genewise output
Score 388.33 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000106_2.0    1 MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQI     
                     MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQI     
                     MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQI     
KN983522.1:subs50000 aaccccccgggtgagcaggtgacgggcaaataactgagcccatca     
                     tgtttttttccccttggacccatggtcgagtataaccgcttatat     
                     ggtggtcaggggggcgtgcgctgccgccgaagggccggggcgcgt     


SPP00000106_2.0   46                           VSUGYRRVFEEYMRVISQRYPDI 
                                               VS GYRRVFEEYMRVISQRYPDI 
                                C:C[tgt]       VSXGYRRVFEEYMRVISQRYPDI 
KN983522.1:subs50135 TGGTGAGTA  Intron 1   CAGTgttgtacgtggtacgaacctcga 
                       <2-----[50137:75372]-2> tcggaggttaaatgttgagacat 
                                               ccattgggtggcggtccggcacc 


SPP00000106_2.0   70 RIEGENYLPQPIY                          HIASFLSVFK 
                     RIEGENYLPQPIY                          HIASFLSVFK 
                     RIEGENYLPQPIY           R:R[aga]       HIASFLSVFK 
KN983522.1:subs75443 cagggatccccatAGGTAAGAA  Intron 2   TAGAcagttctgta 
                     gtagaaatcacta  <2-----[75484:76312]-2> atccttctta 
                     ctaagtcctaaat                          caatcaacca 


SPP00000106_2.0   94 LVLIGLIIVGKDPFAFFGMQAPSIWQWGQENK                  
                     LVLIGLIIVGKDPFAFFGMQAPSIWQWGQENK                  
                     LVLIGLIIVGKDPFAFFGMQAPSIWQWGQENK                  
KN983522.1:subs76344 cgtagtaaggagctgttgacgcaatctgcgaa                  
                     ttttgttttgaactcttgtaccgtgaggaaaa                  
                     aaaacaattcgttttctcgattccgggcaatg                  


SPP00000106_2.0  126                        VYACMMVFFLSNMIENQCMSTGAFEI 
                                            VYACMMVFFLSNMIENQCMSTGAFEI 
                                            VYACMMVFFLSNMIENQCMSTGAFEI 
KN983522.1:subs76440 GTATGTA  Intron 3   TAGgtgtaagtttaaaagactataggtga 
                     <0-----[76440:78038]-0>tacgttttttgattaaagtccgctat 
                                            ctatggtccgccgtgcgtgaatatga 


SPP00000106_2.0  152 TLN                          VPVWSKLESGHLPSMQQLVQ 
                     TLN                          VPVWSKLESGHLPSMQQLVQ 
                     TLN          D:D[gat]        VPVWSKLESGHLPSMQQLVQ 
KN983522.1:subs78117 ataGGTAGGTT  Intron 4   TAGATgcgttacgtgccctacccgc 
                     cta <1-----[78127:80409]-1>  tctgcatacgatcctaatta 
                     tat                          atggtggattttacgaatta 


SPP00000106_2.0  176 ILDNEMKLNVHMDSIPHHRS                              
                     ILDNEMKLNVHMDSIPHHRS                              
                     ILDNEMKLNVHMDSIPHHRS                              
KN983522.1:subs80472 acgagaacagcagtacccct                              
                     ttaaatatatatactcaagc                              
                     ttctaggctgtgtacactaa                              


//
Making a C in phase 2 intron
Making a R in phase 2 intron
Making a D in phase 1 intron
>KN983522.1:subseq(4011012,130531).pep
MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQICVSXGYRRVFEEYMR
VISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQW
GQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNE
MKLNVHMDSIPHHRS
//
>KN983522.1:subseq(4011012,130531).[50000:80531].sp
ATGAGGCTTCTGCTGCTTCTCCTAGTGGCGGCGTCGGCGATGGTCCGGAGTGAGGCCTCG
GCCAATCTGGGCGGCGTGCCCAGCAAGAGATTAAAGATGCAGTACGCCACGGGGCCGCTG
CTCAAGTTCCAGATTTGTGTCTCCTGAGGTTATAGGCGGGTGTTTGAGGAGTACATGCGG
GTTATCAGCCAGCGGTACCCAGACATCCGCATTGAAGGAGAGAATTACCTCCCTCAACCA
ATATATAGACACATAGCATCTTTCCTATCAGTCTTCAAACTAGTATTAATAGGCTTAATA
ATTGTTGGCAAGGATCCTTTTGCTTTCTTTGGCATGCAAGCTCCTAGCATCTGGCAGTGG
GGCCAAGAAAATAAGGTCTATGCATGTATGATGGTTTTCTTCTTGAGCAACATGATTGAG
AACCAGTGTATGTCAACAGGTGCATTTGAGATAACTTTAAATGATGTACCTGTGTGGTCT
AAGCTGGAATCTGGTCATCTTCCATCCATGCAACAACTTGTTCAAATTCTTGACAATGAA
ATGAAGCTCAATGTGCATATGGATTCAATCCCACACCATCGATCA
//
KN983522.1:subseq(4011012,130531)	GeneWise	match	50000	80531	388.33	+	.	KN983522.1:subseq(4011012,130531)-genewise-prediction-1
KN983522.1:subseq(4011012,130531)	GeneWise	cds	50000	50136	0.00	+	0	KN983522.1:subseq(4011012,130531)-genewise-prediction-1
KN983522.1:subseq(4011012,130531)	GeneWise	intron	50137	75372	0.00	+	.	KN983522.1:subseq(4011012,130531)-genewise-prediction-1
KN983522.1:subseq(4011012,130531)	GeneWise	cds	75373	75483	0.00	+	1	KN983522.1:subseq(4011012,130531)-genewise-prediction-1
KN983522.1:subseq(4011012,130531)	GeneWise	intron	75484	76312	0.00	+	.	KN983522.1:subseq(4011012,130531)-genewise-prediction-1
KN983522.1:subseq(4011012,130531)	GeneWise	cds	76313	76439	0.00	+	1	KN983522.1:subseq(4011012,130531)-genewise-prediction-1
KN983522.1:subseq(4011012,130531)	GeneWise	intron	76440	78038	0.00	+	.	KN983522.1:subseq(4011012,130531)-genewise-prediction-1
KN983522.1:subseq(4011012,130531)	GeneWise	cds	78039	78126	0.00	+	0	KN983522.1:subseq(4011012,130531)-genewise-prediction-1
KN983522.1:subseq(4011012,130531)	GeneWise	intron	78127	80409	0.00	+	.	KN983522.1:subseq(4011012,130531)-genewise-prediction-1
KN983522.1:subseq(4011012,130531)	GeneWise	cds	80410	80531	0.00	+	2	KN983522.1:subseq(4011012,130531)-genewise-prediction-1
//