genewise output Score 1168.14 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000129_2.0 1 MGCAEGKAVAAAAPTELQTKGKNGDGRRRS MGCAEGKAVA AAP EL TKGKNG GRRRS MGCAEGKAVAVAAPPELHTKGKNGGGRRRS KN979385.1:subs 2393 agtgggaggggggccgccaagaagggccat tggcagactctccccatacagaaggggggc gccggcggggaccagggccacgcttcctga SPP00000129_2.0 31 KDHHPGKTLPENPAGFTSTATAD KDHHPGKTLPENP GFTSTAT D A:A[gct] KDHHPGKTLPENPTGFTSTATTD KN979385.1:subs 2483 GGTACGAC Intron 1 TAGCTagcccgaatcgacagtaaagaag <1-----[2484 :50000]-1> aaaacgactcaaccgtcgcccca attcttatgagcaaacccgctac SPP00000129_2.0 55 SRALLQAYIDGHSVVIFSRSTCTRCTE RALLQAYIDGHSVVIFSRSTCTRC E LRALLQAYIDGHSVVIFSRSTCTRCAE KN979385.1:subs50072 cagcccgtaggctggataatatactggGTAAGGC Intron 2 tgcttacatagacttttggccgcggca<0-----[50153:56338] cacgtgctactctgccctgcacacttg SPP00000129_2.0 82 VKKLFKSLCVPYFVLELDQT VKKLFKSLCVPYFVLELDQT VKKLFKSLCVPYFVLELDQT E:A[gcc] KN979385.1:subs56336 CAGgaattatctgcttgcgcgcaGGTAAGTT Intron 3 TAGCC -0>taattactgtcatttataac <1-----[56400:90322]-1> aggatatgtttttgtattaa SPP00000129_2.0 103 DGRALEGTLSELAAETD PVVFVK A E S+L+A T + + YWPAWE--FSDLSALTT L:V[gtg] VLKPLV KN979385.1:subs90325 ttcgtg ttgttgcaaGTGTGAGTC Intron 4 CAGGgtaccg agccga tcatcctcc <2-----[90372:106235-2> ttactt tgacgg tacaaccat tgaata SPP00000129_2.0 127 QRKIGGHGPTLK AYQEGRLQKLLKMN +R IGG + AYQEGRL+KLLKMN ERPIGGTERRSR AYQEGRLEKLLKMN KN979385.1:sub106255 gacaggagaaaaGTGAGTG Intron 5 CAGgtcggacgaccaaa agctggcagggg<0-----[106291:12589-0>caaaggtaattata agtttttggaca ttggcatagaaagc SPP00000129_2.0 153 GPEDLPKSYDYDLIIIGGGSGGLAAAKEA---- GPEDLP+SYDYDLIIIGGGSGGLAAAK GPEDLPESYDYDLIIIGGGSGGLAAAKARLLVL KN979385.1:sub125940 gcggccgttgtgcaaagggtggcgggagaccgt gcaatcacaaaattttgggcggtcccacgtttt ctgttcgccctctcctacccacgattgagcggg SPP00000129_2.0 182 QYGKKVMVLDFVTPTPLGTRW + GKKVMVLDFVTPTPLGTRW A:S[tcc] RCGKKVMVLDFVTPTPLGTRW KN979385.1:sub126039 TGTGTTGT Intron 6 CAGCCctgaagagcgtgacaccgaat <1-----[126040:12806-1> gggaattttattcccctgcgg atcggggcgctctccttatag SPP00000129_2.0 204 LGGTCVNVGCIPKKLMHQAALLG LGGTCVNVGCIPKKLMHQAALLG G:G[ggt] LGGTCVNVGCIPKKLMHQAALLG KN979385.1:sub128126 GGTAAGCT Intron 7 CAGGTcggatgaggtacaacaccggttg <1-----[128127:13059-1> tggcgtatggtcaattaaccttg caagtgtgtcataaggtaatgaa SPP00000129_2.0 228 QALQDSRNYGWKVEET KHDWDRM QALQDSRNYGWKVEET KHDWDRM QALQDSRNYGWKVEET V:V[gtt] KHDWDRM KN979385.1:sub130669 cgccgtcatgtagggaGGTATGAG Intron 8 CAGTTacgtgaa actaacgaaggataac <1-----[130718:13395-1> aaagagt acaactactagacgga gttgcag SPP00000129_2.0 252 IEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIK IEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIK IEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIK KN979385.1:sub133982 agggcacagttatgtcggccgaaggtgagtgctagccaaa tactaaatgctaggagtctgaaattaaacagattgcagta aatagtctctgtgccaaagggaatctgttcggttttcgtg SPP00000129_2.0 292 ATNNKGKEKIYSAERFLIATGERPRY ATNNKGKEKIYSAERFLIATGERPRY ATNNKGKEKIYSAERFLIATGERPRY KN979385.1:sub134102 GTAATTA