genewise output
Score 475.48 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000021_2.0    1 MARLLQASCLLSLLLAGFVSQSRGQEKSK                     
                     MARLLQASCLLSLLLAGF+ QSRGQEKSK                     
                     MARLLQASCLLSLLLAGFLPQSRGQEKSK                     
KN985879.1:subs45329 agccccgttcctcccggtcccacgcgataGTGAGTG  Intron 1    
                     tcgttaccgttctttcgttcagggaaaca<0-----[45416:50002] 
                     gcgggggccgccgcgccccggcgaagggg                     


SPP00000021_2.0   30    MDCHGGISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGL 
                        MDCHGG+SGTIYEYGALTIDGEEYIPFKQY GKYVLFVNVA+Y GL 
                        MDCHGGMSGTIYEYGALTIDGEEYIPFKQYTGKYVLFVNVATYXGL 
KN985879.1:subs50000 CAGagtcggaagaatgtggcaaggggtactactagatgctgaggattgc 
                     -0>tagaggtggctaaagctctagaaatctaaacgaattttatccaggt 
                        gccttcgtcctcgcacccttgggccccggctcaccctccgcccacg 


SPP00000021_2.0   76 TGQYI                          LNALQEELAPFGLVILGF 
                     TGQYI                          LNALQEELAPFGLVILGF 
                     TGQYI          E:E[gaa]        LNALQEELAPFGLVILGF 
KN985879.1:subs50141 agctaGGTAAGAG  Intron 2   CAGAAcagccggcgctgcgacgt 
                     cgaat <1-----[50157:51563]-1>  tactaaatcctgttttgt 
                     gcgct                          gtaagagtagctcctcct 


SPP00000021_2.0  100 PCNQFGKQEPGENSEILPTL                          YVR 
                     PCNQFGKQEPGENSEILP+L                          YVR 
                     PCNQFGKQEPGENSEILPSL           K:K[aag]       YVR 
KN985879.1:subs51620 ctactgacgcggatgaccacAAGTGAGTG  Intron 3   CAGGtgc 
                     cgaatgaaacgaacattcgt  <2-----[51682:52102]-2> atg 
                     cccataagaacgcagctccc                          tca 


SPP00000021_2.0  124 PGGGFVPNFQLFEKGDVNGEKEQKFYTFLK                    
                     PGGGFVPNFQLFEKGDVNGEKEQKFYTFLK                    
                     PGGGFVPNFQLFEKGDVNGEKEQKFYTFLK                    
KN985879.1:subs52113 cgggtgcatcctgagggaggagcattatca                    
                     cgggttcatattaagatagaaaaatactta                    
                     atactcttcgctgagtgtagaggacctcag                    


SPP00000021_2.0  154                        NSCPPTSELLGTSDRLFWEPMKVHDI 
                                            NSCPPTSELLGTSDRLFWEPMKVHDI 
                                            NSCPPTSELLGTSDRLFWEPMKVHDI 
KN985879.1:subs52203 GTGAGTG  Intron 4   TAGattccatgccgatgccttgcaagcga 
                     <0-----[52203:52589]-0>acgccccattgccagttgactataat 
                                            ccttccggcgtatccctgacggcccc 


SPP00000021_2.0  180 RWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRRQAALGVKRK   
                     RWNFEKFLVGPDGIPIMRWHHRTT+SNVKMDILSYMRRQAALG+KRK   
                     RWNFEKFLVGPDGIPIMRWHHRTTISNVKMDILSYMRRQAALGLKRK   
KN985879.1:subs52668 ctatgatcggcggacaactcccaaaaagaagacttaaccggcgcaaa   
                     ggataatttgcagtcttggaagcctgatatattcatggacctgtaga   
                     cgctggcgggattatcgcgccgcgccccggccgccggggacggcggg   


//
Making a E in phase 1 intron
Making a K in phase 2 intron
>KN985879.1:subseq(5311955,102808).pep
MARLLQASCLLSLLLAGFLPQSRGQEKSKMDCHGGMSGTIYEYGALTIDGEEYIPFKQYT
GKYVLFVNVATYXGLTGQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPSLK
YVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIR
WNFEKFLVGPDGIPIMRWHHRTTISNVKMDILSYMRRQAALGLKRK
//
>KN985879.1:subseq(5311955,102808).[45329:52808].sp
ATGGCCCGGCTGCTGCAGGCGTCCTGCCTGCTCTCCCTGCTCCTGGCCGGCTTCCTCCCG
CAGAGCCGGGGACAAGAGAAGTCGAAGATGGACTGCCATGGTGGCATGAGTGGCACCATT
TACGAGTACGGAGCCCTCACCATTGATGGGGAGGAGTACATCCCCTTCAAGCAGTACACT
GGCAAATACGTCCTCTTTGTCAACGTGGCCACCTACTGAGGCCTGACGGGCCAGTACATT
GAACTGAATGCACTACAGGAAGAGCTTGCACCGTTCGGTCTCGTCATTCTCGGCTTTCCC
TGCAACCAATTTGGAAAACAGGAACCAGGCGAGAACTCAGAGATCCTTCCCAGCCTCAAG
TATGTCCGACCAGGTGGAGGCTTTGTCCCTAATTTCCAGCTCTTTGAGAAAGGGGATGTG
AATGGAGAGAAAGAGCAGAAATTCTACACTTTCCTAAAGAACTCCTGTCCTCCCACCTCG
GAGCTCCTGGGTACATCTGACCGCCTCTTTTGGGAACCCATGAAGGTCCACGACATCCGC
TGGAACTTTGAGAAGTTCCTGGTGGGGCCAGATGGTATACCTATCATGCGCTGGCACCAC
CGGACCACGATCAGCAACGTCAAGATGGACATCCTGTCCTACATGAGGCGGCAGGCAGCC
CTGGGGCTCAAGAGGAAG
//
KN985879.1:subseq(5311955,102808)	GeneWise	match	45329	52808	475.48	+	.	KN985879.1:subseq(5311955,102808)-genewise-prediction-1
KN985879.1:subseq(5311955,102808)	GeneWise	cds	45329	45415	0.00	+	0	KN985879.1:subseq(5311955,102808)-genewise-prediction-1
KN985879.1:subseq(5311955,102808)	GeneWise	intron	45416	50002	0.00	+	.	KN985879.1:subseq(5311955,102808)-genewise-prediction-1
KN985879.1:subseq(5311955,102808)	GeneWise	cds	50003	50156	0.00	+	0	KN985879.1:subseq(5311955,102808)-genewise-prediction-1
KN985879.1:subseq(5311955,102808)	GeneWise	intron	50157	51563	0.00	+	.	KN985879.1:subseq(5311955,102808)-genewise-prediction-1
KN985879.1:subseq(5311955,102808)	GeneWise	cds	51564	51681	0.00	+	2	KN985879.1:subseq(5311955,102808)-genewise-prediction-1
KN985879.1:subseq(5311955,102808)	GeneWise	intron	51682	52102	0.00	+	.	KN985879.1:subseq(5311955,102808)-genewise-prediction-1
KN985879.1:subseq(5311955,102808)	GeneWise	cds	52103	52202	0.00	+	1	KN985879.1:subseq(5311955,102808)-genewise-prediction-1
KN985879.1:subseq(5311955,102808)	GeneWise	intron	52203	52589	0.00	+	.	KN985879.1:subseq(5311955,102808)-genewise-prediction-1
KN985879.1:subseq(5311955,102808)	GeneWise	cds	52590	52808	0.00	+	0	KN985879.1:subseq(5311955,102808)-genewise-prediction-1
//