genewise output Score 240.98 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000054_2.0 442 KKSQLPVQLDLGGMLTALEKKQHSQHAKQ--SSKPVVVS KK++ PVQLDLG ML ALEK+Q + A+Q ++P+ + KKNKTPVQLDLGDMLAALEKQQQAMKARQITNTRPLSYT KN985744.1:sub-66838 aaaaacgccgtggatggcgacccgaagccaaaaacctta aaaacctatatgattcctaaaaactacgatcacgctcac agtaatggatggcgattgaaagaagaagattccatgata SPP00000054_2.0 479 VGAVPVLSKECASGERGRRMSQM V A +K+ + + + -:V[gtg] VTAASFHTKDSTNRKPLTKSQPC KN985744.1:sub-66721 GGTGATGT Intron 1 TAGTGgaggttcaagtaaaactaaacct <1-----[66720:62940]-1> tcccctacaaccagactcagacg ttatttctactttaatacatgct SPP00000054_2.0 502 KTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKK T N +D ++ KKGK++EI K K+PT+LKK LTSFNSVDIASSKAKKGKEKEIAKLKRPTALKK KN985744.1:sub-62868 tattatggagttagaagagagagacaccagcaa tcctactatcccacaagaaaatcatagccctaa gactttgcttttaaaaaaggaaaaaaacgatag SPP00000054_2.0 535 IILKERQERKQRLQENAVSPAFTSDD +ILKER+E+K RL + + S++ VILKEREEKKGRLTVD--HNLLGSEE KN985744.1:sub-62769 GTAAACC Intron 2 TAGgatagaggaagctagg cactgtgg <0-----[62769:61991]-0>tttaagaaaaggtcta aattgcaa ttaaaagagggcatgc tttgatga SPP00000054_2.0 561 TQDGESGGDDQFPEQAELSG EGM + D +P++ G+ PTEMHLDFIDDLPQEIVSQE P:D[gat] TGL KN985744.1:sub-61918 cagactgtaggtccgagtcgGGTAAGGA Intron 3 CAGATagc ccatatattaatcaattcaa <1-----[61857:59496]-1> cgt aaagcatttttgaggttcga tag SPP00000054_2.0 585 DELISTPSVEDKSEEPPG--TELQRDTEASHLAPN---HTTFPKIHSRR + S S+ S+ P T + + + AS + +T+ KIHS+R S-MPSDTSLSPASQNSPYCMTPVSQGSPASSGIGSPMASSTITKIHSKR KN985744.1:sub-59484 a acagatctcgacatcttaacgtcgtcgatgagacagttaaaaacaaa g tcgacctcccgaaccagtcctcagcccgcgtggctcccctcatagag c gctttactaatgctactgatgaactatttaactagataaacacccaa SPP00000054_2.0 629 FR YCSQMLSKEVDACVTDLLKEL FR YC+Q+L KE+D CVT LL+EL FR D:E[gag] YCNQVLCKEIDECVTLLLQEL KN985744.1:sub-59340 taGAGTAAGTT Intron 4 CAGGttacgctagaggtgaccccgc tg <2-----[59332:51256]-2> agaattgaataagtctttaat ta tttgtttagttatgtttcagt SPP00000054_2.0 653 VRFQDRMYQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCVIISPNCEKI V FQ+R+YQKDPV+AK +RRLV+GLREV KH+KL K+KCVIISPNCEKI VSFQERIYQKDPVRAKARRRLVMGLREVTKHMKLNKIKCVIISPNCEKI KN985744.1:sub-51191 gatcgcatcagcgagagaaccgagcaggaacaataaaatgaatcatgaa tgtaagtaaaactgcacgggtttgtgatcaatataatagtttccagaat ctcgacccaattgaaaagaactgtaaatcatggacgcgttattactaac SPP00000054_2.0 702 QSK GLDDTLHTIIDYACEQNIPF QSK GLD+ L+ +I A EQ IPF QSK G:G[ggt] GLDEALYNVIAMAREQEIPF KN985744.1:sub-51044 ctaGGTATGCG Intron 5 CAGGTgcgggctagagagcgcgact aca <1-----[51034:50155]-1> gtaactaattctcgaaatct gaa tatgtctttacgagaaattt SPP00000054_2.0 726 VFALNRKALGRSLNKAVPVSVVGIFSYDGAQ VFAL RKALGR +NK VPVSVVGIF+Y GA+ VFALGRKALGRCVNKLVPVSVVGIFNYFGAE KN985744.1:sub-50092 gtgcgaagcgctgaacgcgagggatattggg ttctggactgggtaattctgttgttaatgca gtctagataactgcggtttcagacccctttg SPP00000054_2.0 757 DQFHKMVELTVAARQAYKTMLENVQQ F+K+VELT AR+AYK M+ ++Q SLFNKLVELTEEARKAYKDMVAAMEQ KN985744.1:sub-49999 GTAAGAA Intron 6 CAGactaatggcagggaagtagagggagc <0-----[49999:46758]-0>gttaattatcaacgacaaattcctaa cgttgaaactgacgaatatgtaagag SPP00000054_2.0 783 E E E KN985744.1:sub-46679 g a g // Making a V in phase 1 intron Making a D in phase 1 intron Making a E in phase 2 intron Making a G in phase 1 intron >KN985744.1:subseq(4079265,101254).pep KKNKTPVQLDLGDMLAALEKQQQAMKARQITNTRPLSYTVVTAASFHTKDSTNRKPLTKS QPCLTSFNSVDIASSKAKKGKEKEIAKLKRPTALKKVILKEREEKKGRLTVDHNLLGSEE PTEMHLDFIDDLPQEIVSQEDTGLSMPSDTSLSPASQNSPYCMTPVSQGSPASSGIGSPM ASSTITKIHSKRFREYCNQVLCKEIDECVTLLLQELVSFQERIYQKDPVRAKARRRLVMG LREVTKHMKLNKIKCVIISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALGR CVNKLVPVSVVGIFNYFGAESLFNKLVELTEEARKAYKDMVAAMEQE // >KN985744.1:subseq(4079265,101254).