKQVKLGEDAPNSSVVHVSSAEGGDNSGHGTQEKIAEGAACHLLDFASP
ERPLVVNFGSATXPPFTSQLPAFRKLVEEFSSVADFLLVYIDEAHPSDGWAIPGDSSLSF
EVKKHQNQEDRCAAAQQLLERFSLPPQCRVVADRMDNNANIAYGVAFERVCIVQRQKIAY
LGGKGPFSYNLQEVRHWLEKNFSKR
//
>KQ005747.1:subseq(440100,100224).[50000:58752].sp
ATGGGCATCCTCAGCGTAGACTTGCTGATCACACTGCAAATTCTGCCAGTTTTTTTCTCC
AACTGCCTCTTCCTGGCGCTCTATGACTCGGTCATTCTGCTCAAGCACGTGGTGCTGCTG
TTGAGCCGCTCCAAGTCCACTCGCGGAGAGTGGCGGCGCATGCTGACCTCAGAGGGACTG
CGCTGCGTCTGGAAGAGCTTCCTCCTCGATGCCTACAAACAGGTGAAATTGGGTGAGGAT
GCCCCCAATTCCAGTGTGGTGCATGTCTCCAGTGCAGAAGGAGGTGACAACAGTGGCCAC
GGTACCCAGGAGAAGATAGCTGAGGGAGCCGCCTGCCACCTCCTTGACTTTGCTAGCCCT
GAGCGCCCACTAGTGGTCAACTTTGGTTCAGCCACTTGACCTCCTTTCACGAGCCAGCTG
CCAGCCTTCCGCAAACTGGTGGAAGAGTTCTCCTCAGTGGCCGACTTCCTGCTGGTCTAC
ATTGATGAGGCTCATCCATCAGACGGCTGGGCGATACCTGGGGACTCCTCTTTGTCTTTT
GAGGTGAAGAAGCACCAGAACCAGGAAGATCGATGTGCAGCAGCCCAGCAGCTTCTGGAG
CGTTTCTCCTTGCCGCCCCAGTGCCGAGTTGTGGCTGACCGCATGGACAATAACGCCAAC
ATAGCTTACGGGGTAGCCTTTGAACGTGTGTGCATTGTGCAGAGACAGAAAATAGCTTAT
CTGGGAGGAAAGGGCCCCTTCTCCTACAACCTTCAAGAAGTCCGGCATTGGCTGGAGAAG
AATTTCAGCAAGAGA
//
KQ005747.1:subseq(440100,100224)	GeneWise	match	50000	58752	603.97	+	.	KQ005747.1:subseq(440100,100224)-genewise-prediction-1
KQ005747.1:subseq(440100,100224)	GeneWise	cds	50000	50221	0.00	+	0	KQ005747.1:subseq(440100,100224)-genewise-prediction-1
KQ005747.1:subseq(440100,100224)	GeneWise	intron	50222	58179	0.00	+	.	KQ005747.1:subseq(440100,100224)-genewise-prediction-1
KQ005747.1:subseq(440100,100224)	GeneWise	cds	58180	58752	0.00	+	0	KQ005747.1:subseq(440100,100224)-genewise-prediction-1
//

genewise output
Score 19.29 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000008_2.0    4 LSVDLLITLQILPVF                                   
                     L+ D+ +TLQ LP F                                   
                     LTQDISLTLQSLPAF                                   
KQ005747.1:sub-74058 cacgattatcttcgt                                   
                     tcaatctctactcct                                   
                     ccgccaacaacgtat                                   


//
>KQ005747.1:subseq(440100,100224).pep
LTQDISLTLQSLPAF
//
>KQ005747.1:subseq(440100,100224).[74058:74012].sp
CTCACCCAGGACATCTCATTAACCTTACAATCCTTGCCTGCATTT
//
KQ005747.1:subseq(440100,100224)	GeneWise	match	74058	74014	19.29	-	.	KQ005747.1:subseq(440100,100224)-genewise-prediction-1
KQ005747.1:subseq(440100,100224)	GeneWise	cds	74058	74014	0.00	-	0	KQ005747.1:subseq(440100,100224)-genewise-prediction-1
//