Intron 9 TAGgaaaagagaattggatcagaggacct <0-----[134102:13450-0>ccaaagaaataccagtttccgagcga aattacaaattaagatctcttaaatc SPP00000129_2.0 318 LGIPGDKEYCIS DDLFSLPYCPG LGIPGDKEYCIS DDLFSLPYCPG LGIPGDKEYCIS S:S[agt] DDLFSLPYCPG KN979385.1:sub134588 tgacggagttaaAGGTAAAGA Intron 10 CAGTggctttcttcg tgtcgaaaagtg <2-----[134626:13643-2> aattctcagcg gccttcaacctc tttccgtccgt SPP00000129_2.0 342 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM KN979385.1:sub136474 aacggggttggtgtggtcggagtggagagataccagtgcgagaaaggca actttgccatctagcgttcgtgtatctttgctttggtaaatcaatgaat gcgctaactctggttattttttatcttgtgctttaatcgcgccattacg SPP00000129_2.0 391 EEHGIKFIRQFVPIK VEQIEAGTPGR EEHGIKFIRQFVPIK +EQIEAGTPGR EEHGIKFIRQFVPIK IEQIEAGTPGR KN979385.1:sub136621 ggcgaataactgcaaGTAAGTG Intron 11 CAGagcagggacgc aaagtattgattcta<0-----[136666:13959-0>taatacgccgg aatccgtaagtaata taataggaaca SPP00000129_2.0 417 LRVVAQSTNSEEIIEGEYNT VMLAIG LRVVAQSTNSEEIIEGEYNT V+LAIG LRVVAQSTNSEEIIEGEYNT VLLAIG KN979385.1:sub139633 cagggctaaaggaagggtaaGTAAGGA Intron 12 CAGgtcgag tgttcaccagaattagaaac<0-----[139693:14060-0>tttctg caaatgccttgactaagttg gggaaa SPP00000129_2.0 443 RDACTRKIGLETVGVKINE TGKI RDACTRKIGLETVGVKINE TGKI RDACTRKIGLETVGVKINE K:K[aag] TGKI KN979385.1:sub140627 aggtaaaagtgagggaaagAAGTAAGAA Intron 13 CAGGagaa gacgcgatgtactgtataa <2-----[140686:14176-2> cgat attcaaatcaatagggata taaa SPP00000129_2.0 467 PVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVK PVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVK PVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVK KN979385.1:sub141776 cgagggcaagctatgaggatggaggcacggacggatcgcactggtaga ctcaaaacatcatactgattaaatatcctctacggttcagtacgccta tcataagctgtcctctctaggtgggccatacgaaaggtggctatctcg SPP00000129_2.0 515 CDYENVPTTVFTPLEYGACGLSEEKA CDY+NVPTTVFTPLEYGACGLSEEKA CDYDNVPTTVFTPLEYGACGLSEEKA KN979385.1:sub141920 GTGAGTG Intron 14 CAGtgtgagcaagtactgtggtgctggag <0-----[141920:14539-0>gaaaatcccttcctaagcggtcaaac tctcttactatttgattttcttggat SPP00000129_2.0 541 VEKFGEENIE VYHSYFWPLEWTIPSR VEKFGEENIE VYHSYFWPLEWTIPSR VEKFGEENIE VYHSYFWPLEWTIPSR KN979385.1:sub145472 ggatgggaagGTGAGTT Intron 15 TAGgtcatttctgtaacta taatgaaata<0-----[145502:14838-0>taagatgctagctccg gggtgaattg tcttctgagaggtaaa SPP00000129_2.0 567 DNNKCYAKIICNTKDN ERVVGFHVLG DNNKCYAKIICNTKDN ERVVGFHVLG DNNKCYAKIICNTKDN ERVVGFHVLG KN979385.1:sub148436 gaaattgaaataaagaGTAAGTG Intron 16 TAGgcgggtcgcg aaaagacattgacaaa<0-----[148484:15102-0>agttgtattg tccattaaactttact attgctcagt SPP00000129_2.0 593 PNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAE PNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAE PNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAE KN979385.1:sub151056 caggggacgtgggcatgcaaaccgaaagaccgtgg cacgatcagtccctaggtcaaatagctgtactgca attaataaccatacatagcagggccgtacctctag SPP00000129_2.0 628 VFTTLSVTKRSGASILQAGC VFTTLSVTKRSGASILQAGC VFTTLSVTKRSGASILQAGC KN979385.1:sub151161 GTGGGTC Intron 17 