genewise output
Score 270.85 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000067_2.0    1 MAAGPSGCLVPAFGLRLLLATVLQA                       V 
                     MAAG SG LVP FGLRLLLATVLQA                       V 
                     MAAGLSGGLVPTFGLRLLLATVLQA                       V 
KN982784.1:subs50000 agggcaggcgcatgcctttgagccgGTGAGTA  Intron 1   CAGg 
                     tccgtgggttcctgtgtttccttac<0-----[50075:60463]-0>t 
                     ggtggtggggggtgagggggtgtag                       t 


SPP00000067_2.0   27 SAFGAEFSSEACRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEA 
                     SAFGAEFSSEACRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEA 
                     SAFGAEFSSEACRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEA 
KN982784.1:subs60467 tgtgggtttggtagtgttaatctattgccgctaccccgcgtagttcggg 
                     cctgcatccacggatgtcgattggcgattgatattatacagggggaaac 
                     tttgagtaagacagacttccgcccttttcagccgtggtttcaactggaa 


SPP00000067_2.0   76 QFETKK                       LYAGAILEVCGUKLGRFPQV 
                     QFETKK                       LYAGAILEVCG KLGRFPQV 
                     QFETKK                       LYAGAILEVCGXKLGRFPQV 
KN982784.1:subs60614 ctgaaaGTACTGT  Intron 2   TAGctgggacggtgtatgatccg 
                     atacaa<0-----[60632:82065]-0>tacgcttatgggatggtcat 
                     atacag                       gtaatttattaaagagctac 


SPP00000067_2.0  102 Q                          FVRSDKPKLFRGLQIK       
                     Q                          FVRSDKPKLFRGLQIK       
                     Q          A:A[gct]        FVRSDKPKLFRGLQIK       
KN982784.1:subs82126 cGGTATATA  Intron 3   AAGCTtgaagacattagccaa       
                     a <1-----[82130:94889]-1>  ttggaacattggtata       
                     a                          ctgttacagcaaaaag       


SPP00000067_2.0  120                        YVRGSDPVLKLLDDNGNIAEELSILK 
                                            YVRGSDPVLKLLDDNGNIAEELSILK 
                                            YVRGSDPVLKLLDDNGNIAEELSILK 
KN982784.1:subs94940 GTAAGGT  Intron 4   TAGtgcgtgcgtactggagaagggcaaca 
                     <0-----[94940:99527]-0>atggcacttattaaagatcaatgtta 
                                            tcttactaagtgtctgcttaaactca 


SPP00000067_2.0  146 WNTDSVEEFLSEKLERI                                 
                     WNTDSVEEFLSEKLERI                                 
                     WNTDSVEEFLSEKLERI                                 
KN982784.1:subs99606 taagagggtcagatgca                                 
                     gacagtaattgaatagt                                 
                     gcactaaacgtaggaca                                 


//
Making a A in phase 1 intron
>KN982784.1:subseq(4648392,149656).pep
MAAGLSGGLVPTFGLRLLLATVLQAVSAFGAEFSSEACRELGFSSNLLCSSCDLLGQFNL
LQLDPDCRGCCQEEAQFETKKLYAGAILEVCGXKLGRFPQVQAFVRSDKPKLFRGLQIKY
VRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKLERI
//
>KN982784.1:subseq(4648392,149656).[50000:99656].sp
ATGGCGGCTGGGCTGAGTGGGGGGCTGGTGCCGACGTTTGGGCTACGGTTGTTGTTGGCG
ACTGTGCTTCAAGCGGTTTCTGCTTTTGGGGCAGAGTTTTCATCAGAGGCATGCAGAGAG
TTAGGCTTTTCTAGCAACTTGCTCTGCAGCTCTTGTGATCTTCTCGGACAGTTCAACCTG
CTTCAGCTGGATCCTGATTGCAGAGGATGCTGTCAGGAGGAAGCACAATTTGAAACCAAA
AAGCTGTATGCAGGAGCTATTCTTGAAGTTTGTGGATGAAAATTGGGAAGGTTCCCTCAA
GTCCAAGCTTTCGTTAGGAGTGATAAACCCAAATTGTTCAGAGGACTACAAATAAAGTAT
GTCCGTGGTTCAGACCCTGTATTAAAGCTTTTGGATGACAATGGGAACATTGCTGAAGAA
CTAAGCATTCTCAAATGGAACACAGACAGTGTAGAAGAATTCCTGAGTGAAAAGTTGGAA
CGCATA
//
KN982784.1:subseq(4648392,149656)	GeneWise	match	50000	99656	270.85	+	.	KN982784.1:subseq(4648392,149656)-genewise-prediction-1
KN982784.1:subseq(4648392,149656)	GeneWise	cds	50000	50074	0.00	+	0	KN982784.1:subseq(4648392,149656)-genewise-prediction-1
KN982784.1:subseq(4648392,149656)	GeneWise	intron	50075	60463	0.00	+	.	KN982784.1:subseq(4648392,149656)-genewise-prediction-1
KN982784.1:subseq(4648392,149656)	GeneWise	cds	60464	60631	0.00	+	0	KN982784.1:subseq(4648392,149656)-genewise-prediction-1
KN982784.1:subseq(4648392,149656)	GeneWise	intron	60632	82065	0.00	+	.	KN982784.1:subseq(4648392,149656)-genewise-prediction-1
KN982784.1:subseq(4648392,149656)	GeneWise	cds	82066	82129	0.00	+	0	KN982784.1:subseq(4648392,149656)-genewise-prediction-1
KN982784.1:subseq(4648392,149656)	GeneWise	intron	82130	94889	0.00	+	.	KN982784.1:subseq(4648392,149656)-genewise-prediction-1
KN982784.1:subseq(4648392,149656)	GeneWise	cds	94890	94939	0.00	+	2	KN982784.1:subseq(4648392,149656)-genewise-prediction-1
KN982784.1:subseq(4648392,149656)	GeneWise	intron	94940	99527	0.00	+	.	KN982784.1:subseq(4648392,149656)-genewise-prediction-1
KN982784.1:subseq(4648392,149656)	GeneWise	cds	99528	99656	0.00	+	0	KN982784.1:subseq(4648392,149656)-genewise-prediction-1
//