[66838:46675].sp AAAAAGAATAAAACACCTGTGCAGCTAGATTTGGGGGACATGTTAGCTGCTCTGGAAAAA CAACAGCAAGCAATGAAAGCACGGCAAATTACTAACACCAGACCTCTGTCATATACAGTG GTTACTGCAGCTTCTTTTCACACTAAAGACTCTACTAATAGAAAACCTTTAACCAAAAGT CAGCCCTGTTTGACATCCTTTAATTCTGTGGACATTGCTTCTTCTAAAGCAAAAAAAGGA AAAGAGAAGGAAATAGCAAAACTAAAACGACCCACGGCACTTAAAAAGGTTATTTTAAAA GAAAGAGAGGAAAAGAAGGGGCGCTTAACTGTGGACCATAATCTTTTGGGATCTGAGGAA CCAACAGAAATGCACTTAGATTTTATTGATGATTTGCCACAGGAGATTGTTTCCCAGGAA GATACTGGACTGAGCATGCCCAGTGATACTTCACTCTCTCCAGCAAGTCAGAACTCTCCA TACTGTATGACACCTGTGTCACAAGGCTCTCCAGCTAGTTCTGGAATAGGCAGTCCAATG GCATCTTCAACAATAACCAAAATCCACAGCAAAAGATTTAGAGAGTATTGTAATCAGGTT CTTTGTAAAGAGATTGATGAATGTGTGACTCTTCTTCTCCAAGAGCTTGTCAGTTTCCAG GAACGCATCTACCAAAAAGATCCTGTGAGAGCAAAAGCAAGGAGACGACTCGTTATGGGT CTAAGAGAAGTTACCAAACATATGAAGTTAAACAAGATCAAGTGTGTTATAATTTCTCCA AACTGTGAAAAAATCCAGTCAAAAGGTGGTCTAGATGAGGCTCTCTATAATGTTATAGCC ATGGCACGGGAACAAGAAATTCCTTTTGTGTTTGCCCTTGGAAGGAAAGCTCTAGGACGC TGTGTGAACAAGCTGGTTCCTGTTAGCGTAGTGGGAATCTTCAACTACTTTGGTGCTGAG AGCCTGTTTAATAAGTTAGTAGAACTCACTGAGGAAGCCAGGAAAGCATATAAAGATATG GTTGCAGCAATGGAACAGGAG // KN985744.1:subseq(4079265,101254) GeneWise match 66838 46677 245.97 - . KN985744.1:subseq(4079265,101254)-genewise-prediction-1 KN985744.1:subseq(4079265,101254) GeneWise cds 66838 66721 0.00 - 0 KN985744.1:subseq(4079265,101254)-genewise-prediction-1 KN985744.1:subseq(4079265,101254) GeneWise intron 66720 62940 0.00 - . KN985744.1:subseq(4079265,101254)-genewise-prediction-1 KN985744.1:subseq(4079265,101254) GeneWise cds 62939 62770 0.00 - 2 KN985744.1:subseq(4079265,101254)-genewise-prediction-1 KN985744.1:subseq(4079265,101254) GeneWise intron 62769 61991 0.00 - . KN985744.1:subseq(4079265,101254)-genewise-prediction-1 KN985744.1:subseq(4079265,101254) GeneWise cds 61990 61858 0.00 - 0 KN985744.1:subseq(4079265,101254)-genewise-prediction-1 KN985744.1:subseq(4079265,101254) GeneWise intron 61857 59496 0.00 - . KN985744.1:subseq(4079265,101254)-genewise-prediction-1 KN985744.1:subseq(4079265,101254) GeneWise cds 59495 59333 0.00 - 2 KN985744.1:subseq(4079265,101254)-genewise-prediction-1 KN985744.1:subseq(4079265,101254) GeneWise intron 59332 51256 0.00 - . KN985744.1:subseq(4079265,101254)-genewise-prediction-1 KN985744.1:subseq(4079265,101254) GeneWise cds 51255 51035 0.00 - 1 KN985744.1:subseq(4079265,101254)-genewise-prediction-1 KN985744.1:subseq(4079265,101254) GeneWise intron 51034 50155 0.00 - . KN985744.1:subseq(4079265,101254)-genewise-prediction-1 KN985744.1:subseq(4079265,101254) GeneWise cds 50154 50000 0.00 - 2 KN985744.1:subseq(4079265,101254)-genewise-prediction-1 KN985744.1:subseq(4079265,101254) GeneWise intron 49999 46758 0.00 - . KN985744.1:subseq(4079265,101254)-genewise-prediction-1 KN985744.1:subseq(4079265,101254) GeneWise cds 46757 46677 0.00 - 0 KN985744.1:subseq(4079265,101254)-genewise-prediction-1 //