CAGgtaattgaactggaaccggt <0-----[151161:16109-0>ttcctctcagcgcgttacgg acaagtgcgctgacccgtcc // Making a A in phase 1 intron Making a A in phase 1 intron Making a V in phase 2 intron Making a S in phase 1 intron Making a G in phase 1 intron Making a V in phase 1 intron Making a S in phase 2 intron Making a K in phase 2 intron >KN979385.1:subseq(15432774,201163).pep MGCAEGKAVAVAAPPELHTKGKNGGGRRRSAKDHHPGKTLPENPTGFTSTATTDLRALLQ AYIDGHSVVIFSRSTCTRCAEVKKLFKSLCVPYFVLELDQTAYWPAWEFSDLSALTTVVL KPLVERPIGGTERRSRAYQEGRLEKLLKMNGPEDLPESYDYDLIIIGGGSGGLAAAKARL LVLSRCGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGW KVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGK EKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGF LAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKIEQIEAGTPGRLR VVAQSTNSEEIIEGEYNTVLLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPY IYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYDNVPTTVFTPLEYGACGLSEE KAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEV TQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTLSVTKRSGASILQAGC // >KN979385.1:subseq(15432774,201163).[2393:161157].sp ATGGGCTGCGCGGAGGGCAAGGCGGTGGCGGTAGCCGCCCCACCGGAGCTGCACACCAAA GGCAAGAACGGTGGTGGCCGCCGTAGGTCAGCTAAAGATCATCACCCTGGTAAAACTTTG CCAGAGAACCCAACAGGATTCACCAGCACGGCCACTACAGACCTCAGAGCCCTGCTTCAG GCCTATATAGACGGTCACTCTGTGGTCATCTTCAGTAGGTCCACATGCACACGCTGTGCT GAGGTAAAGAAGTTATTTAAATCTCTGTGTGTTCCTTATTTTGTGCTTGAACTTGATCAA ACAGCCTATTGGCCAGCCTGGGAGTTTTCAGACTTATCAGCCCTCACAACTGTGGTTTTG AAACCACTTGTAGAAAGGCCTATTGGTGGTACTGAGAGGAGAAGCAGAGCTTATCAGGAG GGCAGACTTGAAAAGCTACTAAAAATGAACGGCCCTGAGGATCTTCCCGAGTCCTACGAC TATGACCTTATCATCATTGGAGGCGGCTCCGGAGGCCTGGCAGCTGCTAAGGCAAGGCTC CTGGTGTTGTCCCGATGTGGCAAGAAGGTGATGGTCCTGGACTTTGTCACTCCCACCCCT CTTGGAACTAGATGGGGTCTCGGAGGAACGTGTGTGAATGTGGGTTGCATACCTAAAAAA CTGATGCATCAAGCAGCTTTGTTAGGACAAGCCCTACAAGACTCTCGAAACTATGGATGG AAAGTCGAGGAGACAGTTAAGCATGATTGGGACAGAATGATAGAAGCTGTACAGAATCAC ATTGGCTCTTTGAATTGGGGCTACCGAGTAGCACTGCGGGAGAAAAAAGTTGTCTATGAG AATGCTTACGGGCAGTTTATTGGTCCTCACAGGATTAAGGCAACAAATAATAAAGGCAAA GAAAAAATTTATTCAGCAGAGAGATTTCTCATTGCCACTGGTGAAAGACCACGTTACTTG GGCATCCCTGGTGACAAAGAATACTGCATTAGCAGTGATGATCTTTTCTCCTTGCCTTAC TGCCCGGGTAAGACCCTGGTCGTTGGAGCATCCTATGTCGCTTTGGAGTGTGCTGGATTT CTTGCTGGTATTGGTTTAGATGTCACTGTTATGGTTAGGTCCATTCTTCTTAGAGGATTT GACCAGGACATGGCCAACAAAATTGGTGAACACATGGAAGAACATGGCATCAAGTTTATA AGACAGTTTGTACCAATTAAAATTGAACAAATTGAAGCGGGGACACCAGGCCGACTCAGA GTAGTAGCTCAGTCCACCAATAGTGAGGAAATCATTGAAGGAGAGTATAATACGGTGTTG CTGGCAATAGGAAGAGATGCTTGCACAAGAAAAATTGGCTTAGAAACTGTAGGGGTGAAG ATAAATGAAAAGACTGGAAAAATACCTGTCACAGATGAAGAACAGACCAATGTGCCTTAC ATCTATGCCATTGGCGATATATTGGAGGATAAGGTGGAGCTCACCCCAGTTGCAATCCAG GCAGGAAGATTGCTGGCTCAGAGGCTCTATGCAGGTTCCACTGTCAAGTGTGACTATGAC AATGTTCCAACCACTGTATTTACTCCTTTGGAATATGGTGCTTGTGGCCTTTCTGAGGAG AAAGCTGTGGAGAAGTTTGGGGAAGAAAATATTGAGGTTTACCATAGTTACTTTTGGCCA TTGGAATGGACGATTCCATCAAGAGATAACAACAAATGTTATGCAAAAATAATCTGTAAT ACTAAAGACAATGAACGTGTTGTGGGCTTTCACGTACTGGGTCCAAATGCTGGAGAAGTT ACACAAGGCTTCGCAGCTGCACTCAAATGTGGACTGACCAAAAAGCAGCTGGACAGCACG ATTGGAATCCACCCTGTCTGTGCAGAGGTATTCACAACATTGTCTGTGACCAAGCGCTCT GGGGCAAGCATCCTCCAGGCTGGCTGC // KN979385.1:subseq(15432774,201163) GeneWise match 2393 161157 1172.13 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 2393 2483 0.00 + 0 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 2484 50000 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 50001 50152 0.00 + 2 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 50153 56338 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 56339 56399 0.00 + 0 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 56400 90322 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 90323 90371 0.00 + 2 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 90372 106235 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 106236 106290 0.00 + 1 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 106291 125897 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 125898 126039 0.00 + 0 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 126040 128060 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 128061 128126 0.00 + 2 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 128127 130597 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 130598 130717 0.00 + 2 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 130718 133958 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 133959 134101 0.00 + 2 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 134102 134509 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 134510 134625 0.00 + 0 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 134626 136439 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 136440 136665 0.00 + 1 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 136666 139599 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 139600 139692 0.00 + 0 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 139693 140608 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 140609 140685 0.00 + 0 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 140686 141762 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 141763 141919 0.00 + 1 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 141920 145393 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 145394 145501 0.00 + 0 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 145502 148387 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 148388 148483 0.00 + 0 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 148484 151025 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 151026 151160 0.00 + 0 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise intron 151161 161097 0.00 + . KN979385.1:subseq(15432774,201163)-genewise-prediction-1 KN979385.1:subseq(15432774,201163) GeneWise cds 161098 161157 0.00 + 0 KN979385.1:subseq(15432774,201163)-genewise-prediction-1 //